Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4502739
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2
[Homo sapiens]
(367 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo... 753 0.0
gi|4502737 cyclin-dependent kinase 5, regulatory subunit 1 [Homo... 280 2e-75
gi|56549694 enabled homolog isoform a [Homo sapiens] 52 8e-07
gi|39930375 enabled homolog isoform b [Homo sapiens] 52 8e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 8e-07
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 51 2e-06
gi|157168329 formin 1 [Homo sapiens] 50 2e-06
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 50 3e-06
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 50 3e-06
gi|52485606 formin-like 2 [Homo sapiens] 50 4e-06
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 49 5e-06
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 49 7e-06
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 48 1e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 48 1e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 48 2e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 48 2e-05
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 48 2e-05
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 47 2e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 2e-05
gi|33356148 formin-like 1 [Homo sapiens] 47 2e-05
gi|11415052 retinoid X receptor, beta [Homo sapiens] 46 5e-05
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 46 5e-05
gi|148613878 acrosin precursor [Homo sapiens] 46 5e-05
gi|112421108 capicua homolog [Homo sapiens] 46 5e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 46 6e-05
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 46 6e-05
gi|117938310 sine oculis binding protein homolog [Homo sapiens] 46 6e-05
gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo s... 45 8e-05
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 45 8e-05
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens] 45 8e-05
>gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo
sapiens]
Length = 367
Score = 753 bits (1943), Expect = 0.0
Identities = 367/367 (100%), Positives = 367/367 (100%)
Query: 1 MGTVLSLSPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVL 60
MGTVLSLSPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVL
Sbjct: 1 MGTVLSLSPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVL 60
Query: 61 ISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKP 120
ISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKP
Sbjct: 61 ISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKP 120
Query: 121 LAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQ 180
LAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQ
Sbjct: 121 LAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQ 180
Query: 181 ASTGELLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRSLLLQGWQDQAFITPANLVFVY 240
ASTGELLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRSLLLQGWQDQAFITPANLVFVY
Sbjct: 181 ASTGELLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRSLLLQGWQDQAFITPANLVFVY 240
Query: 241 LLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISYPLKPFLVEPDKERFWQRCLRL 300
LLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISYPLKPFLVEPDKERFWQRCLRL
Sbjct: 241 LLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISYPLKPFLVEPDKERFWQRCLRL 300
Query: 301 IQRLSPQMLRLNADPHFFTQVFQDLKNEGEAAASGGGPPSGGAPAASSAARDSCAAGTKH 360
IQRLSPQMLRLNADPHFFTQVFQDLKNEGEAAASGGGPPSGGAPAASSAARDSCAAGTKH
Sbjct: 301 IQRLSPQMLRLNADPHFFTQVFQDLKNEGEAAASGGGPPSGGAPAASSAARDSCAAGTKH 360
Query: 361 WTMNLDR 367
WTMNLDR
Sbjct: 361 WTMNLDR 367
>gi|4502737 cyclin-dependent kinase 5, regulatory subunit 1 [Homo
sapiens]
Length = 307
Score = 280 bits (715), Expect = 2e-75
Identities = 170/328 (51%), Positives = 200/328 (60%), Gaps = 36/328 (10%)
Query: 1 MGTVLSLSPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVL 60
MGTVLSLSP+ R L E+ G +G Y A K K + LKR S+
Sbjct: 1 MGTVLSLSPSY-----RKATLFED-------GAATVGHYTAVQNSKNAK-DKNLKRHSI- 46
Query: 61 ISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKP 120
IS L WKR+VA SAKKK SKKV P + + N ENL +
Sbjct: 47 ISVLPWKRIVAVSAKKKN-SKKVQPNSSYQNN---ITHLNNENLKKSL-----SCANLST 97
Query: 121 LAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQ 180
A P P P A PP+ + +Q GS K P P G+P+RVIVQ
Sbjct: 98 FAQPPPAQPPA-----PPASQLSGSQTGGSSSVKKAPHPAVTS-------AGTPKRVIVQ 145
Query: 181 ASTGELLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRSLLLQGWQDQAFITPANLVFVY 240
AST ELLRCLG+F+CRRCYRLK LSP + V W R VDRSLLLQGWQDQ FITPAN+VF+Y
Sbjct: 146 ASTSELLRCLGEFLCRRCYRLKHLSPTDPVLWLRSVDRSLLLQGWQDQGFITPANVVFLY 205
Query: 241 LLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISYPLKPFLVEPDKERFWQRCLRL 300
+LCR+ + E+ S ELQA LTCLYL+YSYMGNEISYPLKPFLVE KE FW RCL +
Sbjct: 206 MLCRDVI-SSEVGSDHELQAVLLTCLYLSYSYMGNEISYPLKPFLVESCKEAFWDRCLSV 264
Query: 301 IQRLSPQMLRLNADPHFFTQVFQDLKNE 328
I +S +ML++NADPH+FTQVF DLKNE
Sbjct: 265 INLMSSKMLQINADPHYFTQVFSDLKNE 292
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 52.0 bits (123), Expect = 8e-07
Identities = 26/60 (43%), Positives = 28/60 (46%)
Query: 115 GGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP 174
G A P P+P PA A+ PP G P S G PPPPPPP P PP P P
Sbjct: 309 GPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPP 368
Score = 30.8 bits (68), Expect = 2.0
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 13/70 (18%)
Query: 118 AKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSG-------GGKPPPPPPPAP------Q 164
A P +V P + G AA+QP + G PPPPPP P
Sbjct: 268 AAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQAS 327
Query: 165 VAPPVPGGSP 174
VA P P G P
Sbjct: 328 VALPPPPGPP 337
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 52.0 bits (123), Expect = 8e-07
Identities = 26/60 (43%), Positives = 28/60 (46%)
Query: 115 GGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP 174
G A P P+P PA A+ PP G P S G PPPPPPP P PP P P
Sbjct: 309 GPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPP 368
Score = 30.8 bits (68), Expect = 2.0
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 13/70 (18%)
Query: 118 AKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSG-------GGKPPPPPPPAP------Q 164
A P +V P + G AA+QP + G PPPPPP P
Sbjct: 268 AAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQAS 327
Query: 165 VAPPVPGGSP 174
VA P P G P
Sbjct: 328 VALPPPPGPP 337
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 52.0 bits (123), Expect = 8e-07
Identities = 54/187 (28%), Positives = 64/187 (34%), Gaps = 25/187 (13%)
Query: 2 GTVLSLSPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKG-----GKGESRLKR 56
G+ S +P +A G P A PAG AL P G G G G +
Sbjct: 132 GSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAG 191
Query: 57 PSVL-----ISALTWKRLVAASAKK--KKGSKKVTPKPASTGPDPLVQQRNRENLLRKGR 109
P +AL AA A G + P P P ++Q G
Sbjct: 192 PGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFV-----GA 246
Query: 110 DPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPV 169
P P A P P PAAA PP+ + A P G P PP AP V PP
Sbjct: 247 AAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPP-----GHPAGPPTAAPAVPPPA 301
Query: 170 P---GGS 173
GGS
Sbjct: 302 AAQNGGS 308
Score = 37.7 bits (86), Expect = 0.016
Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 107 KGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGS----GGGKPPPPPPPA 162
K R PP+G + PVP A AA EP G A P + G P P P P
Sbjct: 125 KLRPPPEGSAGS---CAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPG 181
Query: 163 PQVAPPVPGG 172
P P P G
Sbjct: 182 PGPGPGKPAG 191
Score = 35.4 bits (80), Expect = 0.082
Identities = 33/120 (27%), Positives = 42/120 (35%), Gaps = 13/120 (10%)
Query: 70 VAASAKKKKGSKKVTPKPA-STGPDPLVQQRNRENLLRK----GRDPPDGGGTAKP---- 120
V A+A G+ V+ PA + G P + GR P GGG +P
Sbjct: 50 VRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPS 109
Query: 121 ---LAVPVPTVPAAAATCEPPSGGSAAAQP-PGSGGGKPPPPPPPAPQVAPPVPGGSPRR 176
VP P AA PP G + + P P + P P PA P P R
Sbjct: 110 PRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAAR 169
Score = 29.6 bits (65), Expect = 4.5
Identities = 41/178 (23%), Positives = 50/178 (28%), Gaps = 36/178 (20%)
Query: 9 PASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKR 68
PA +A P APP A PP G + P
Sbjct: 250 PAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPP--------- 300
Query: 69 LVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTV 128
AA+ P PA+ GP + Q P G A P
Sbjct: 301 --AAAQNGGSAGAAPAPAPAAGGPAGVSGQ------------PGPGAAAAAPAPGVKAES 346
