Search of human proteins with 41872389

Search of human proteins with 41872389

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41872389 flavin adenine dinucleotide synthetase isoform 1
[Homo sapiens]
         (587 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41872389 flavin adenine dinucleotide synthetase isoform 1 [Ho...  1203   0.0  
gi|41872403 flavin adenine dinucleotide synthetase isoform 2 [Ho...   994   0.0  
gi|169234778 potassium channel tetramerisation domain containing...    33   0.73 
gi|32698700 PHD finger protein 8 [Homo sapiens]                        32   1.6  
gi|10880983 gephyrin isoform 1 [Homo sapiens]                          32   2.1  
gi|66932975 gephyrin isoform 2 [Homo sapiens]                          32   2.1  
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]        31   2.8  
gi|32490572 erythrocyte membrane protein band 4.1-like 3 [Homo s...    30   4.7  

>gi|41872389 flavin adenine dinucleotide synthetase isoform 1 [Homo
           sapiens]
          Length = 587

 Score = 1203 bits (3112), Expect = 0.0
 Identities = 587/587 (100%), Positives = 587/587 (100%)

Query: 1   MGWDLGTRLFQRQEQRSRLSRIWLEKTRVFLEGSTRTPALPHCLFWLLQVPSTQDPLFPG 60
           MGWDLGTRLFQRQEQRSRLSRIWLEKTRVFLEGSTRTPALPHCLFWLLQVPSTQDPLFPG
Sbjct: 1   MGWDLGTRLFQRQEQRSRLSRIWLEKTRVFLEGSTRTPALPHCLFWLLQVPSTQDPLFPG 60

Query: 61  YGPQCPVDLAGPPCLRPLFGGLGGYWRALQRGREGRTMTSRASELSPGRSVTAGIIIVGD 120
           YGPQCPVDLAGPPCLRPLFGGLGGYWRALQRGREGRTMTSRASELSPGRSVTAGIIIVGD
Sbjct: 61  YGPQCPVDLAGPPCLRPLFGGLGGYWRALQRGREGRTMTSRASELSPGRSVTAGIIIVGD 120

Query: 121 EILKGHTQDTNTFFLCRTLRSLGVQVCRVSVVPDEVATIAAEVTSFSNRFTHVLTAGGIG 180
           EILKGHTQDTNTFFLCRTLRSLGVQVCRVSVVPDEVATIAAEVTSFSNRFTHVLTAGGIG
Sbjct: 121 EILKGHTQDTNTFFLCRTLRSLGVQVCRVSVVPDEVATIAAEVTSFSNRFTHVLTAGGIG 180

Query: 181 PTHDDVTFEAVAQAFGDELKPHPKLEAATKALGGEGWEKLSLVPSSARLHYGTDPCTGQP 240
           PTHDDVTFEAVAQAFGDELKPHPKLEAATKALGGEGWEKLSLVPSSARLHYGTDPCTGQP
Sbjct: 181 PTHDDVTFEAVAQAFGDELKPHPKLEAATKALGGEGWEKLSLVPSSARLHYGTDPCTGQP 240

Query: 241 FRFPLVSVRNVYLFPGIPELLRRVLEGMKGLFQNPAVQFHSKELYVAADEASIAPILAEA 300
           FRFPLVSVRNVYLFPGIPELLRRVLEGMKGLFQNPAVQFHSKELYVAADEASIAPILAEA
Sbjct: 241 FRFPLVSVRNVYLFPGIPELLRRVLEGMKGLFQNPAVQFHSKELYVAADEASIAPILAEA 300

Query: 301 QAHFGRRLGLGSYPDWGSNYYQVKLTLDSEEEGPLEECLAYLTARLPQGSLVPYMPNAVE 360
           QAHFGRRLGLGSYPDWGSNYYQVKLTLDSEEEGPLEECLAYLTARLPQGSLVPYMPNAVE
Sbjct: 301 QAHFGRRLGLGSYPDWGSNYYQVKLTLDSEEEGPLEECLAYLTARLPQGSLVPYMPNAVE 360

Query: 361 QASEAVYKLAESGSSLGKKVAGALQTIETSLAQYSLTQLCVGFNGGKDCTALLHLFHAAV 420
           QASEAVYKLAESGSSLGKKVAGALQTIETSLAQYSLTQLCVGFNGGKDCTALLHLFHAAV
Sbjct: 361 QASEAVYKLAESGSSLGKKVAGALQTIETSLAQYSLTQLCVGFNGGKDCTALLHLFHAAV 420

Query: 421 QRKLPDVPNPLQILYIRSISPFPELEQFLQDTIKRYNLQMLEAEGSMKQALGELQARHPQ 480
           QRKLPDVPNPLQILYIRSISPFPELEQFLQDTIKRYNLQMLEAEGSMKQALGELQARHPQ
Sbjct: 421 QRKLPDVPNPLQILYIRSISPFPELEQFLQDTIKRYNLQMLEAEGSMKQALGELQARHPQ 480

