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Search of human proteins with 41393549
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41393549 nudix-type motif 10 [Homo sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41393549 nudix-type motif 10 [Homo sapiens] 343 3e-95
gi|37221177 nudix-type motif 11 [Homo sapiens] 340 3e-94
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] 310 5e-85
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] 303 4e-83
gi|5729804 nudix-type motif 3 [Homo sapiens] 246 6e-66
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] 50 1e-06
gi|37594461 nudix-type motif 6 isoform b [Homo sapiens] 49 3e-06
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 42 3e-04
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 39 0.002
gi|22219467 nudix-type motif 2 [Homo sapiens] 38 0.003
gi|22219465 nudix-type motif 2 [Homo sapiens] 38 0.003
gi|4502125 nudix-type motif 2 [Homo sapiens] 38 0.003
gi|31542498 DCP2 decapping enzyme [Homo sapiens] 35 0.022
gi|134254443 pecanex-like 2 [Homo sapiens] 32 0.19
gi|37594464 nudix-type motif 5 [Homo sapiens] 30 1.2
gi|21389589 transmembrane channel-like 4 isoform 2 [Homo sapiens] 28 2.7
gi|223718080 transmembrane channel-like 4 isoform 1 [Homo sapiens] 28 2.7
gi|9966787 solute carrier family 24 (sodium/potassium/calcium ex... 28 4.6
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 28 4.6
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 27 6.1
gi|13491172 periaxin isoform 1 [Homo sapiens] 27 6.1
gi|116686120 periaxin isoform 2 [Homo sapiens] 27 6.1
gi|118572603 ubinuclein 1 [Homo sapiens] 27 7.9
gi|118572601 ubinuclein 1 [Homo sapiens] 27 7.9
gi|21359965 CLPTM1-like [Homo sapiens] 27 7.9
gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho... 27 7.9
>gi|41393549 nudix-type motif 10 [Homo sapiens]
Length = 164
Score = 343 bits (881), Expect = 3e-95
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60
MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG
Sbjct: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60
Query: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120
AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF
Sbjct: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120
Query: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 164
KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 164
>gi|37221177 nudix-type motif 11 [Homo sapiens]
Length = 164
Score = 340 bits (872), Expect = 3e-94
Identities = 163/164 (99%), Positives = 163/164 (99%)
Query: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60
MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG
Sbjct: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60
Query: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120
AAVREVYEEAGVKGKLGRLLGVFEQNQD KHRTYVYVLTVTELLEDWEDSVSIGRKREWF
Sbjct: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120
Query: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 164
KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 164
>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
Length = 181
Score = 310 bits (793), Expect = 5e-85
Identities = 148/163 (90%), Positives = 155/163 (95%)
Query: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60
MK KPNQTRTYD EGFKKRAACLCFRSE+EDEVLLVSSSRYPD+WIVPGGGMEPEEEPGG
Sbjct: 2 MKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGG 61
Query: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120
AAVREVYEEAGVKGKLGRLLG+FEQNQD KHRTYVYVLTVTE+LEDWEDSV+IGRKREWF
Sbjct: 62 AAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF 121
Query: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSD 163
KVEDAIKVLQCHKPVHAEYLEKLKLG SP NGNS PS PD++
Sbjct: 122 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNN 164
>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
Length = 180
Score = 303 bits (776), Expect = 4e-83
Identities = 147/163 (90%), Positives = 154/163 (94%), Gaps = 1/163 (0%)
Query: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60
MK KPNQTRTYD EGFKKRAACLCFRSE+EDEVLLVSSSRYPD+WIVPGGGMEPEEEPGG
Sbjct: 2 MKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGG 61
Query: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120
AAVREVYEEAGVKGKLGRLLG+FE NQD KHRTYVYVLTVTE+LEDWEDSV+IGRKREWF
Sbjct: 62 AAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF 120
Query: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSD 163
KVEDAIKVLQCHKPVHAEYLEKLKLG SP NGNS PS PD++
Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNN 163
>gi|5729804 nudix-type motif 3 [Homo sapiens]
Length = 172
Score = 246 bits (628), Expect = 6e-66
Identities = 121/159 (76%), Positives = 135/159 (84%), Gaps = 1/159 (0%)
Query: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60
MK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PDRWIVPGGGMEPEEEP
Sbjct: 2 MKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSV 61