Query: 129 PAAAATCEPPSGGSAAAQPPGSG-----------GGKPPPP--PPPAPQVAPPVPGGS 173
P PP+ + AA P S G P P PPPAP +P G+
Sbjct: 347 PKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGA 404
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 50.8 bits (120), Expect = 2e-06
Identities = 50/179 (27%), Positives = 61/179 (34%), Gaps = 17/179 (9%)
Query: 9 PASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKR 68
P K R P P + + PP G G PP G +P +
Sbjct: 102 PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 161
Query: 69 LVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTV 128
K + S+ KP P Q + K + PP GG KP P P
Sbjct: 162 PPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN-KPQGPPPPGK 220
Query: 129 PAAAATCEPPSG---GSAAAQPPG-------SGGGKP--PPPPPPAPQVAPPVPGGSPR 175
P PP G +A PPG GG +P PPPPP PQ PP G P+
Sbjct: 221 PQG----PPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 275
Score = 44.3 bits (103), Expect = 2e-04
Identities = 48/172 (27%), Positives = 61/172 (35%), Gaps = 33/172 (19%)
Query: 15 GRRPGGLPEEKKKA--PPAGDEALGGYGAPP---VGKGGKGESRLKRPSVLISALTWKRL 69
G +P G P K PP GD +PP G +G ++ + P
Sbjct: 209 GNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGK------ 262
Query: 70 VAASAKKKKGSKKVTPKPAST--GPDPLVQQRNRENLLRKGRD---PPDGGGTAKPLAVP 124
+ G+K P P GP P ++R + G+ PP GG +P P
Sbjct: 263 -PQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGN--QPQGPP 319
Query: 125 VPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRR 176
PP G PP GG KP PPPP PP GGS R
Sbjct: 320 ------------PPPGKPQG--PPPQGGNKPQGPPPPGKPQGPPPQGGSKSR 357
Score = 42.0 bits (97), Expect = 9e-04
Identities = 49/185 (26%), Positives = 61/185 (32%), Gaps = 38/185 (20%)
Query: 8 SPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVG----KGGKGESRLKRPSVLISA 63
SP +G P G + + PP G G PP G +G + + P
Sbjct: 237 SPPGKPQGPPPQGGNQPQGPPPPPGKPQ----GPPPQGGNKPQGPPPPGKPQGPP----- 287
Query: 64 LTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAV 123
K + S+ KP P Q + K + PP GG KP
Sbjct: 288 -------PQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN-KPQGP 339
Query: 124 PVPTVPAAAATCEPPSGGS---AAAQPPGSGGGKP----------PPPPPPAPQVAPPVP 170
P P P PP GGS +A PPG G P PPP PQ P
Sbjct: 340 PPPGKPQGP----PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP 395
Query: 171 GGSPR 175
G P+
Sbjct: 396 AGQPQ 400
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 18/111 (16%)
Query: 79 GSKKVTPKPAST--GPDPLVQQ-RNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATC 135
G+K P P GP P + R+ + K + PP GG P P P
Sbjct: 86 GNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP--- 142
Query: 136 EPPSGGSAAAQPPGSGGGKPPPP-----------PPPAPQVAPPVPGGSPR 175
PP GG+ PP G + PPP PP PQ PP G P+
Sbjct: 143 -PPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQ 192
Score = 39.3 bits (90), Expect = 0.006
Identities = 26/75 (34%), Positives = 27/75 (36%), Gaps = 15/75 (20%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPG----------SGGGKPPPPPP 160
PP GG KP P P PP GG+ PP GG KP PPP
Sbjct: 40 PPQGGN--KPQG---PPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP 94
Query: 161 PAPQVAPPVPGGSPR 175
P PP G R
Sbjct: 95 PGKPQGPPPQGDKSR 109
Score = 38.5 bits (88), Expect = 0.010
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 126 PTVPAAAATCEPPSGGSAAAQPPG----------SGGGKP--PPPPPPAPQVAPPVPGGS 173
P++ A PP GG+ PP GG +P PPPPP PQ PP G
Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 88
Query: 174 PR 175
P+
Sbjct: 89 PQ 90
Score = 37.0 bits (84), Expect = 0.028
Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 13/125 (10%)
Query: 58 SVLISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGT 117
SV + AL+ + + +++ + P P + + + K + PP GG
Sbjct: 7 SVALLALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGN 66
Query: 118 AKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPP---------PPAPQVAPP 168
P P P PP GG+ PP G + PPP PP PP
Sbjct: 67 QPQGPPPPPGKPQGP----PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP 122
Query: 169 VPGGS 173
GG+
Sbjct: 123 PQGGN 127
Score = 35.0 bits (79), Expect = 0.11
Identities = 43/175 (24%), Positives = 58/175 (33%), Gaps = 23/175 (13%)
Query: 15 GRRPGGLPEEKKKA--PPAGDEALGGYGAP--PVGKGGKGESRLKRPSVLISALTWKRLV 70
G +P G P K PP GD++ P P G +G ++ + P
Sbjct: 86 GNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK------- 138
Query: 71 AASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPA 130
+ G+K P P P Q N+ R R PP P P P
Sbjct: 139 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKS---RSSRSPPGKPQGPPPQGGNQPQGP- 194
Query: 131 AAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQASTGE 185
PP G PP GG P PPP + P P G + ++ G+
Sbjct: 195 ------PPPPGKPQGPPPQ--GGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGK 241
Score = 33.5 bits (75), Expect = 0.31
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 136 EPPS--GGSAAAQPPGSGGGKP--PPPPPPAPQVAPPVPGGSPR 175
E PS G+ PP GG KP PP PP PQ PP G P+
Sbjct: 27 ESPSLIAGNPQGAPP-QGGNKPQGPPSPPGKPQGPPPQGGNQPQ 69
Score = 31.6 bits (70), Expect = 1.2
Identities = 50/184 (27%), Positives = 58/184 (31%), Gaps = 42/184 (22%)
Query: 15 GRRPGGLPEEKKKAPPAGDEALGG---YGAPPVGK--------GGKGESRLKRPSVLISA 63
G +P G P K P G GG G PP GK G K S P
Sbjct: 250 GNQPQGPPPPPGK--PQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGK---- 303
Query: 64 LTWKRLVAASAKKKKGSKKVTPKPASTGPD-PLVQQRNREN---LLRKGRDPPDGGGTAK 119
+ G++ P P P P Q N+ K + PP GG+
Sbjct: 304 -------PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 356
Query: 120 PLAVPVPTVPAAAATCE-------PPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGG 172
A P P E PP G QP G+P PP P PQ GG
Sbjct: 357 RSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP-PQ------GG 409
Query: 173 SPRR 176
P R
Sbjct: 410 RPSR 413
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 50.4 bits (119), Expect = 2e-06
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 16/94 (17%)
Query: 81 KKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSG 140
K + P PAS P P + P G G+ P A P+P V A PP
Sbjct: 643 KALPPPPASIPPPPPL---------------PSGLGSLSP-APPMPPVSAGPPLPPPPPP 686
Query: 141 GSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP 174
P +G PPPPPP APP PGG P
Sbjct: 687 PPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPP 720
Score = 35.8 bits (81), Expect = 0.062
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 73 SAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAA 132
S K S ++ PK + + N + P +G + + A+P P PA+
Sbjct: 595 SESKTTRSNQLVPKKLNISSLSQLSPPNDHKDIHAALQPMEGMASNQQKALPPP--PASI 652
Query: 133 ATCEP-PSG-GSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
P PSG GS + PP PP PPP P PP+P
Sbjct: 653 PPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPP-PPPLP 691
Score = 28.5 bits (62), Expect = 10.0
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 8/54 (14%)
Query: 128 VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPP-------PAPQVAPPVPGGSP 174
+ AA E + A PP PPPP P PAP + PPV G P
Sbjct: 627 IHAALQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPM-PPVSAGPP 679
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 50.1 bits (118), Expect = 3e-06
Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 20/120 (16%)
Query: 79 GSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPD--GGGTAKPLAVPVPTVPAAAATCE 136
GS P P P P V + L PP G G P A P+P P +CE
Sbjct: 432 GSSAEPPPPPPPPPLPSVGAK----ALPTAPPPPPLPGLGAMAPPAPPLP--PPLPGSCE 485
Query: 137 ------PPSGGSAAAQPP-----GSGGGKPPPPPPPAP-QVAPPVPGGSPRRVIVQASTG 184
PP G PP G G G PPPPPP P +PPV GG ++ Q G
Sbjct: 486 FLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLLPCTCSPPVAGGMEEVIVAQVDHG 545
Score = 41.2 bits (95), Expect = 0.001
Identities = 39/134 (29%), Positives = 52/134 (38%), Gaps = 35/134 (26%)
Query: 56 RPSVLISALTWKRLVAASAKKKKGSKK---VTPKPASTGPDPLVQQRNRENLLRKGRDPP 112
RPS L+ A K + A + ++GS TPKP+ G P +P
Sbjct: 349 RPSPLVKA--HKSVQANLDQSQRGSSPQNTTTPKPSVEGQQPAAAA---------ACEPV 397
Query: 113 DGGGTAKPLAVPVPTVPAAAATCEPPSGG-----SAAAQPPGSGGGKPPPPPPPAPQVA- 166
D + L V P A+ PP ++A+PP PPPPPPP P V
Sbjct: 398 DHAQSESILKVSQPRALEQQASTPPPPPPPPLLPGSSAEPP------PPPPPPPLPSVGA 451
Query: 167 ---------PPVPG 171
PP+PG
Sbjct: 452 KALPTAPPPPPLPG 465
Score = 38.1 bits (87), Expect = 0.013
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 18/98 (18%)
Query: 92 PDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTV----PAAAATCEPPSGGSA---- 143
P PLV+ ++ D G + + P P+V PAAAA CEP +
Sbjct: 350 PSPLVKAHKS---VQANLDQSQRGSSPQNTTTPKPSVEGQQPAAAAACEPVDHAQSESIL 406
