JMJD6 2818

Name: JMJD6	Sequence: fasta or formatted (403aa)		NCBI GI: 125988389
Description: jumonji domain containing 6 isoform 2		Referenced in: Histones, Related Proteins, and Modifying Enzymes Additional Protein Modifications
Other entries for this name: alt prot [414aa] jumonji domain containing 6 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 18 2 C cysteine 1.2 5 1 D aspartate 6.5 26 2 E glutamate 7.4 30 2 F phenylalanine 3.5 14 2 G glycine 5.5 22 2 H histidine 2.2 9 1 I isoleucine 3.2 13 1 K lysine 7.4 30 2 L leucine 6.7 27 2 M methionine 1.5 6 1 N asparagine 3.2 13 1 P proline 6.0 24 2 Q glutamine 3.5 14 2 R arginine 7.9 32 2 S serine 11.2 45 10 T threonine 5.7 23 2 V valine 6.0 24 2 W tryptophan 3.0 12 2 Y tyrosine 4.0 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 jumonji domain containing 6 isoform 2 JMJD6 1.000 jumonji domain containing 6 isoform 1 JMJD4 0.079 jumonji domain containing 4 isoform 2 JMJD4 0.079 jumonji domain containing 4 isoform 1 JMJD8 0.049 jumonji domain containing 8 HSPBAP1 0.028 Hspb associated protein 1 CIR1 0.025 CBF1 interacting corepressor PHF8 0.025 PHD finger protein 8 FAM133A 0.021 hypothetical protein LOC286499 JHDM1D 0.020 jumonji C domain containing histone demethylase 1 ho... AFF3 0.020 AF4/FMR2 family, member 3 isoform 2 AFF3 0.020 AF4/FMR2 family, member 3 isoform 1 SRRM2 0.020 splicing coactivator subunit SRm300 DSPP 0.018 dentin sialophosphoprotein preproprotein PHF2 0.018 PHD finger protein 2 TNRC18 0.018 trinucleotide repeat containing 18 ARL6IP4 0.018 SRp25 nuclear protein isoform 4 ARL6IP4 0.018 SRp25 nuclear protein isoform 3 ARL6IP4 0.018 SRp25 nuclear protein isoform 2 ARL6IP4 0.018 SRp25 nuclear protein isoform 1 KDM2B 0.017 F-box and leucine-rich repeat protein 10 isoform a [... KDM2B 0.017 F-box and leucine-rich repeat protein 10 isoform b [... FAM133B 0.017 hypothetical protein LOC257415 isoform 2 FAM133B 0.017 hypothetical protein LOC257415 isoform 1 LOC643446 0.017 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.017 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.017 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.017 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.017 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.017 PREDICTED: similar to ribonucleic acid binding prote... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.