Query: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120
AAVREV EEAGVKG LGRL+G+FE NQ+ KHRTYVYVL VTE+LEDWEDSV+IGRKREWF
Sbjct: 62 AAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120
Query: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSS 159
K+EDAIKVLQ HKPV A Y E L+ G S NG + ++
Sbjct: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATT 159
>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
Length = 316
Score = 49.7 bits (117), Expect = 1e-06
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 28 EREDEVLLVSS-SRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQN 86
E ++L+V ++ + W PGG EPEE+ G AVREV+EE G+K + +L + +Q+
Sbjct: 153 ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH 212
Query: 87 QDP 89
+P
Sbjct: 213 TNP 215
>gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
Length = 147
Score = 48.5 bits (114), Expect = 3e-06
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 45 WIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDP 89
W PGG EPEE+ G AVREV+EE G+K + +L + +Q+ +P
Sbjct: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNP 46
>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
motif 18 [Homo sapiens]
Length = 323
Score = 41.6 bits (96), Expect = 3e-04
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 25 FRSEREDEVLLVSSSRYPDR--WIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGV 82
F SE +DEVLL+ ++ R W +P G MEP E A REV EEAG+ + LL V
Sbjct: 50 FLSE-QDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSV 108
Query: 83 FEQNQDPKHRTYVYVLTVT-ELLEDWEDSVSIGRKREWFKVEDAIKVLQCHKPVH 136
E+ P +V++ T +L+ +++ + + W+ L+ H +H
Sbjct: 109 EERG--PSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILH 161
>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
Length = 328
Score = 38.9 bits (89), Expect = 0.002
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 42 PDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRL----LGVFEQNQDPK------- 90
P+ W+ PGG +E EEE +RE++EE+G+ G+ LG++E P+
Sbjct: 119 PNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPK 178
Query: 91 -HRTYVYVLTVTE 102
H +Y+L +++
Sbjct: 179 YHHIVLYLLVISQ 191
>gi|22219467 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 38.1 bits (87), Expect = 0.003
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 32 EVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQD--- 88
E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F++ +
Sbjct: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
Query: 89 -PKHRTYVYVLTVTELLEDWEDSVSIGRKRE---WFKVEDAIKVLQ 130
K +T +Y L ++D++ + + + + W +E+A ++ Q
Sbjct: 85 RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127
>gi|22219465 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 38.1 bits (87), Expect = 0.003
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 32 EVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQD--- 88
E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F++ +
Sbjct: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
Query: 89 -PKHRTYVYVLTVTELLEDWEDSVSIGRKRE---WFKVEDAIKVLQ 130
K +T +Y L ++D++ + + + + W +E+A ++ Q
Sbjct: 85 RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127
>gi|4502125 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 38.1 bits (87), Expect = 0.003
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 32 EVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQD--- 88
E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F++ +
Sbjct: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
Query: 89 -PKHRTYVYVLTVTELLEDWEDSVSIGRKRE---WFKVEDAIKVLQ 130
K +T +Y L ++D++ + + + + W +E+A ++ Q
Sbjct: 85 RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127
>gi|31542498 DCP2 decapping enzyme [Homo sapiens]
Length = 420
Score = 35.4 bits (80), Expect = 0.022
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Query: 28 EREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAG--VKGKLGRLLGVFEQ 85
E + VLLV W P G + EE P A REV+EE G +K + + + +
Sbjct: 107 ETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELR 166
Query: 86 NQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWFKVEDAIKVLQCHKPVHAEYLEKLKL 145
D R Y+ + + + I R EWF +E L CH+ + K KL
Sbjct: 167 INDQLARLYIIPGIPKDTKFNPKTRREI-RNIEWFSIEK----LPCHR---NDMTPKSKL 218
Query: 146 GGSP 149
G +P
Sbjct: 219 GLAP 222
>gi|134254443 pecanex-like 2 [Homo sapiens]
Length = 2137
Score = 32.3 bits (72), Expect = 0.19
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 93 TYVYVLTVTELLEDWEDSVSIGRKREWFKVEDAIKVLQCHKPVHAE-YLEKLKLGGSPTN 151
T Y+ T +L W +++ R R WF + C+ H+ +E + GG+PT
Sbjct: 1835 TTSYLGTHRQLKNIWGGPITLDRIRTWFWTKWVRMRKDCNARQHSGGNIEDVDGGGAPTT 1894
Query: 152 GNSMAPS 158
G + APS
Sbjct: 1895 GGNNAPS 1901
>gi|37594464 nudix-type motif 5 [Homo sapiens]
Length = 219
Score = 29.6 bits (65), Expect = 1.2
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 48 PGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDW 107