Query: 144 -AAQPPG---SGGGKPPPPPP---PAPQVAPPVPGGSP 174
+QP PPPPPP P PP P P
Sbjct: 407 KVSQPRALEQQASTPPPPPPPPLLPGSSAEPPPPPPPP 444
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 50.1 bits (118), Expect = 3e-06
Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 20/120 (16%)
Query: 79 GSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPD--GGGTAKPLAVPVPTVPAAAATCE 136
GS P P P P V + L PP G G P A P+P P +CE
Sbjct: 432 GSSAEPPPPPPPPPLPSVGAK----ALPTAPPPPPLPGLGAMAPPAPPLP--PPLPGSCE 485
Query: 137 ------PPSGGSAAAQPP-----GSGGGKPPPPPPPAP-QVAPPVPGGSPRRVIVQASTG 184
PP G PP G G G PPPPPP P +PPV GG ++ Q G
Sbjct: 486 FLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLLPCTCSPPVAGGMEEVIVAQVDHG 545
Score = 41.2 bits (95), Expect = 0.001
Identities = 39/134 (29%), Positives = 52/134 (38%), Gaps = 35/134 (26%)
Query: 56 RPSVLISALTWKRLVAASAKKKKGSKK---VTPKPASTGPDPLVQQRNRENLLRKGRDPP 112
RPS L+ A K + A + ++GS TPKP+ G P +P
Sbjct: 349 RPSPLVKA--HKSVQANLDQSQRGSSPQNTTTPKPSVEGQQPAAAA---------ACEPV 397
Query: 113 DGGGTAKPLAVPVPTVPAAAATCEPPSGG-----SAAAQPPGSGGGKPPPPPPPAPQVA- 166
D + L V P A+ PP ++A+PP PPPPPPP P V
Sbjct: 398 DHAQSESILKVSQPRALEQQASTPPPPPPPPLLPGSSAEPP------PPPPPPPLPSVGA 451
Query: 167 ---------PPVPG 171
PP+PG
Sbjct: 452 KALPTAPPPPPLPG 465
Score = 38.1 bits (87), Expect = 0.013
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 18/98 (18%)
Query: 92 PDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTV----PAAAATCEPPSGGSA---- 143
P PLV+ ++ D G + + P P+V PAAAA CEP +
Sbjct: 350 PSPLVKAHKS---VQANLDQSQRGSSPQNTTTPKPSVEGQQPAAAAACEPVDHAQSESIL 406
Query: 144 -AAQPPG---SGGGKPPPPPP---PAPQVAPPVPGGSP 174
+QP PPPPPP P PP P P
Sbjct: 407 KVSQPRALEQQASTPPPPPPPPLLPGSSAEPPPPPPPP 444
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 49.7 bits (117), Expect = 4e-06
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
P G ++ PL P P +P ++ T E G P PPPPPPP P PP+P
Sbjct: 516 PTMGAASSGPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLP 575
Query: 171 GGSPRRV 177
G + V
Sbjct: 576 GPAAETV 582
Score = 35.4 bits (80), Expect = 0.082
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 23/64 (35%)
Query: 120 PLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPP---------PAPQVAPPVP 170
P+ P+P P PP PP PPPPPP PAP +APP+P
Sbjct: 547 PVTPPMPPPPPPPPPPPPP--------PP------PPPPPPLPGPAAETVPAPPLAPPLP 592
Query: 171 GGSP 174
P
Sbjct: 593 SAPP 596
Score = 29.6 bits (65), Expect = 4.5
Identities = 31/129 (24%), Positives = 40/129 (31%), Gaps = 4/129 (3%)
Query: 40 GAPPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQR 99
G + K G G+ + P V L+ V A + P P PL
Sbjct: 479 GTIKIQKKGDGDIAIL-PVVASGTLSMGSEVVAGNSVGPTMGAASSGPLPPPPPPLPPSS 537
Query: 100 NRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPP 159
+ ++ G P P P P P PP G AA P P P
Sbjct: 538 DTPETVQNGPVTPP---MPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSA 594
Query: 160 PPAPQVAPP 168
PP P + P
Sbjct: 595 PPLPGTSSP 603
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 49.3 bits (116), Expect = 5e-06
Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 47/197 (23%)
Query: 5 LSLSPASSAKGRRPGGLPEEKKKAP-PAGDEALGGYGAPPVGKGGKGESRLKRPSVLISA 63
L+L P S +G R GG P AP P+ + GG G G + + P SA
Sbjct: 1039 LALGPQPSLRGWRGGG-PSPTPGAPSPSHHGSAGGGGGSSQGPALR---YFQLPPRAASA 1094
Query: 64 LTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKG--------------- 108
+ + A S + +KG PLV+Q E +KG
Sbjct: 1095 AMY--VPARSGRGRKG--------------PLVKQTKVEGEPQKGGGLPPAPSPTSPASP 1138
Query: 109 RDPPDGGGTAKPLAVPVPTV----PAAAATCEPPSGGSAAAQPP-------GSGGGKPPP 157
+ PP ++ ++P+PT+ P+ +++ G S A+PP G GGG P
Sbjct: 1139 QPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGGGGSSP 1198
Query: 158 PPPPAPQVAPPVPGGSP 174
P PA PP P P
Sbjct: 1199 SPAPAMSPVPPSPSPVP 1215
Score = 35.8 bits (81), Expect = 0.062
Identities = 42/139 (30%), Positives = 50/139 (35%), Gaps = 20/139 (14%)
Query: 34 EALGGYGAPPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKKKGSKKVTPKPAS-TGP 92
+A GG P G +L PS L R + AS + G P + T P
Sbjct: 1735 QAFGGSSTP----GPPYPPQLMTPSKLRG-----RALGASGGLRPGPSGGLRDPVTPTSP 1785
Query: 93 DPLVQQRNRENLL--RKGRDPPDGGGTAKPLAVP--VPTVPAAAATCEPPSGGSAAAQPP 148
V + LL R PP G P+AV VP VP A+ P P
Sbjct: 1786 TVSVTGAGTDGLLALRACSGPPTAGVAGGPVAVEPEVPPVPLPTASSLPRK------LLP 1839
Query: 149 GSGGGKPPPPPPPAPQVAP 167
G PPPPP P P P
Sbjct: 1840 WEEGPGPPPPPLPGPLAQP 1858
Score = 34.3 bits (77), Expect = 0.18
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 16/69 (23%)
Query: 122 AVPVPTVPAAAATCEPPSGGSAAAQ---------------PPGSGGGKPP-PPPPPAPQV 165
A P+P VP A PP+ S A+ G PP PP P AP
Sbjct: 1599 ATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPAAPAP 1658
Query: 166 APPVPGGSP 174
A P PG P
Sbjct: 1659 AAPQPGPDP 1667
Score = 33.9 bits (76), Expect = 0.24
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 19/97 (19%)
Query: 87 PASTGPDPLVQQRNRENLLRKGRDPP-DGGGTAKPLAVPVPTVPAAAA-------TCEPP 138
P + G PL LL+ G +PP G +KP P P C+P
Sbjct: 1450 PTAPGVGPL--------LLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPR 1501
Query: 139 SGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPR 175
+ ++ PP G P PPP+P+ + P SPR
Sbjct: 1502 APVTSGRGPPSEDG---PGVPPPSPRRSVPPSPTSPR 1535
Score = 32.3 bits (72), Expect = 0.69
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 108 GRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSG-GGKPPPPPPPAPQVA 166
G P GG P+ PTV A + A + PP +G G P P P V
Sbjct: 1767 GLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALRACSGPPTAGVAGGPVAVEPEVPPVP 1826
Query: 167 PPVPGGSPRRVI 178
P PR+++
Sbjct: 1827 LPTASSLPRKLL 1838
Score = 30.4 bits (67), Expect = 2.6
Identities = 47/176 (26%), Positives = 61/176 (34%), Gaps = 45/176 (25%)
Query: 16 RRPGGLPEEKKK------APPAGDEALGGYGAPPVGKGGKGESRLKRPSVL----ISALT 65
RR GG E ++ + AGDE G G +G G RL+ + SA
Sbjct: 1241 RREGGWQNEARRRSTLFLSTDAGDEDGGDGG---LGTGAAPGPRLRHSKSIDEGMFSAEP 1297
Query: 66 WKRLVAASAKKKKGSKKVTPKPASTG-----------PDPLVQQRNRENLLRKGRDPPDG 114
+ RL +A + G + G P PLV L K DP
Sbjct: 1298 YLRLESAGSGAGYGGYGAGSRAYGGGGGSSAFTSFLPPRPLVHP-----LTGKALDP--- 1349
Query: 115 GGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
A PL + + A + S G A QPP P PP P + PP P
Sbjct: 1350 ---ASPLGL---ALAARERALKESSEGGGAPQPP-------PRPPSPRYEAPPPTP 1392
Score = 29.6 bits (65), Expect = 4.5
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 142 SAAAQPPGSGGGKPPPP--PPPAPQVAPPVPGGSPR 175
S + PGS PPP PP P PPVP S R
Sbjct: 909 SRSLSVPGSEDIPPPPTTSPPEPPYSTPPVPSSSGR 944
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 48.9 bits (115), Expect = 7e-06
Identities = 35/98 (35%), Positives = 38/98 (38%), Gaps = 11/98 (11%)
Query: 85 PKPASTG----PDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPP-- 138
P P S G P P + N+ R G PP G A P P P PP
Sbjct: 316 PPPPSRGGNQLPRPPIVGGNKG---RSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPP 372
Query: 139 --SGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP 174
+G S PP G G PP PPPP P PP G P
Sbjct: 373 PATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGP 410
Score = 42.4 bits (98), Expect = 7e-04
Identities = 40/150 (26%), Positives = 52/150 (34%), Gaps = 29/150 (19%)
Query: 42 PPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNR 101
PP +G ++L RP ++ K S + P P P P
Sbjct: 314 PPPPPPSRGGNQLPRPPIV-------------GGNKGRSGPLPPVPLGIAPPPPTP---- 356
Query: 102 ENLLRKGRDPPDGGGTAKP------LAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKP 155
+G PP GG P + P+P P A P PP SG G
Sbjct: 357 -----RGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPA 411
Query: 156 PPPPPPAPQVAPPV-PGGSPRRVIVQASTG 184
PPP PPA A + PGG ++ Q G
Sbjct: 412 PPPLPPALVPAGGLAPGGGRGALLDQIRQG 441
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 48.1 bits (113), Expect = 1e-05
Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 111 PPDGGGTAKPL-------AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAP 163
PP G A P+ A PVP + A PP+G S A P +G PPP PP
Sbjct: 630 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGD 689
Query: 164 QVAPPVP 170
APPVP
Sbjct: 690 SGAPPVP 696
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 111 PPDGGGTAKPL-------AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAP 163
PP G A P+ A PVP + A PP+G S A P +G PP PP
Sbjct: 586 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 645
Query: 164 QVAPPVP 170
APPVP
Sbjct: 646 SGAPPVP 652
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 111 PPDGGGTAKPL-------AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAP 163
PP G A P+ A PVP + A PP+G S A P +G PP PP