Query: 481 LEAVLMGTRRTDPYSCSLCPFSPTDPGWPAFMRINPLLDWTYRDIWDFLRQLFVPYCILY 540
           LEAVLMGTRRTDPYSCSLCPFSPTDPGWPAFMRINPLLDWTYRDIWDFLRQLFVPYCILY
Sbjct: 481 LEAVLMGTRRTDPYSCSLCPFSPTDPGWPAFMRINPLLDWTYRDIWDFLRQLFVPYCILY 540

Query: 541 DRGYTSLGSRENTVRNPALKCLSPGGHPTYRPAYLLENEEEERNSRT 587
           DRGYTSLGSRENTVRNPALKCLSPGGHPTYRPAYLLENEEEERNSRT
Sbjct: 541 DRGYTSLGSRENTVRNPALKCLSPGGHPTYRPAYLLENEEEERNSRT 587


>gi|41872403 flavin adenine dinucleotide synthetase isoform 2 [Homo
           sapiens]
          Length = 490

 Score =  994 bits (2570), Expect = 0.0
 Identities = 490/490 (100%), Positives = 490/490 (100%)

Query: 98  MTSRASELSPGRSVTAGIIIVGDEILKGHTQDTNTFFLCRTLRSLGVQVCRVSVVPDEVA 157
           MTSRASELSPGRSVTAGIIIVGDEILKGHTQDTNTFFLCRTLRSLGVQVCRVSVVPDEVA
Sbjct: 1   MTSRASELSPGRSVTAGIIIVGDEILKGHTQDTNTFFLCRTLRSLGVQVCRVSVVPDEVA 60

Query: 158 TIAAEVTSFSNRFTHVLTAGGIGPTHDDVTFEAVAQAFGDELKPHPKLEAATKALGGEGW 217
           TIAAEVTSFSNRFTHVLTAGGIGPTHDDVTFEAVAQAFGDELKPHPKLEAATKALGGEGW
Sbjct: 61  TIAAEVTSFSNRFTHVLTAGGIGPTHDDVTFEAVAQAFGDELKPHPKLEAATKALGGEGW 120

Query: 218 EKLSLVPSSARLHYGTDPCTGQPFRFPLVSVRNVYLFPGIPELLRRVLEGMKGLFQNPAV 277
           EKLSLVPSSARLHYGTDPCTGQPFRFPLVSVRNVYLFPGIPELLRRVLEGMKGLFQNPAV
Sbjct: 121 EKLSLVPSSARLHYGTDPCTGQPFRFPLVSVRNVYLFPGIPELLRRVLEGMKGLFQNPAV 180

Query: 278 QFHSKELYVAADEASIAPILAEAQAHFGRRLGLGSYPDWGSNYYQVKLTLDSEEEGPLEE 337
           QFHSKELYVAADEASIAPILAEAQAHFGRRLGLGSYPDWGSNYYQVKLTLDSEEEGPLEE
Sbjct: 181 QFHSKELYVAADEASIAPILAEAQAHFGRRLGLGSYPDWGSNYYQVKLTLDSEEEGPLEE 240

Query: 338 CLAYLTARLPQGSLVPYMPNAVEQASEAVYKLAESGSSLGKKVAGALQTIETSLAQYSLT 397
           CLAYLTARLPQGSLVPYMPNAVEQASEAVYKLAESGSSLGKKVAGALQTIETSLAQYSLT
Sbjct: 241 CLAYLTARLPQGSLVPYMPNAVEQASEAVYKLAESGSSLGKKVAGALQTIETSLAQYSLT 300

Query: 398 QLCVGFNGGKDCTALLHLFHAAVQRKLPDVPNPLQILYIRSISPFPELEQFLQDTIKRYN 457
           QLCVGFNGGKDCTALLHLFHAAVQRKLPDVPNPLQILYIRSISPFPELEQFLQDTIKRYN
Sbjct: 301 QLCVGFNGGKDCTALLHLFHAAVQRKLPDVPNPLQILYIRSISPFPELEQFLQDTIKRYN 360

Query: 458 LQMLEAEGSMKQALGELQARHPQLEAVLMGTRRTDPYSCSLCPFSPTDPGWPAFMRINPL 517
           LQMLEAEGSMKQALGELQARHPQLEAVLMGTRRTDPYSCSLCPFSPTDPGWPAFMRINPL
Sbjct: 361 LQMLEAEGSMKQALGELQARHPQLEAVLMGTRRTDPYSCSLCPFSPTDPGWPAFMRINPL 420

Query: 518 LDWTYRDIWDFLRQLFVPYCILYDRGYTSLGSRENTVRNPALKCLSPGGHPTYRPAYLLE 577
           LDWTYRDIWDFLRQLFVPYCILYDRGYTSLGSRENTVRNPALKCLSPGGHPTYRPAYLLE
Sbjct: 421 LDWTYRDIWDFLRQLFVPYCILYDRGYTSLGSRENTVRNPALKCLSPGGHPTYRPAYLLE 480