P G ++ E P AA+RE+ EE G KG + + + T ++++TVT +D
Sbjct: 95 PAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCT-IHIVTVTINGDDA 153
Query: 108 EDS 110
E++
Sbjct: 154 ENA 156
>gi|21389589 transmembrane channel-like 4 isoform 2 [Homo sapiens]
Length = 706
Score = 28.5 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 31 DEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEE 69
+E+ ++ RY D ++P G +E EEE GG + R+ + E
Sbjct: 35 NELPSAATLRYRDPGVLPWGALEEEEEDGGRS-RKAFTE 72
>gi|223718080 transmembrane channel-like 4 isoform 1 [Homo
sapiens]
Length = 712
Score = 28.5 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 31 DEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEE 69
+E+ ++ RY D ++P G +E EEE GG + R+ + E
Sbjct: 41 NELPSAATLRYRDPGVLPWGALEEEEEDGGRS-RKAFTE 78
>gi|9966787 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 2 [Homo sapiens]
Length = 661
Score = 27.7 bits (60), Expect = 4.6
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 104 LEDWEDSVSIGRKREWFKVEDAIKVLQCHKPVH------AEYLEKLKLGGSPTNGNSMAP 157
L+ ++ GR RE + I +CH + A ++EK++L S + M P
Sbjct: 367 LKYYDTMTEEGRFREKASILHKIAKKKCHVDENERQNGAANHVEKIELPNSTSTDVEMTP 426
Query: 158 SSPDSDP 164
SS S+P
Sbjct: 427 SSDASEP 433
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 27.7 bits (60), Expect = 4.6
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 42 PDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRL 79
P I P G M P+ PG + EAG+KG LG L
Sbjct: 1136 PQGPIGPPGEMGPKGPPGAVGEPGLPGEAGMKGDLGPL 1173
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 27.3 bits (59), Expect = 6.1
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 53 EPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDPKH--RTYVYVLTVTEL------- 103
E EEE A E E++ V+G+ + E+++ P + +T ++ E
Sbjct: 318 EEEEEEEEAEEEEEEEDSEVQGEQPKPASPAEEDKMPPYDEQTQAFIDAAQEARNKFEEA 377
Query: 104 ---LEDWEDSVSIGRKREWFKV----EDAIKVLQCHKPVHAEYLEKL----------KLG 146
L+D E+S+ + F E A QC++ EY+ +L KLG
Sbjct: 378 ERSLKDMEESIRNLEQEISFDFGPNGEFAYLYSQCYELTTNEYVYRLCPFKLVSQKPKLG 437
Query: 147 GSPTN-GNSMAPSSPDSD 163
GSPT+ G + PD D
Sbjct: 438 GSPTSLGTWGSWIGPDHD 455
>gi|13491172 periaxin isoform 1 [Homo sapiens]
Length = 147
Score = 27.3 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 118 EWFKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSS 159
E FK EDA+++LQC +P + K + PT ++ P +
Sbjct: 73 ENFKYEDALRLLQCAEPYKVSFCLKRTV---PTGDLALRPGT 111
>gi|116686120 periaxin isoform 2 [Homo sapiens]
Length = 1461
Score = 27.3 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 118 EWFKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSS 159
E FK EDA+++LQC +P + K + PT ++ P +
Sbjct: 73 ENFKYEDALRLLQCAEPYKVSFCLKRTV---PTGDLALRPGT 111
>gi|118572603 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 26.9 bits (58), Expect = 7.9
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 15 GFKKRAACLCFR--SEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGV 72
GF + L FR SE ED+ + + P + + GG + +++ + E+
Sbjct: 159 GFYINSGTLQFRQASESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKKDDTYDK--EKKSK 216
Query: 73 KGKLGRL-LGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWFKVEDAIKVLQC 131
K K + +++ K + Y L+V E+L+ ++ +KRE +
Sbjct: 217 KSKFSKAGFTALNASKEKKKKKYSGALSVKEMLKKFQKEKEAQKKRE-----------EE 265
Query: 132 HKPV---HAEYLEKLKLGGSPTNGNSMAPSSPDSD 163
HKPV AE +L G+ S+ S+ D+D
Sbjct: 266 HKPVAVPSAEAQGLRELEGASDPLLSLFGSTSDND 300
>gi|118572601 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 26.9 bits (58), Expect = 7.9
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 15 GFKKRAACLCFR--SEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGV 72
GF + L FR SE ED+ + + P + + GG + +++ + E+
Sbjct: 159 GFYINSGTLQFRQASESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKKDDTYDK--EKKSK 216
Query: 73 KGKLGRL-LGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWFKVEDAIKVLQC 131
K K + +++ K + Y L+V E+L+ ++ +KRE +
Sbjct: 217 KSKFSKAGFTALNASKEKKKKKYSGALSVKEMLKKFQKEKEAQKKRE-----------EE 265
Query: 132 HKPV---HAEYLEKLKLGGSPTNGNSMAPSSPDSD 163
HKPV AE +L G+ S+ S+ D+D
Sbjct: 266 HKPVAVPSAEAQGLRELEGASDPLLSLFGSTSDND 300
>gi|21359965 CLPTM1-like [Homo sapiens]
Length = 538
Score = 26.9 bits (58), Expect = 7.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 109 DSVSIGRKREWFKVEDAIKVLQ 130
D VS+GR R W ++DA+ LQ
Sbjct: 242 DKVSLGRLRFWIHMQDAVYSLQ 263
>gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo
sapiens]
Length = 1781
Score = 26.9 bits (58), Expect = 7.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 37 SSSRYPDRWIVPGGGMEPEEEP 58
SSS DRW P +EPE++P
Sbjct: 1279 SSSHSDDRWFDPLDPLEPEQDP 1300
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,677,289
Number of Sequences: 37866
Number of extensions: 359708
Number of successful extensions: 722
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 701
Number of HSP's gapped (non-prelim): 26
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.