Sbjct: 597 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 656
Query: 164 QVAPPVP 170
APPVP
Sbjct: 657 SGAPPVP 663
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 111 PPDGGGTAKPL-------AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAP 163
PP G A P+ A PVP + A PP+G S A P +G PP PP
Sbjct: 608 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 667
Query: 164 QVAPPVP 170
APPVP
Sbjct: 668 SGAPPVP 674
Score = 44.3 bits (103), Expect = 2e-04
Identities = 22/49 (44%), Positives = 25/49 (51%)
Query: 122 AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
A PVP + AT PP+G S A P +G PP PP APPVP
Sbjct: 560 ATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVP 608
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 111 PPDGGGTAKPL-------AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAP 163
PP G P+ A PVP + A PP+G S A P +G PP PP
Sbjct: 575 PPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 634
Query: 164 QVAPPVP 170
APPVP
Sbjct: 635 SGAPPVP 641
Score = 41.6 bits (96), Expect = 0.001
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
PP G A PVP + PP+G S A P +G PP PP APPVP
Sbjct: 564 PPTGDSEA----TPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVP 619
Score = 40.4 bits (93), Expect = 0.003
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 125 VPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
+PTV AT PP+G S A P +G + P PP APPVP
Sbjct: 552 LPTVTDQEATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVP 597
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 111 PPDGGGTAKPL-------AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAP 163
PP G A P+ A PVP + A PP+G + P +G PP PP
Sbjct: 641 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGD 700
Query: 164 QVAPPV 169
APPV
Sbjct: 701 SGAPPV 706
Score = 38.1 bits (87), Expect = 0.013
Identities = 28/78 (35%), Positives = 30/78 (38%), Gaps = 18/78 (23%)
Query: 111 PPDGGGTAKPL-------AVPVPTVPAAAATCEPPSGGSAAAQ-PPGSGGGKPP------ 156
PP G A P+ A PVP A PP+G S A PP G PP
Sbjct: 652 PPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGD 711
Query: 157 ----PPPPPAPQVAPPVP 170
P PP APPVP
Sbjct: 712 SETAPVPPTGDSGAPPVP 729
Score = 37.7 bits (86), Expect = 0.016
Identities = 22/60 (36%), Positives = 25/60 (41%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
PP T A PVP + A P+G S A P +G PP PP A PVP
Sbjct: 681 PPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEAAPVP 740
Score = 35.8 bits (81), Expect = 0.062
Identities = 38/150 (25%), Positives = 45/150 (30%), Gaps = 46/150 (30%)
Query: 29 PPAGDEAL------GGYGAPPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKKKGSKK 82
PP GD G GAPPV G + P+ G
Sbjct: 630 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT--------------------GDSG 669
Query: 83 VTPKPAS--TGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSG 140
P P + GP P+ PP G A P+ PT + A P
Sbjct: 670 APPVPPTGDAGPPPV---------------PPTGDSGAPPVP---PTGDSGAPPVTPTGD 711
Query: 141 GSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
A PP G PP PP + AP P
Sbjct: 712 SETAPVPPTGDSGAPPVPPTGDSEAAPVPP 741
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 48.1 bits (113), Expect = 1e-05
Identities = 34/110 (30%), Positives = 41/110 (37%), Gaps = 29/110 (26%)
Query: 85 PKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSG---- 140
P P ++GP P +GR P + P A P P P+ + PP
Sbjct: 292 PPPHNSGPPPPPA---------RGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRM 342
Query: 141 ---------GSAAAQPP-------GSGGGKPPPPPPPAPQVAPPVPGGSP 174
SA + PP G G PPPPPPP P PP P G P
Sbjct: 343 YPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLP 392
Score = 44.3 bits (103), Expect = 2e-04
Identities = 28/78 (35%), Positives = 30/78 (38%), Gaps = 12/78 (15%)
Query: 102 ENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPP 161
+N LR+ PP P P PP S PP G G PPPPP
Sbjct: 269 KNELRRQAPPPPPPSRGGPPPPP------------PPPHNSGPPPPPARGRGAPPPPPSR 316
Query: 162 APQVAPPVPGGSPRRVIV 179
AP APP P S V V
Sbjct: 317 APTAAPPPPPPSRPSVAV 334
Score = 43.1 bits (100), Expect = 4e-04
Identities = 30/94 (31%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 85 PKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAA 144
P P+ GP P + G PP G P P P+ AA PP +
Sbjct: 280 PPPSRGGPPPPPPPPHNS-----GPPPPPARGRGAP--PPPPSRAPTAAPPPPPPSRPSV 332
Query: 145 AQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVI 178
A PP PPPPP P AP P P V+
Sbjct: 333 AVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVL 366
Score = 41.6 bits (96), Expect = 0.001
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 124 PVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRV 177
P P +P++A + PP S P + PPPPPPP P P +P +V
Sbjct: 346 PPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQV 399
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 47.8 bits (112), Expect = 2e-05
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 120 PLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGG 172
P PVP P P G+ PP G PPPPPP P PP+PGG
Sbjct: 568 PSRAPVPPAPPL-----PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGG 615
Score = 44.7 bits (104), Expect = 1e-04
Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 112 PDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPP-----GSGGGKPPPPPPPA---- 162
P+G G P ++P T A PP GSA PP GS G PPPPP P
Sbjct: 649 PEGVGIPSPSSLPGGT----AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGM 704
Query: 163 PQVAPPVPGG 172
P PP+PGG
Sbjct: 705 PPPPPPLPGG 714
Score = 42.0 bits (97), Expect = 9e-04
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVA---- 166
PP G P P+P + P G + PP G + PPPPPP P A
Sbjct: 634 PPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPP 693
Query: 167 --PPVPG 171
PP+PG
Sbjct: 694 PPPPLPG 700
Score = 42.0 bits (97), Expect = 9e-04
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPP-----SGGSAAAQPPGSGG-GKPPPPP-PPAP 163
PP G+A+ + P P +P +A PP G PP GG G PPPPP P P
Sbjct: 669 PPPLPGSAR-IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP 727
Query: 164 QVAPPVPG 171
+ PP PG
Sbjct: 728 GIPPPPPG 735
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPS---GGSAAAQPPGSGGGKPPPPPPPAPQVAP 167
PP G P P P +P A PP GG PP GG PPPPP + P
Sbjct: 683 PPLPGSAGIP--PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 740
Query: 168 PVPGG 172
P P G
Sbjct: 741 PPPFG 745
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 120 PLAVPVPTVPAAAATCEPPS--GGSAAAQPPG-SGGGKPPPPPPPAPQVAPPVPGGSP 174
P P P +P PPS GG+A + PP SG PPPPP V P P P
Sbjct: 604 PPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLP 661
Score = 34.7 bits (78), Expect = 0.14
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVA---- 166
PP G + P P P P P GG + PP GG PPPP A
Sbjct: 590 PPAPGDSTTPPPPPPPPPPPP-----PLPGGVCISSPPSLPGGTAISPPPPLSGDATIPP 644
Query: 167 -PPVPGG 172
PP+P G
Sbjct: 645 PPPLPEG 651
Score = 34.7 bits (78), Expect = 0.14
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPS-GGSAAAQPP-----GSG--------GGKPP 156
PP GG ++ P P++P A PP G A PP G G GG
Sbjct: 610 PPLPGGVC--ISSP-PSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAI 666
Query: 157 PPPPPAPQVA------PPVPGGS 173
PPPPP P A PP+PG +
Sbjct: 667 PPPPPLPGSARIPPPPPPLPGSA 689
Score = 33.9 bits (76), Expect = 0.24
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 19/56 (33%)
Query: 123 VPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAP-----QVAPPVPGGS 173
+P P P + T PP PP PPPPPPP P P +PGG+
Sbjct: 587 IPPPPAPGDSTTPPPP--------PP------PPPPPPPLPGGVCISSPPSLPGGT 628
Score = 32.0 bits (71), Expect = 0.90
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPS--GGSAAAQPPGSGGGKPPPPPPPAPQVAPP 168
PP G P P P +P PP GG PP G PPPP AP
Sbjct: 696 PPLPGEAGMP--PPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPV 753
Query: 169 VPGG-SPRRV 177
+P G +P+++
Sbjct: 754 LPFGLTPKKL 763
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 47.8 bits (112), Expect = 2e-05
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 120 PLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGG 172
P PVP P P G+ PP G PPPPPP P PP+PGG
Sbjct: 577 PSRAPVPPAPPL-----PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGG 624
Score = 44.7 bits (104), Expect = 1e-04
Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 112 PDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPP-----GSGGGKPPPPPPPA---- 162
P+G G P ++P T A PP GSA PP GS G PPPPP P
Sbjct: 658 PEGVGIPSPSSLPGGT----AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGM 713
Query: 163 PQVAPPVPGG 172
P PP+PGG
Sbjct: 714 PPPPPPLPGG 723
