Guide to the Human Genome
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Name: RAB23 Sequence: fasta or formatted (237aa) NCBI GI: 34485714
Description:

Ras-related protein Rab-23

Referenced in:

Rab

Other entries for this name:
alt mRNA [237aa] Ras-related protein Rab-23
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         14           1
 C cysteine            1.7          4           1
 D aspartate           6.3         15           2
 E glutamate           8.0         19           2
 F phenylalanine       3.8          9           1
 G glycine             6.3         15           2
 H histidine           0.8          2           1
 I isoleucine          5.5         13           1
 K lysine              8.9         21           2
 L leucine             7.6         18           2
 M methionine          2.1          5           1
 N asparagine          5.9         14           1
 P proline             2.1          5           1
 Q glutamine           4.6         11           2
 R arginine            5.1         12           1
 S serine              7.6         18           3
 T threonine           5.1         12           2
 V valine              8.9         21           3
 W tryptophan          0.8          2           1
 Y tyrosine            3.0          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-related protein Rab-23 
RAB23                 1.000   Ras-related protein Rab-23 
RAB3C                 0.260   RAB3C, member RAS oncogene family 
RAB3B                 0.251   RAB3B, member RAS oncogene family 
RAB35                 0.247   RAB35, member RAS oncogene family 
RAB3A                 0.244   RAB3A, member RAS oncogene family 
RAB3D                 0.238   RAB3D, member RAS oncogene family 
RAB30                 0.238   RAB30, member RAS oncogene family 
RAB13                 0.231   RAB13, member RAS oncogene family 
LOC100131294          0.229   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.229   PREDICTED: similar to hCG24991 
LOC100131294          0.229   PREDICTED: similar to hCG24991 
RAB7A                 0.224   RAB7, member RAS oncogene family 
RAB11B                0.220   RAB11B, member RAS oncogene family 
RAB36                 0.220   RAB36, member RAS oncogene family 
RAB12                 0.217   RAB12, member RAS oncogene family 
RAB7L1                0.217   RAB7, member RAS oncogene family-like 1 isoform 1 [...
RAB7L1                0.217   RAB7, member RAS oncogene family-like 1 isoform 1 [Ho...
RAB7B                 0.217   RAB7B, member RAS oncogene family 
RAB1B                 0.215   RAB1B, member RAS oncogene family 
RAB8B                 0.215   RAB8B, member RAS oncogene family 
RAB6B                 0.215   RAB6B, member RAS oncogene family 
RAB6A                 0.213   RAB6A, member RAS oncogene family isoform a 
RAB5A                 0.213   RAB5A, member RAS oncogene family 
RAB5B                 0.213   RAB5B, member RAS oncogene family 
RAB10                 0.213   ras-related GTP-binding protein RAB10 
RAB6A                 0.211   RAB6A, member RAS oncogene family isoform b 
RAB5C                 0.211   RAB5C, member RAS oncogene family isoform a 
RAB5C                 0.211   RAB5C, member RAS oncogene family isoform b 
RAB11A                0.211   Ras-related protein Rab-11A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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