Guide to the Human Genome
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Name: CPOX Sequence: fasta or formatted (454aa) NCBI GI: 41393599
Description:

coproporphyrinogen oxidase

Referenced in:

Additional Cell Cycle Functions
Heme

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         35           3
 C cysteine            3.1         14           1
 D aspartate           4.6         21           2
 E glutamate           6.8         31           4
 F phenylalanine       4.4         20           2
 G glycine            11.5         52           4
 H histidine           3.1         14           1
 I isoleucine          2.6         12           1
 K lysine              4.8         22           2
 L leucine             8.6         39           2
 M methionine          2.0          9           1
 N asparagine          1.8          8           1
 P proline             5.7         26           2
 Q glutamine           4.0         18           2
 R arginine            7.9         36           3
 S serine              6.8         31           2
 T threonine           4.2         19           1
 V valine              5.9         27           2
 W tryptophan          2.4         11           2
 Y tyrosine            2.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coproporphyrinogen oxidase 
BHLHE22               0.016   basic helix-loop-helix domain containing, class B, 5...
MBD2                  0.013   methyl-CpG binding domain protein 2 testis-specific i...
MBD2                  0.013   methyl-CpG binding domain protein 2 isoform 1 
COL17A1               0.013   alpha 1 type XVII collagen 
LOC100293294          0.013   PREDICTED: hypothetical protein 
LOC100291943          0.012   PREDICTED: hypothetical protein XP_002344929 
LOC100290716          0.012   PREDICTED: hypothetical protein XP_002347730 
LOC100288794          0.012   PREDICTED: hypothetical protein XP_002343507 
FLJ31945              0.011   PREDICTED: hypothetical protein 
FLJ31945              0.011   PREDICTED: hypothetical protein 
LOC100289745          0.011   PREDICTED: hypothetical protein XP_002347086 
LOC100288749          0.011   PREDICTED: hypothetical protein XP_002342931 
ACBD4                 0.010   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.010   acyl-Coenzyme A binding domain containing 4 isoform...
LOC100292655          0.010   PREDICTED: similar to armadillo repeat containing, ...
LOC339192             0.009   PREDICTED: hypothetical protein 
LOC339192             0.009   PREDICTED: hypothetical protein 
LOC339192             0.009   PREDICTED: hypothetical protein 
LOC728046             0.008   PREDICTED: hypothetical protein 
LOC100292340          0.008   PREDICTED: hypothetical protein 
LOC100291090          0.008   PREDICTED: hypothetical protein XP_002346913 
LOC100288256          0.008   PREDICTED: hypothetical protein XP_002342743 
LOC100288256          0.008   PREDICTED: hypothetical protein 
KRT1                  0.008   keratin 1 
ENPP1                 0.008   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
MNX1                  0.008   homeo box HB9 
LBXCOR1               0.006   LBXCOR1 homolog 
EN1                   0.006   engrailed homeobox 1 
FLJ31945              0.006   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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