Score = 42.0 bits (97), Expect = 9e-04
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVA---- 166
PP G P P+P + P G + PP G + PPPPPP P A
Sbjct: 643 PPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPP 702
Query: 167 --PPVPG 171
PP+PG
Sbjct: 703 PPPPLPG 709
Score = 42.0 bits (97), Expect = 9e-04
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPP-----SGGSAAAQPPGSGG-GKPPPPP-PPAP 163
PP G+A+ + P P +P +A PP G PP GG G PPPPP P P
Sbjct: 678 PPPLPGSAR-IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGP 736
Query: 164 QVAPPVPG 171
+ PP PG
Sbjct: 737 GIPPPPPG 744
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPS---GGSAAAQPPGSGGGKPPPPPPPAPQVAP 167
PP G P P P +P A PP GG PP GG PPPPP + P
Sbjct: 692 PPLPGSAGIP--PPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPP 749
Query: 168 PVPGG 172
P P G
Sbjct: 750 PPPFG 754
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 120 PLAVPVPTVPAAAATCEPPS--GGSAAAQPPG-SGGGKPPPPPPPAPQVAPPVPGGSP 174
P P P +P PPS GG+A + PP SG PPPPP V P P P
Sbjct: 613 PPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLP 670
Score = 34.7 bits (78), Expect = 0.14
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVA---- 166
PP G + P P P P P GG + PP GG PPPP A
Sbjct: 599 PPAPGDSTTPPPPPPPPPPPP-----PLPGGVCISSPPSLPGGTAISPPPPLSGDATIPP 653
Query: 167 -PPVPGG 172
PP+P G
Sbjct: 654 PPPLPEG 660
Score = 34.7 bits (78), Expect = 0.14
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPS-GGSAAAQPP-----GSG--------GGKPP 156
PP GG ++ P P++P A PP G A PP G G GG
Sbjct: 619 PPLPGGVC--ISSP-PSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAI 675
Query: 157 PPPPPAPQVA------PPVPGGS 173
PPPPP P A PP+PG +
Sbjct: 676 PPPPPLPGSARIPPPPPPLPGSA 698
Score = 33.9 bits (76), Expect = 0.24
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 19/56 (33%)
Query: 123 VPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAP-----QVAPPVPGGS 173
+P P P + T PP PP PPPPPPP P P +PGG+
Sbjct: 596 IPPPPAPGDSTTPPPP--------PP------PPPPPPPLPGGVCISSPPSLPGGT 637
Score = 32.0 bits (71), Expect = 0.90
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPS--GGSAAAQPPGSGGGKPPPPPPPAPQVAPP 168
PP G P P P +P PP GG PP G PPPP AP
Sbjct: 705 PPLPGEAGMP--PPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPV 762
Query: 169 VPGG-SPRRV 177
+P G +P+++
Sbjct: 763 LPFGLTPKKL 772
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 47.8 bits (112), Expect = 2e-05
Identities = 49/181 (27%), Positives = 63/181 (34%), Gaps = 23/181 (12%)
Query: 9 PASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPP---VGKGGKGESRLKRPSVLISALT 65
P K R P P + + PP G G PP G +G +R + P
Sbjct: 81 PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKP-- 138
Query: 66 WKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPV 125
+ K + + KP P Q + K + PP GG KP P
Sbjct: 139 --QGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGK-KPQGPPP 195
Query: 126 PTVPAAAATCEPPSGGSAAAQ---------PPGSGGGKP--PPPPPPAPQVAPPVPGGSP 174
P P PP G + + PP GG +P PPPPP PQ PP G P
Sbjct: 196 PGKPQGP----PPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 251
Query: 175 R 175
+
Sbjct: 252 Q 252
Score = 45.1 bits (105), Expect = 1e-04
Identities = 46/166 (27%), Positives = 58/166 (34%), Gaps = 29/166 (17%)
Query: 15 GRRPGGLPEEKKKA--PPAGDEALGGYGAP--PVGKGGKGESRLKRPSVLISALTWKRLV 70
G RP G P K PP GD++ P P G +G ++ + P
Sbjct: 126 GNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK------- 178
Query: 71 AASAKKKKGSKKVTPKPAST--GPDPLVQQ-RNRENLLRKGRDPPDGGGTAKPLAVPVPT 127
+ G K P P GP P + R+ ++ K + PP GG P P
Sbjct: 179 PQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPG 238
Query: 128 VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGS 173
P PP GG KP PPPP PP GGS
Sbjct: 239 KPQG---------------PPPQGGNKPQGPPPPGKPQGPPAQGGS 269
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/187 (27%), Positives = 60/187 (32%), Gaps = 33/187 (17%)
Query: 9 PASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGK-------GGKGESRLKRPSVLI 61
P K R P P + + PP G G PP GK GGK P
Sbjct: 142 PPQGDKSRSPRSPPGKPQGPPPQGGNQPQG-PPPPPGKPQGPPPQGGKKPQGPPPPGK-- 198
Query: 62 SALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPL 121
+ K + S+ KP P Q + K + PP GG KP
Sbjct: 199 -----PQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN-KPQ 252
Query: 122 AVPVPTVPAAAATCEPPSGGS---AAAQPPGSGGGKP----------PPPPPPAPQVAPP 168
P P P P GGS +A PPG G P PPP PQ
Sbjct: 253 GPPPPGKPQGP----PAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 308
Query: 169 VPGGSPR 175
P G P+
Sbjct: 309 PPAGQPQ 315
Score = 38.5 bits (88), Expect = 0.010
Identities = 50/185 (27%), Positives = 58/185 (31%), Gaps = 42/185 (22%)
Query: 15 GRRPGGLPEEKKKAPPAGDEALGG---YGAPPVGK-------GGKGESRLKRPSVLISAL 64
G +P G P K P G GG G PP GK G K S P
Sbjct: 44 GNKPQGPPPPPGK--PQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGK----- 96
Query: 65 TWKRLVAASAKKKKGSKKVTPKPASTGPD-PLVQQRNREN---LLRKGRDPPDGGGTAKP 120
+ G++ P P P P Q NR K + PP G ++
Sbjct: 97 ------PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRS 150
Query: 121 LAVPVPTVPAAAATCEPPSGGSAAAQPPG----------SGGGKPPPPPPPAPQVAPPVP 170
P P PP GG+ PP GG KP PPPP PP
Sbjct: 151 -----PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQ 205
Query: 171 GGSPR 175
G R
Sbjct: 206 GDKSR 210
Score = 36.6 bits (83), Expect = 0.037
Identities = 25/80 (31%), Positives = 27/80 (33%), Gaps = 14/80 (17%)
Query: 96 VQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKP 155
V Q +L+ P G KP P PP G PP GG KP
Sbjct: 23 VSQEESPSLIAGNPQGPSPQGGNKPQGPP------------PPPGKPQG--PPPQGGNKP 68
Query: 156 PPPPPPAPQVAPPVPGGSPR 175
PPPP PP G R
Sbjct: 69 QGPPPPGKPQGPPPQGDKSR 88
Score = 31.6 bits (70), Expect = 1.2
Identities = 44/170 (25%), Positives = 60/170 (35%), Gaps = 36/170 (21%)
Query: 15 GRRPGGLPEEKKKA--PPAGDEALGGYGAP--PVGKGGKGESRLKRPSVLISALTWKRLV 70
G++P G P K PP GD++ P P G +G ++ + P
Sbjct: 187 GKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGK------- 239
Query: 71 AASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLR----KGRDPPDGGGTAKPLAVPVP 126
+ G+K P P P Q ++ R K + PP G P P
Sbjct: 240 PQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGN-NPQGPP-- 296
Query: 127 TVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRR 176
PP+GG+ QP G+P PP P PQ GG P R
Sbjct: 297 ----------PPAGGNPQ-QPQAPPAGQPQGPPRP-PQ------GGRPSR 328
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 47.4 bits (111), Expect = 2e-05
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 20/127 (15%)
Query: 48 GKGESRLKRPSVLISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRK 107
G G +R KRP + + + +A+ K GS + ++T P P
Sbjct: 197 GVGCARAKRPGIYTATWPYLNWIAS----KIGSNALRMIQSATPPPPTT----------- 241
Query: 108 GRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAP 167
R PP + PL+ +P PP +A +PP S PPPPPPP P P
Sbjct: 242 -RPPPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPS----PPPPPPPPPSPLP 296
Query: 168 PVPGGSP 174
P P P
Sbjct: 297 PPPPPPP 303
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.4 bits (111), Expect = 2e-05
Identities = 48/160 (30%), Positives = 55/160 (34%), Gaps = 23/160 (14%)
Query: 19 GGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKKK 78
GGL K P A PP KGG L PS + T AA+ K
Sbjct: 1207 GGLATPSPKGAPTTPAA-----TPPSPKGG-----LATPSPKGAPTT----PAATPPSPK 1252
Query: 79 GSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPP 138
G TP P P + L+ G P G P V P+ AT P
Sbjct: 1253 GGP-ATPPPKGAPTPPAATPPS----LKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 139 SGGSAAAQPPGSGGGKPPPPPPPA----PQVAPPVPGGSP 174
+ A P S G P PPP P V PP P G+P
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTP 1347
Score = 46.2 bits (108), Expect = 5e-05
Identities = 48/169 (28%), Positives = 54/169 (31%), Gaps = 39/169 (23%)
Query: 8 SPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWK 67
SP P G P PP+ G A P KG + PS
Sbjct: 972 SPKGGPATPSPKGAPTPPAATPPSPK----GGPATPSPKGAPTPPAVTPPS--------- 1018
Query: 68 RLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPT 127
KGS TP P P + P G A PL PT
Sbjct: 1019 ---------PKGSPAATPFPKGASTPPAATPPS-----------PKGSPAATPLPKGAPT 1058
Query: 128 VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAP--PVPGGSP 174
PAA T P GG A P G PP PP+P+ P P P G+P
Sbjct: 1059 TPAA--TLPSPKGGPAT--PSLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Score = 45.1 bits (105), Expect = 1e-04
Identities = 54/170 (31%), Positives = 56/170 (32%), Gaps = 43/170 (25%)
Query: 19 GGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKKK 78
GGL K P A PP KGG L PS + T A K
