Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: B3GALT2 Sequence: fasta or formatted (422aa) NCBI GI: 4502339
Description:

UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         21           2
 C cysteine            1.9          8           2
 D aspartate           2.8         12           1
 E glutamate           5.0         21           2
 F phenylalanine       5.0         21           2
 G glycine             5.5         23           1
 H histidine           4.3         18           2
 I isoleucine          5.9         25           2
 K lysine              5.9         25           1
 L leucine            10.0         42           2
 M methionine          2.1          9           1
 N asparagine          6.6         28           2
 P proline             5.9         25           3
 Q glutamine           3.8         16           2
 R arginine            6.4         27           3
 S serine              6.4         27           2
 T threonine           5.9         25           1
 V valine              3.8         16           1
 W tryptophan          2.1          9           1
 Y tyrosine            5.7         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [... 
B3GALT1               0.321   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALT5               0.228   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.228   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.228   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.228   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.228   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [...
B3GALNT1              0.191   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.191   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.191   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.191   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.191   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
B3GNT5                0.177   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT2                0.161   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
B3GNT7                0.160   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT6                0.156   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT9                0.136   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
LOC100289720          0.134   PREDICTED: hypothetical protein XP_002347139 
LOC100288842          0.134   PREDICTED: hypothetical protein XP_002342992 
B3GNT4                0.134   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT3                0.124   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT8                0.123   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALT4               0.108   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [...
B3GALNT2              0.058   beta-1,3-N-acetylgalactosaminyltransferase 2 
B3GALT6               0.051   beta-1,3-galactosyltransferase 6 
RPS6KA5               0.006   ribosomal protein S6 kinase, polypeptide 5 isoform a...
WDR75                 0.006   WD repeat domain 75 
WNK3                  0.005   WNK lysine deficient protein kinase 3 isoform 1 [Hom...
WNK3                  0.005   WNK lysine deficient protein kinase 3 isoform 2 [Hom...
GPATCH8               0.005   G patch domain containing 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press