Query: 578 NEEEERNSRT 587
           NEEEERNSRT
Sbjct: 481 NEEEERNSRT 490


>gi|169234778 potassium channel tetramerisation domain containing 17
           [Homo sapiens]
          Length = 297

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 47/205 (22%), Positives = 75/205 (36%), Gaps = 32/205 (15%)

Query: 324 KLTLDSE--EEGPLEECLAYLTARLPQGSLVPYMPNAVEQASEAVYKLAESGSSLGKKVA 381
           KL LD +  EEG LEE   Y       G L+  + + +E+    V ++        K V 
Sbjct: 96  KLVLDKDMAEEGVLEEAEFYNI-----GPLIRIIKDRMEEKDYTVTQVPP------KHVY 144

Query: 382 GALQTIETSLAQY-----------SLTQLCVGFNGGKDCTALLHLFHAAVQRKLPDVPNP 430
             LQ  E  L Q             L  +   +N G +  A    F   V ++L   PN 
Sbjct: 145 RVLQCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAE---FLCVVSKELHSTPNG 201

Query: 431 LQILYIRSISPFPEL---EQFLQDTIKRYNLQMLEAEGSMKQALGELQARHPQLEAVLMG 487
           L     R      E    +Q  ++ ++   ++ ++ E   ++         P+ E  +  
Sbjct: 202 LSSESSRKTKSTEEQLEEQQQQEEEVEEVEVEQVQVEADAQEKGSRPHPLRPEAELAVRA 261

Query: 488 TRR--TDPYSCSLCPFSPTDPGWPA 510
           + R    P SC  C + P  PG  A
Sbjct: 262 SPRPLARPQSCHPCCYKPEAPGCEA 286


>gi|32698700 PHD finger protein 8 [Homo sapiens]
          Length = 1024

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 541 DRGYTSLGSRENTVRNPALKCLSPGGHPTYRPAY-LLENEEEERNS 585
           DR   S  S   TV N      +PG  P  RPAY   E+EEEE N+
Sbjct: 752 DRSSGSSSSGLGTVSNSPASQRTPGKRPIKRPAYWRTESEEEEENA 797


>gi|10880983 gephyrin isoform 1 [Homo sapiens]
          Length = 769

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 111 VTAGIIIVGDEILKGHTQDTNTFFLCRTLRS---LGVQVCRVSVVPDEVATIAAEVTSFS 167
           +  G++ V D   +   +D +   L   ++    LG  +    +VPDE+  I   +  + 
Sbjct: 15  IRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWC 74

Query: 168 NR--FTHVLTAGGIGPTHDDVTFEAVAQAFGDE 198
           +      +LT GG G    DVT EA  +    E
Sbjct: 75  DEKELNLILTTGGTGFAPRDVTPEATKEVIERE 107


>gi|66932975 gephyrin isoform 2 [Homo sapiens]
          Length = 736

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 111 VTAGIIIVGDEILKGHTQDTNTFFLCRTLRS---LGVQVCRVSVVPDEVATIAAEVTSFS 167
           +  G++ V D   +   +D +   L   ++    LG  +    +VPDE+  I   +  + 
Sbjct: 15  IRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWC 74

Query: 168 NR--FTHVLTAGGIGPTHDDVTFEAVAQAFGDE 198
           +      +LT GG G    DVT EA  +    E
Sbjct: 75  DEKELNLILTTGGTGFAPRDVTPEATKEVIERE 107


>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
          Length = 818

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 16/66 (24%)

Query: 51  PSTQDPL--------FPGYGPQCPVDLAGPPCLRPLFGGLGGYWRALQRGREGRTMTSRA 102
           PS Q P          P   P+ P+D    P L P   GLG     LQ G E RT T+++
Sbjct: 541 PSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSP--SGLG-----LQPGPE-RTSTTKS 592

Query: 103 SELSPG 108
            ELSPG
Sbjct: 593 KELSPG 598


>gi|32490572 erythrocyte membrane protein band 4.1-like 3 [Homo
            sapiens]
          Length = 1087

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 25/112 (22%)

Query: 94   EGRTMTSRASELSPGRSVTAGIIIVGDEILKGHTQDTNTFFLCRTLRSLGVQVCRVSVVP 153
            E +T+T  +S++ PG  +  G+++    I    T  T T  + +T++  G+   R+    
Sbjct: 981  ETKTITYESSQVDPGTDLEPGVLMSAQTITSETTSTTTTTHITKTVKG-GISETRIE--- 1036

Query: 154  DEVATIAAEVTSFSNRFTHVLTAGGIGPTHDDVTFEAVAQAFGDELKPHPKL 205
                               ++  G     HD    +A+AQA  +  + HP +
Sbjct: 1037 -----------------KRIVITGDADIDHD----QALAQAIKEAKEQHPDM 1067


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,252,586
Number of Sequences: 37866
Number of extensions: 1161584
Number of successful extensions: 2865
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2862
Number of HSP's gapped (non-prelim): 9
length of query: 587
length of database: 18,247,518
effective HSP length: 108
effective length of query: 479
effective length of database: 14,157,990
effective search space: 6781677210
effective search space used: 6781677210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.