Sbjct: 1161 GGLATPPPKGAPTTPAA-----TPPSPKGG-----LATPSPKGAPTT---PAATPPSPKG 1207
Query: 79 GSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPP 138
G +PK A T P P GG A P PT PAA T P
Sbjct: 1208 GLATPSPKGAPTTP--------------AATPPSPKGGLATPSPKGAPTTPAA--TPPSP 1251
Query: 139 SGGSA-----------AAQPPGSGGGKPPPPPPPAPQ---VAPPVPGGSP 174
GG A AA PP GG PP AP V PP P G P
Sbjct: 1252 KGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGP 1301
Score = 43.5 bits (101), Expect = 3e-04
Identities = 51/176 (28%), Positives = 57/176 (32%), Gaps = 32/176 (18%)
Query: 8 SPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWK 67
SP P G P PP+ GG PP KG PS
Sbjct: 1089 SPKGGPATPSPKGAPMPPAATPPSPK---GGLATPP-HKGAPTTPAATPPS--------- 1135
Query: 68 RLVAASAKKKKGSKKVTPK-----PASTGPDP---LVQQRNRENLLRKGRDPPDG-GGTA 118
K G PK PA+T P P L + PP GG A
Sbjct: 1136 --------PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA 1187
Query: 119 KPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP 174
P PT PAA T P GG A P G+ PP P +A P P G+P
Sbjct: 1188 TPSPKGAPTTPAA--TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1241
Score = 42.7 bits (99), Expect = 5e-04
Identities = 36/115 (31%), Positives = 40/115 (34%), Gaps = 25/115 (21%)
Query: 69 LVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDG-------GGTAKPL 121
L S+ KK PK P P KG P GG A P
Sbjct: 911 LSMTSSSPKKARATPAPKGIPASPSP------------KGAPTPPAATPPSPKGGPATPS 958
Query: 122 AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAP--PVPGGSP 174
PT PAA PPS A P G PP PP+P+ P P P G+P
Sbjct: 959 PKWAPTPPAAT----PPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAP 1009
Score = 42.0 bits (97), Expect = 9e-04
Identities = 56/170 (32%), Positives = 62/170 (36%), Gaps = 43/170 (25%)
Query: 19 GGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKKK 78
GGL K P A PP KGG L PS + T A K
Sbjct: 1184 GGLATPSPKGAPTTPAA-----TPPSPKGG-----LATPSPKGAPTT---PAATPPSPKG 1230
Query: 79 GSKKVTPK-----PASTGPDPLVQQRNRENLLRKG--RDPPDGGGTAKPLAVPVPTVPAA 131
G +PK PA+T P P KG PP G P A P P++
Sbjct: 1231 GLATPSPKGAPTTPAATPPSP------------KGGPATPPPKGAPTPPAATP-PSLKGG 1277
Query: 132 AATCEPPSGGS---AAAQPPGSGGGKPPPPPP---PAPQVA-PPVPGGSP 174
AT PP G+ A PP GG P PP P P A PP P GSP
Sbjct: 1278 LAT--PPHKGAPNPAVVTPPSPKGG-PATSPPKGAPTPPAATPPSPKGSP 1324
Score = 41.2 bits (95), Expect = 0.001
Identities = 48/181 (26%), Positives = 59/181 (32%), Gaps = 45/181 (24%)
Query: 5 LSLSPASSAKGRR---PGGLPEEKKK----APPAGDEALGGYGAPPVGKGGKGESRLKRP 57
LS++ +S K R P G+P PPA PP KGG K
Sbjct: 911 LSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAA--------TPPSPKGGPATPSPK-- 960
Query: 58 SVLISALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGT 117
W A+ TP P P P GG
Sbjct: 961 --------WAPTPPAATPPSPKGGPATPSPKGAPTPPAATP------------PSPKGGP 1000
Query: 118 AKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPP-PPPPAPQVAP---PVPGGS 173
A P PT PA PPS + A P G PP PP+P+ +P P+P G+
Sbjct: 1001 ATPSPKGAPTPPAVT----PPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGA 1056
Query: 174 P 174
P
Sbjct: 1057 P 1057
Score = 38.1 bits (87), Expect = 0.013
Identities = 50/177 (28%), Positives = 58/177 (32%), Gaps = 30/177 (16%)
Query: 8 SPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAP----PVGKGGKGESRLKRPSVLISA 63
+P P P K +P A G P P KGG LK +A
Sbjct: 1026 TPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAA 1085
Query: 64 LTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKG--RDPPDGGGTAKPL 121
+ KG+ PA+T P P KG PP G P
Sbjct: 1086 TPPSPKGGPATPSPKGAPM---PPAATPPSP------------KGGLATPPHKGAPTTPA 1130
Query: 122 AVPVPTVPAAAATCEPPSGG--SAAAQPPGSGGGKPPPPPPPA----PQVAPPVPGG 172
A P P+ AT PP G + AA PP GG PPP P PP P G
Sbjct: 1131 ATP-PSPKGGLAT-PPPKGAPTTPAATPPSPKGGLATPPPK-GAPTTPAATPPSPKG 1184
Score = 38.1 bits (87), Expect = 0.013
Identities = 47/170 (27%), Positives = 57/170 (33%), Gaps = 29/170 (17%)
Query: 8 SPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWK 67
SP P G P PP+ GG PP KG + + PS T
Sbjct: 1250 SPKGGPATPPPKGAPTPPAATPPS---LKGGLATPP-HKGAPNPAVVTPPSPKGGPAT-- 1303
Query: 68 RLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPT 127
KG+ TP PA+T P P G PP G T + P P
Sbjct: 1304 -------SPPKGAP--TP-PAATPPSPKGSP---------GTPPPKGAPTPPAVTPPSPK 1344
Query: 128 -VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRR 176
P AT GG P S G PP P+ + P + SP+R
Sbjct: 1345 GTPTLPATTPSSKGGPTT---PSSKEGPTPPAATPSHKGGPAMTPPSPKR 1391
Score = 36.2 bits (82), Expect = 0.048
Identities = 52/203 (25%), Positives = 73/203 (35%), Gaps = 30/203 (14%)
Query: 8 SPASSAKGRRPGGLPEEKKKAP--PAGDEALGGYGAPPVGKG---GKGESRLKRPSVLIS 62
+PA P P K +P PA G P KG KG + LK VL++
Sbjct: 1630 TPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKE--VLVA 1687
Query: 63 -ALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDP-----PDGGG 116
A ++ A +K +KK + PDP + ++ L P D
Sbjct: 1688 PAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSK 1747
Query: 117 TAK----------PLAVPVP--TVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQ 164
TAK PLA P + P AA E +P + P PP P
Sbjct: 1748 TAKGKDASHSPKGPLAPPESKASTPLTAAAFE-----KVLPKPESASVSAAPSPPVSLPL 1802
Query: 165 VAPPVPGGSPRRVIVQASTGELL 187
PVP P++ + +S G +L
Sbjct: 1803 APSPVPTLPPKQQFLPSSPGLVL 1825
Score = 34.7 bits (78), Expect = 0.14
Identities = 36/104 (34%), Positives = 39/104 (37%), Gaps = 19/104 (18%)
Query: 87 PASTGPDPLVQQRNRENLLRKGRDPPDGGGT-AKPLAVPVPTVPAAAATCEPPSGGSA-- 143
PA+ P + +K R P G A P PT PAA T P GG A
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAA--TPPSPKGGPATP 957
Query: 144 ---------AAQPPGSGGGKPPPPPP---PAPQVA-PPVPGGSP 174
AA PP GG P P P P P A PP P G P
Sbjct: 958 SPKWAPTPPAATPPSPKGG-PATPSPKGAPTPPAATPPSPKGGP 1000
Score = 33.5 bits (75), Expect = 0.31
Identities = 31/94 (32%), Positives = 33/94 (35%), Gaps = 16/94 (17%)
Query: 85 PKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAA 144
PK P P + L P T P +P P A T PP A
Sbjct: 896 PKEGPATPAP----KQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPT--PP-----A 944
Query: 145 AQPPGSGGGKPPPPPP---PAPQVA-PPVPGGSP 174
A PP GG P P P P P A PP P G P
Sbjct: 945 ATPPSPKGG-PATPSPKWAPTPPAATPPSPKGGP 977
Score = 29.6 bits (65), Expect = 4.5
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 12/111 (10%)
Query: 72 ASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPP---DGGGTAKPLAVPVPTV 128
A+ KK + PK A P V + + ++ P + P AV T
Sbjct: 1531 ATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTY 1590
Query: 129 PAAAATCE---PPSGGSAAAQPPGSGGGKPPPPPPPAPQVAP--PVPGGSP 174
A + E PP A P PP PP+P+ P P P G+P
Sbjct: 1591 KGAPSPKELLIPP----AVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTP 1637
Score = 29.3 bits (64), Expect = 5.8
Identities = 43/175 (24%), Positives = 57/175 (32%), Gaps = 22/175 (12%)
Query: 18 PGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKK 77
P P KKAP A G A P KG + PS + VA S+ K
Sbjct: 1436 PAVTPVSLKKAPATS--APKGGPATPSSKGDPTLPAVTPPSPKEPPAP--KQVATSSSPK 1491
Query: 78 KGSKKVTPKPASTGPD---------PLVQQRNRENLLRKG----RDPPDGGGTAKPLAVP 124
K P A T P P R+ + + P + L P
Sbjct: 1492 KAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPP 1551
Query: 125 VPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIV 179
TVP+ T P+ A A P PP P + AP SP+ +++
Sbjct: 1552 AMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAP-----SPKELLI 1601
Score = 28.9 bits (63), Expect = 7.6
Identities = 31/115 (26%), Positives = 41/115 (35%), Gaps = 21/115 (18%)
Query: 73 SAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAA 132
S+K+ VTP P P +E L+ PP P PT PA
Sbjct: 1575 SSKEASSPPAVTPSTYKGAPSP------KELLI-----PP---AVTSPSPKEAPTPPAVT 1620
Query: 133 ATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRV---IVQASTG 184
PPS A P G PP P + + +P P ++ + QAS G
Sbjct: 1621 ----PPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKG 1671
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 47.4 bits (111), Expect = 2e-05
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 18/119 (15%)
Query: 71 AASAKKKKGSKKVTPKPASTGPDPL---VQQRNRENLLRKGRDPPDGGGTA-KPLAVPVP 126
A A ++ + P A T P L V++ + L+R R P D P+AV P
Sbjct: 452 AMGASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSIEILPVAVATP 511
Query: 127 T---VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPP-----------PPAPQVAPPVPG 171
+ P PS A A P G PPPPP P AP APP+PG
Sbjct: 512 SGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPG 570
Score = 46.2 bits (108), Expect = 5e-05
Identities = 45/167 (26%), Positives = 55/167 (32%), Gaps = 23/167 (13%)
Query: 22 PEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKR-PSVLISALTWKRLVAASAKKKKGS 80
P E +KAPPA KG R+ R P +S ++ + G
Sbjct: 459 PPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSI----EILPVAVATPSGG 514
Query: 81 KKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPV---PTVPAAAATCEP 137
TP + P P + PP G P P P P + EP
Sbjct: 515 DAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEP 574
Query: 138 PSGGSAAAQ----------PPGSGGGKPPPPPPPAPQVAPPVPGGSP 174
P PPG+ G PPPPPPP PP PGG P
Sbjct: 575 PPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPP-----PPPPGGPP 616
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 46.2 bits (108), Expect = 5e-05
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 18/108 (16%)
Query: 66 WKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRD---PPDGGGTAKPLA 122
W AA+A G ++ TP+P + R+ + GRD P P
Sbjct: 42 WLDPAAAAAAAVAGGEQQTPEPEPG-------EAGRDGMGDSGRDSRSPDSSSPNPLPQG 94
Query: 123 VPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVP 170
VP P+ P PP S A P G G PPPPP P P + P P
Sbjct: 95 VPPPSPPG------PPLPPSTA--PSLGGSGAPPPPPMPPPPLGSPFP 134
Score = 38.1 bits (87), Expect = 0.013
Identities = 40/144 (27%), Positives = 52/144 (36%), Gaps = 24/144 (16%)
Query: 6 SLSPASSAKGRRPGGLPEEKKKAPPAGDE---ALGGYGAPPVGKGGKGESRLKRPSVLIS 62
S SP SS+ P G+P PP +LGG GAPP P +
Sbjct: 80 SRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPP------------PPMPPP 127
Query: 63 ALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLA 122
L V +S+ G P P +GP Q + +L GGG+ P
Sbjct: 128 PLGSPFPVISSSMGSPGLPPPAP-PGFSGPVSSPQINSTVSL--------PGGGSGPPED 178
Query: 123 VPVPTVPAAAATCEPPSGGSAAAQ 146
V P + C PP GG A +
Sbjct: 179 VKPPVLGVRGLHCPPPPGGPGAGK 202
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 46.2 bits (108), Expect = 5e-05
Identities = 38/112 (33%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 87 PASTGPDPLVQQRNR-----ENLLRK-----GRDPPDGGGTAKPLAVPVPTVPAAAATCE 136
P P+ + QQ+ + E++ R+ G P GG P P P P
Sbjct: 130 PNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGL- 188
Query: 137 PPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQASTGELLR 188
PPSG AAA G+GGG PPP PP P P GG+ + A G LR
Sbjct: 189 PPSGVPAAAH--GAGGG--PPPAPPLPAAQGPGGGGAGAPGLAAAIAGAKLR 236
Score = 43.5 bits (101), Expect = 3e-04
Identities = 30/86 (34%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 113 DGGGTAKPLAVPVPTVPAAAATCEP---------PSGG-----SAAAQPPGSGGGKPPPP 158
+GGG P A+P +VP + E PS S A PP G PPPP
Sbjct: 114 EGGGPPPPPALPTWSVPNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPP 173
Query: 159 PPPAPQVAPPVPGGSPRRVIVQASTG 184
P P P PP P G P + A+ G
Sbjct: 174 PGPPPPPGPPPPPGLPPSGVPAAAHG 199
Score = 28.9 bits (63), Expect = 7.6
Identities = 27/96 (28%), Positives = 33/96 (34%), Gaps = 17/96 (17%)
Query: 85 PKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAA 144
P P + GP P PP G P +P VPAAA +GG
Sbjct: 163 PAPPAGGPPP-------------PPGPPPPPGPPPPPGLPPSGVPAAAHG----AGGGPP 205
Query: 145 AQPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQ 180
PP P AP +A + G R+V Q
Sbjct: 206 PAPPLPAAQGPGGGGAGAPGLAAAIAGAKLRKVSKQ 241
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 46.2 bits (108), Expect = 5e-05
Identities = 40/148 (27%), Positives = 56/148 (37%), Gaps = 22/148 (14%)
Query: 33 DEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKRLVAAS--AKKKKGSKKVTPKPAST 90
D Y + G G +R KRP + + + +A+ + + + TP P +T
Sbjct: 248 DSKESAYVVVGITSWGVGCARAKRPGIYTATWPYLNWIASKIGSNALRMIQSATPPPPTT 307
Query: 91 GPDPLVQQRNRENLLRKGRDPPDGGGTA------KPLAVPVPTVPAAAATCEPPSGGSAA 144
P P+ R P +A +P P+P P AA PPS
Sbjct: 308 RPPPI-------------RPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSP-PPP 353
Query: 145 AQPPGSGGGKPPPPPPPAPQVAPPVPGG 172
PP S PPPPPPP P +P G
Sbjct: 354 PPPPASPLPPPPPPPPPTPSSTTKLPQG 381
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 46.2 bits (108), Expect = 5e-05
Identities = 31/88 (35%), Positives = 37/88 (42%), Gaps = 15/88 (17%)
Query: 101 RENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEP-PSGGSAAAQPPGSGG---GKPP 156
R+ +++ G PL VP PT AAA P P+GG P G PP
Sbjct: 1515 RQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPP 1574
Query: 157 PPPPP-----------APQVAPPVPGGS 173
PPPP APQ +PP PG S
Sbjct: 1575 LPPPPESGPGQPGWEGAPQPSPPPPGPS 1602
Score = 32.0 bits (71), Expect = 0.90
Identities = 28/85 (32%), Positives = 33/85 (38%), Gaps = 25/85 (29%)
Query: 120 PLAVPVPTVPAAAATCEPPSGGSAAAQPPG-SGGGK-----------------PPPPPPP 161
P P P AAA + P+ PPG S GK P PPP
Sbjct: 840 PAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPK 899
Query: 162 APQVAP---PVPGGS----PRRVIV 179
A V+P P PGGS P +V+V
Sbjct: 900 AQSVSPVQAPPPGGSAQLLPGKVLV 924
Score = 32.0 bits (71), Expect = 0.90
Identities = 41/165 (24%), Positives = 51/165 (30%), Gaps = 20/165 (12%)
Query: 28 APPAGDEALGGY-GAP-PVGKGGKGESRLKRPSVLISALTWKRLVAASAKKKKGSKKVTP 85
A P G Y G+P P + PS++ + T AA+ K T
Sbjct: 1085 AAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPPAPATA 1144
Query: 86 KPASTGPDPLVQQRNRENLL---RKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGS 142
PA T P P + L + R P K +P A P G
Sbjct: 1145 TPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRP--GP 1202
Query: 143 AAAQPPGSG-------------GGKPPPPPPPAPQVAPPVPGGSP 174
A QP G G PP PPP P+ P SP
Sbjct: 1203 APRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSP 1247
Score = 31.6 bits (70), Expect = 1.2
Identities = 32/112 (28%), Positives = 40/112 (35%), Gaps = 31/112 (27%)
Query: 83 VTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPA--AAATCEPPSG 140
+ P A + PDP VQ + + P+A PA AA E P G
Sbjct: 40 LVPFLAPSQPDPSVQPSEAQQ------------PASHPVASNQSKEPAESAAVAHERPPG 87
Query: 141 GSAAAQP--------PGSGGGKPPPP---------PPPAPQVAPPVPGGSPR 175
G+ +A P P S G PP P PPP + P G PR
Sbjct: 88 GTGSADPERPPGATCPESPGPGPPHPLGVVESGKGPPPTTEEEASGPPGEPR 139
Score = 31.2 bits (69), Expect = 1.5
Identities = 28/77 (36%), Positives = 30/77 (38%), Gaps = 16/77 (20%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQP----------PGSG---GGKPPP 157
PP T P A P +P A G A PG G G+PP
Sbjct: 1232 PPPLPETWTPTARSSPPLPPPAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPPT 1291
Query: 158 PPPPAPQVAPPV-PGGS 173
PP PAP AP V PGGS
Sbjct: 1292 PPSPAP--APAVAPGGS 1306
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 115 GGTAKPLAVPVP-----TVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPV 169
G TA PL P P P+ A P + + P S GG PP P + APP
Sbjct: 565 GSTAGPLRPPPPGAGGPATPSKATRFLPMDPATFRRKRPESVGGLEPPGP--SVIAAPPS 622
Query: 170 PGGSPRRVIV 179
GG+ + +V
Sbjct: 623 GGGNILQTLV 632
Score = 30.0 bits (66), Expect = 3.4
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 110 DPP----DGGGTAKPLAVPVP-TVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQ 164
DPP G G+A + P + A+AAT G+ AQ G G P PPP
Sbjct: 519 DPPVAFGKGYGSAPSSSASSPASSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGA 578
Query: 165 VAPPVPGGSPRRVIVQAST 183
P P + R + + +T
Sbjct: 579 GGPATPSKATRFLPMDPAT 597
Score = 29.6 bits (65), Expect = 4.5
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 129 PAAAATCEPPSGGSAAA--QPPGSGGGKPPPPPPPAPQVAPPVPGGSPRRVIVQASTG 184
P A+ + P+ +A A +PPG G P PP A P PG +V++ G
Sbjct: 65 PVASNQSKEPAESAAVAHERPPGGTGSADPERPPGATCPESPGPGPPHPLGVVESGKG 122
Score = 28.5 bits (62), Expect = 10.0
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 24/95 (25%)
Query: 112 PDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQP--------PGSGGGKPP------- 156
P GG+A+ L V VP AA + GG+ P P G +PP
Sbjct: 909 PPPGGSAQLLPGKV-LVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLT 967
Query: 157 PPP--------PPAPQVAPPVPGGSPRRVIVQAST 183
P P PP P P P++V++ +ST
Sbjct: 968 PVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSST 1002
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 45.8 bits (107), Expect = 6e-05
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Query: 85 PKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAA 144
P+P P Q + + ++ +G P G G+A P + P + P SG
Sbjct: 91 PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPT 150
Query: 145 AQPPGSGGGKPPPPPPPAP-----QVAPPVPGGSP 174
PP + PP PPP P PP GG P
Sbjct: 151 PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPP 185
Score = 38.1 bits (87), Expect = 0.013
Identities = 33/111 (29%), Positives = 38/111 (34%), Gaps = 12/111 (10%)
Query: 72 ASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPP----DGGGTAKPLAVPVPT 127
AS+ + + P +GP P G PP G T P A P
Sbjct: 127 ASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPP 186
Query: 128 VPAAAATCEPPSGGSAAAQPPGSGG---GKPPPPPPPAPQVAPPVPGGSPR 175
PAA P G Q PG GG GK P P P PGG P+
Sbjct: 187 PPAAV-----PGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPK 232
Score = 35.4 bits (80), Expect = 0.082
Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 105 LRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQ 164
L + R P G P+P P +PP QPP +PPP P P Q
Sbjct: 40 LNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPH---QPPPHPQPHQQ 96
Query: 165 VAPPVPGGSPRRVIVQASTG 184
PP P + +V G
Sbjct: 97 QQPPPPPQDSSKPVVAQGPG 116
Score = 34.3 bits (77), Expect = 0.18
Identities = 26/97 (26%), Positives = 33/97 (34%), Gaps = 16/97 (16%)
Query: 85 PKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAA 144
PKP P P QQ+ + PP +P P P +PP +
Sbjct: 56 PKPPIPPPPPHQQQQ---------QPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDS 106
Query: 145 AQP-------PGSGGGKPPPPPPPAPQVAPPVPGGSP 174
++P P G G PP AP PP G P
Sbjct: 107 SKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPP 143
Score = 30.0 bits (66), Expect = 3.4
Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 35/100 (35%)
Query: 85 PKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAA 144
P P P P Q+ + PP ++KP+ P P+ G +
Sbjct: 82 PPPHQPPPHPQPHQQQQP--------PPPPQDSSKPVVAQGPG----------PAPGVGS 123
Query: 145 A----------------QPPGSGGGKPPPPPPPAPQVAPP 168
A PPGSG G P P PPPA APP
Sbjct: 124 APPASSSAPPATPPTSGAPPGSGPG-PTPTPPPAVTSAPP 162
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 45.8 bits (107), Expect = 6e-05
Identities = 33/95 (34%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
Query: 86 KPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPV-------PTVPAAAATCEPP 138
KP P P Q K + PP G KP P P P PP
Sbjct: 46 KPQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGDKSRSPRSPPGKPQGPPP 102
Query: 139 SGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGS 173
GG PP GG KP PPPP PP GGS
Sbjct: 103 QGGKPQGPPP-QGGNKPQGPPPPGKPQGPPAQGGS 136
Score = 38.1 bits (87), Expect = 0.013
Identities = 28/90 (31%), Positives = 33/90 (36%), Gaps = 14/90 (15%)
Query: 96 VQQRNRENLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKP 155
V Q +L+ P G KP P P PP GG+ PP G +
Sbjct: 23 VSQEESPSLIAGNPQGPSPQGGNKPQG---PPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 79
Query: 156 PPP----------PPPAPQVAPPVPGGSPR 175
PPP PP PQ PP GG P+
Sbjct: 80 PPPQGDKSRSPRSPPGKPQ-GPPPQGGKPQ 108
Score = 37.0 bits (84), Expect = 0.028
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 107 KGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKP--PPPPPPAPQ 164
K + PP GG KP P P P PP G + + P S GKP PPP PQ
Sbjct: 56 KPQGPPPQGGN-KPQGPPPPGKPQGP----PPQGDKSRS--PRSPPGKPQGPPPQGGKPQ 108
Query: 165 VAPPVPGGSPR 175
PP G P+
Sbjct: 109 GPPPQGGNKPQ 119
Score = 35.0 bits (79), Expect = 0.11
Identities = 28/82 (34%), Positives = 31/82 (37%), Gaps = 18/82 (21%)
Query: 107 KGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGS---AAAQPPGSGGGKP-------- 155
K + PP GG KP P P P P GGS +A PPG G P
Sbjct: 106 KPQGPPPQGGN-KPQGPPPPGKPQGP----PAQGGSKSQSARSPPGKPQGPPQQEGNNPQ 160
Query: 156 --PPPPPPAPQVAPPVPGGSPR 175
PPP PQ P G P+
Sbjct: 161 GPPPPAGGNPQQPQAPPAGQPQ 182
Score = 33.5 bits (75), Expect = 0.31
Identities = 50/183 (27%), Positives = 55/183 (30%), Gaps = 52/183 (28%)
Query: 15 GRRPGGLPEEKKKAPPAGDEALGG---YGAPPVGK-------GGKGESRLKRPSVLISAL 64
G +P G P K P G GG G PP GK G K S P
Sbjct: 44 GNKPQGPPPPPGK--PQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPG------ 95
Query: 65 TWKRLVAASAKKKKGSKKVTPKPAS----TGPDPLVQQRNRENLLRKGRDPPDGGGTAKP 120
+G K P P GP P K + PP GG+
Sbjct: 96 ------KPQGPPPQGGKPQGPPPQGGNKPQGPPPP----------GKPQGPPAQGGSKSQ 139
Query: 121 LAVPVPTVPAAAATCE-------PPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGS 173
A P P E PP G QP G+P PP P PQ GG
Sbjct: 140 SARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP-PQ------GGR 192
Query: 174 PRR 176
P R
Sbjct: 193 PSR 195
Score = 29.3 bits (64), Expect = 5.8
Identities = 35/154 (22%), Positives = 47/154 (30%), Gaps = 30/154 (19%)
Query: 15 GRRPGGLPEEKKKA--PPAGDEALGGYGAP-----PVGKGGKGESRLKRPSVLISALTWK 67
G +P G P K PP GD++ P P +GGK +
Sbjct: 65 GNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQG--------------- 109
Query: 68 RLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPLAVPVPT 127
+ G+K P P P Q ++ R P G + P
Sbjct: 110 ------PPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPP 163
Query: 128 VPAAAATCEP--PSGGSAAAQPPGSGGGKPPPPP 159
PA +P P G P GG+P PP
Sbjct: 164 PPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 197
>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
Length = 873
Score = 45.8 bits (107), Expect = 6e-05
Identities = 50/179 (27%), Positives = 63/179 (35%), Gaps = 17/179 (9%)
Query: 2 GTVLSLSPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLI 61
G LSL+P + GR + +PP A G G P V +G P +
Sbjct: 603 GQALSLAPTPAEHGRSEVVDLTRRAGSPPGPPGAGGQLGFPGVLQG---------PQDGV 653
Query: 62 SALTWKRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRENLLRKGRDPPDGGGTAKPL 121
LT V A+ + +P +R R G P G P
Sbjct: 654 IDLT----VGHRARLHNVIHRALHAHVKAEREPSAAERRTCGGCRDGHCSPPAAGDPGPG 709
Query: 122 AVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPP-PPPAPQVAPPVPGGSPRRVIV 179
A P P AAA C G+ A G+ +PPP PPP P APP SP V
Sbjct: 710 A---PAGPEAAAACNVIVNGTRGAAAEGAKSAEPPPEQPPPPPPPAPPKKLLSPEEPAV 765
Score = 34.7 bits (78), Expect = 0.14
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 85 PKPASTGPDPLVQQRNRENLLRKGRDPPDGGG-TAKPLAVPVPTVPAAAATCEPPSGGSA 143
P AS PL N + G PP GG P + P+ P + PPS +
Sbjct: 416 PHHASNPNSPL------SNPMLPGIGPPPGGPRNLGPTSSPMHR-PMLSPHIHPPSTPTM 468
Query: 144 AAQPPGSGGGKPPPPPPPAPQVAPPVP 170
PPG PPPPP AP + P P
Sbjct: 469 PGNPPGL----LPPPPPGAPLPSLPFP 491
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 117 TAKPLAVPVPT-VPAAAATCEPPSGGSAAAQPPGSGG---GKPPPPPPPAPQVAPPVP 170
TA +PT VP + E P+ + QPP S G G PP PP PVP
Sbjct: 337 TANCSVTKIPTPVPKSIPISETPNIPPVSVQPPASIGPPLGVPPRSPPMVMTNRGPVP 394
>gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo
sapiens]
Length = 1029
Score = 45.4 bits (106), Expect = 8e-05
Identities = 52/187 (27%), Positives = 72/187 (38%), Gaps = 28/187 (14%)
Query: 19 GGLPEEKKKAPPAGDEALGGYG-APPVGKGGKGESRLKRPSVLISALTWKRLVAASAKKK 77
G + EE D + G+G PP G+ K E +R L+ K+ KKK
Sbjct: 6 GEVSEESSSKVEQEDFVMEGHGKTPPPGEESKQEKEQEREEQLMED---KKRKKEDKKKK 62
Query: 78 KGSKKVTPKPASTGP--DPLVQQRNRENLLRKGRDPP-DGGGTAKPLAVPVPTVPAAAAT 134
+ ++KVT + P + Q + + PP +GG AK +AVP P+AA
Sbjct: 63 EATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARY 122
Query: 135 CE---PPSGGSAAAQPPGSGGGKPPPP----------PPPAPQVAPPVPGGSPRRVIVQA 181
PP G+PPPP PPP PG +P V
Sbjct: 123 MPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPC-----TAPGANPNNAQV-- 175
Query: 182 STGELLR 188
TG LL+
Sbjct: 176 -TGALLQ 181
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 45.4 bits (106), Expect = 8e-05
Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 118 AKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPP------PPPAPQVAPPVPG 171
+K L +P P PAAA+T P A PP G PP P PP AP APP P
Sbjct: 2010 SKSLGLPHPGAPAAASTATLPQRTLAMPAPP--AGTAPPAPGPTPAEPPTAPSAAPPAPS 2067
Query: 172 GSPRR 176
P R
Sbjct: 2068 TEPPR 2072
Score = 30.8 bits (68), Expect = 2.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 111 PPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGG 152
P GTA P P P P A + PP + + +PP +GG
Sbjct: 2037 PAPPAGTAPPAPGPTPAEPPTAPSAAPP---APSTEPPRAGG 2075
>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 45.4 bits (106), Expect = 8e-05
Identities = 49/184 (26%), Positives = 63/184 (34%), Gaps = 22/184 (11%)
Query: 8 SPASSAKGRRPGGLPEEKKKAPPAGDEALGGYG---APPVGKGGKGESRL----KRPSVL 60
SP A+ R+ G+PEE G G G GG G+ R KRP
Sbjct: 104 SPPPPARARQENGMPEEPATTARGGPGKAGSRGRFAGHSEAGGGSGDRRRAGPEKRPKSS 163
Query: 61 ISALTWKRLVAASAKKKKGSKKVTPKPASTGPDP-LVQQRNRENLLRKGRDPPDGGGTAK 119
+ + + G TP+PA L R R D P G +
Sbjct: 164 REGSGGPQESSRDKRPLSGPDVGTPQPAGLASGAKLAAGRPFNTYPRADTDHPSRGAQGE 223
Query: 120 PLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPP------------PPPPAPQVAP 167
P V P P+A P S S++++PP G P P PP AP
Sbjct: 224 PHDV-APNGPSAGGLAIPQSS-SSSSRPPTRARGAPSPGVLGPHASEPQLAPPACTPAAP 281
Query: 168 PVPG 171
VPG
Sbjct: 282 AVPG 285
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,386,077
Number of Sequences: 37866
Number of extensions: 1395354
Number of successful extensions: 31005
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 1172
Number of HSP's that attempted gapping in prelim test: 12243
Number of HSP's gapped (non-prelim): 11239
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.