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Search of human proteins with 40805862
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens]
(186 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens] 360 e-100
gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens] 351 2e-97
gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens] 348 1e-96
gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens] 347 3e-96
gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens] 339 9e-94
gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens] 335 1e-92
gi|4827038 tumor protein D52 isoform 3 [Homo sapiens] 171 3e-43
gi|70608172 tumor protein D52 isoform 1 [Homo sapiens] 171 3e-43
gi|70608174 tumor protein D52 isoform 2 [Homo sapiens] 160 5e-40
gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens] 152 2e-37
gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens] 152 2e-37
gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens] 145 3e-35
gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens] 135 3e-32
gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens] 133 8e-32
gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens] 131 4e-31
gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens] 131 4e-31
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 39 0.003
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 39 0.003
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 39 0.003
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 39 0.003
gi|33636719 translocase of inner mitochondrial membrane 44 [Homo... 37 0.013
gi|62821790 leucine zipper protein 2 [Homo sapiens] 34 0.083
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 33 0.11
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens] 33 0.14
gi|28195384 neuronal pentraxin II [Homo sapiens] 33 0.18
gi|55770878 neuronal pentraxin I precursor [Homo sapiens] 32 0.24
gi|58535453 CDK5 regulatory subunit associated protein 2 isoform... 32 0.41
gi|58535451 CDK5 regulatory subunit associated protein 2 isoform... 32 0.41
gi|4505257 moesin [Homo sapiens] 32 0.41
gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens] 32 0.41
>gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens]
Length = 186
Score = 360 bits (925), Expect = e-100
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT 120
Query: 121 SAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPL 180
SAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPL
Sbjct: 121 SAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPL 180
Query: 181 SDPAPF 186
SDPAPF
Sbjct: 181 SDPAPF 186
>gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens]
Length = 200
Score = 351 bits (900), Expect = 2e-97
Identities = 186/200 (93%), Positives = 186/200 (93%), Gaps = 14/200 (7%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT 120
Query: 121 SAALSTVGSAISRKLGD--------------MRNSATFKSFEDRVGTIKSKVVGDRENGS 166
SAALSTVGSAISRKLGD MRNSATFKSFEDRVGTIKSKVVGDRENGS
Sbjct: 121 SAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVVGDRENGS 180
Query: 167 DNLPSSAGSGDKPLSDPAPF 186
DNLPSSAGSGDKPLSDPAPF
Sbjct: 181 DNLPSSAGSGDKPLSDPAPF 200
>gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens]
Length = 206
Score = 348 bits (894), Expect = 1e-96
Identities = 186/206 (90%), Positives = 186/206 (90%), Gaps = 20/206 (9%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 160
YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG 180
Query: 161 DRENGSDNLPSSAGSGDKPLSDPAPF 186
DRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 DRENGSDNLPSSAGSGDKPLSDPAPF 206
>gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens]
Length = 209
Score = 347 bits (891), Expect = 3e-96
Identities = 186/209 (88%), Positives = 186/209 (88%), Gaps = 23/209 (11%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKT 120
Query: 121 SAALSTVGSAISRKLGD-----------------------MRNSATFKSFEDRVGTIKSK 157
SAALSTVGSAISRKLGD MRNSATFKSFEDRVGTIKSK
Sbjct: 121 SAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSK 180
Query: 158 VVGDRENGSDNLPSSAGSGDKPLSDPAPF 186
VVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 VVGDRENGSDNLPSSAGSGDKPLSDPAPF 209
>gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens]
Length = 220
Score = 339 bits (869), Expect = 9e-94
Identities = 186/220 (84%), Positives = 186/220 (84%), Gaps = 34/220 (15%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGD--------------MRNSATFKS 146
YKKTQETLSQAGQKTSAALSTVGSAISRKLGD MRNSATFKS
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS 180
Query: 147 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 186
FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
>gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens]
Length = 229
Score = 335 bits (860), Expect = 1e-92
Identities = 186/229 (81%), Positives = 186/229 (81%), Gaps = 43/229 (18%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGD----------------------- 137
YKKTQETLSQAGQKTSAALSTVGSAISRKLGD
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
Query: 138 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 186
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
>gi|4827038 tumor protein D52 isoform 3 [Homo sapiens]
Length = 184
Score = 171 bits (433), Expect = 3e-43
Identities = 90/157 (57%), Positives = 116/157 (73%), Gaps = 2/157 (1%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 21 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 80
Query: 91 QNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDR 150
QN+++ W DV +SAYKKT ETLSQAGQK SAA S+VGS I++KL D++NS TFKSFE++
Sbjct: 81 QNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEK 140
Query: 151 VGTIKSKVVGDRENGSD--NLPSSAGSGDKPLSDPAP 185
V +KSKV G + G D + +SA + ++P P
Sbjct: 141 VENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLP 177
>gi|70608172 tumor protein D52 isoform 1 [Homo sapiens]
Length = 224
Score = 171 bits (433), Expect = 3e-43
Identities = 90/157 (57%), Positives = 116/157 (73%), Gaps = 2/157 (1%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 61 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 120
Query: 91 QNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDR 150
QN+++ W DV +SAYKKT ETLSQAGQK SAA S+VGS I++KL D++NS TFKSFE++
Sbjct: 121 QNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEK 180
Query: 151 VGTIKSKVVGDRENGSD--NLPSSAGSGDKPLSDPAP 185
V +KSKV G + G D + +SA + ++P P
Sbjct: 181 VENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLP 217
>gi|70608174 tumor protein D52 isoform 2 [Homo sapiens]
Length = 207
Score = 160 bits (406), Expect = 5e-40
Identities = 92/180 (51%), Positives = 116/180 (64%), Gaps = 25/180 (13%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 21 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 80
Query: 91 QNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGD------------- 137
QN+++ W DV +SAYKKT ETLSQAGQK SAA S+VGS I++KL D
Sbjct: 81 QNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHSFSIR 140
Query: 138 ----------MRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAGSGDKPLSDPAP 185
MRNS TFKSFE++V +KSKV G + G D + +SA + ++P P
Sbjct: 141 SIQHSISMPAMRNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLP 200
>gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens]
Length = 175
Score = 152 bits (384), Expect = 2e-37
Identities = 81/142 (57%), Positives = 104/142 (73%), Gaps = 17/142 (11%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 2 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 61
Query: 101 QVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGD-------------MRNSATFKSF 147
Q ++AYKKT ETLS AGQK +AA S VG+AIS+K GD MRNS TFKSF
Sbjct: 62 QTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSYSIRHSISMPAMRNSPTFKSF 121
Query: 148 EDRVGT----IKSKVVGDRENG 165
E+RV T +K+KV G NG
Sbjct: 122 EERVETTVTSLKTKVGGTNPNG 143
>gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens]
Length = 204
Score = 152 bits (384), Expect = 2e-37
Identities = 81/142 (57%), Positives = 104/142 (73%), Gaps = 17/142 (11%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGD-------------MRNSATFKSF 147
Q ++AYKKT ETLS AGQK +AA S VG+AIS+K GD MRNS TFKSF
Sbjct: 91 QTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSYSIRHSISMPAMRNSPTFKSF 150
Query: 148 EDRVGT----IKSKVVGDRENG 165
E+RV T +K+KV G NG
Sbjct: 151 EERVETTVTSLKTKVGGTNPNG 172
>gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens]
Length = 140
Score = 145 bits (365), Expect = 3e-35
Identities = 81/140 (57%), Positives = 100/140 (71%), Gaps = 9/140 (6%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSA 142
L+ L L+QNLS+SW DVQVS+ Y K QKTSAALST+G+ I RKLG ++ SA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKSA 116
Query: 143 TFKSFEDRVGTIKSKVVGDR 162
T +SFE +GTIKSKV G +
Sbjct: 117 TLRSFEGLMGTIKSKVSGGK 136
>gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens]
Length = 131
Score = 135 bits (339), Expect = 3e-32
Identities = 64/99 (64%), Positives = 84/99 (84%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMR 139
Q ++AYKKT ETLS AGQK +AA S VG+AIS+K GDMR
Sbjct: 91 QTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMR 129
>gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens]
Length = 144
Score = 133 bits (335), Expect = 8e-32
Identities = 64/101 (63%), Positives = 84/101 (83%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNS 141
Q ++AYKKT ETLS AGQK +AA S VG+AIS+K GDM S
Sbjct: 91 QTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSYS 131
>gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens]
Length = 132
Score = 131 bits (329), Expect = 4e-31
Identities = 73/126 (57%), Positives = 90/126 (71%), Gaps = 9/126 (7%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSA 142
L+ L L+QNLS+SW DVQVS+ Y K QKTSAALST+G+ I RKLG ++ SA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKSA 116
Query: 143 TFKSFE 148
T +SFE
Sbjct: 117 TLRSFE 122
>gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens]
Length = 136
Score = 131 bits (329), Expect = 4e-31
Identities = 73/126 (57%), Positives = 90/126 (71%), Gaps = 9/126 (7%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSA 142
L+ L L+QNLS+SW DVQVS+ Y K QKTSAALST+G+ I RKLG ++ SA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKSA 116
Query: 143 TFKSFE 148
T +SFE
Sbjct: 117 TLRSFE 122
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 38.5 bits (88), Expect = 0.003
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 14/161 (8%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 38 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 97
Query: 61 VTLRQVLAAKERHCGEL-KRRLGLSTLGELKQNLSRSWHDVQ--VSSAYKKTQETLSQAG 117
TLR A + EL K ++ L + E K + D+Q + A K+ +E L
Sbjct: 98 ETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKE 157
Query: 118 QKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKV 158
+ T + L +S + V +K +V
Sbjct: 158 RYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERV 198
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 38.5 bits (88), Expect = 0.003
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 14/161 (8%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 152 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 211
Query: 61 VTLRQVLAAKERHCGEL-KRRLGLSTLGELKQNLSRSWHDVQ--VSSAYKKTQETLSQAG 117
TLR A + EL K ++ L + E K + D+Q + A K+ +E L
Sbjct: 212 ETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKE 271
Query: 118 QKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKV 158
+ T + L +S + V +K +V
Sbjct: 272 RYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERV 312
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 38.5 bits (88), Expect = 0.003
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 14/161 (8%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 38 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 97
Query: 61 VTLRQVLAAKERHCGEL-KRRLGLSTLGELKQNLSRSWHDVQ--VSSAYKKTQETLSQAG 117
TLR A + EL K ++ L + E K + D+Q + A K+ +E L
Sbjct: 98 ETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKE 157
Query: 118 QKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKV 158
+ T + L +S + V +K +V
Sbjct: 158 RYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERV 198
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 38.5 bits (88), Expect = 0.003
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 14/161 (8%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 172 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 231
Query: 61 VTLRQVLAAKERHCGEL-KRRLGLSTLGELKQNLSRSWHDVQ--VSSAYKKTQETLSQAG 117
TLR A + EL K ++ L + E K + D+Q + A K+ +E L
Sbjct: 232 ETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKE 291
Query: 118 QKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKV 158
+ T + L +S + V +K +V
Sbjct: 292 RYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERV 332
>gi|33636719 translocase of inner mitochondrial membrane 44 [Homo
sapiens]
Length = 452
Score = 36.6 bits (83), Expect = 0.013
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 15 KGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHC 74
KG LS + +V + +A E + + +E R E + V +E + + ++
Sbjct: 57 KGFLSGLLDNVKQE--LAKNKEMKESIKKFRDEARRLEESDVLQEARRKYKTIESETVRT 114
Query: 75 GELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRK 134
E+ R+ LGEL + S H+V S +K +E + +A + + +V K
Sbjct: 115 SEVLRK----KLGELTGTVKESLHEVSKSDLGRKIKEGVEEAAKTAKQSAESVSKG-GEK 169
Query: 135 LGDMRNSATFKSFEDRVGTIKSKV 158
LG +A F++ V ++K ++
Sbjct: 170 LG---RTAAFRALSQGVESVKKEI 190
>gi|62821790 leucine zipper protein 2 [Homo sapiens]
Length = 346
Score = 33.9 bits (76), Expect = 0.083
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 36 PAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSR 95
PA+ T + EEL +L +V +E T+ + L R L +K NL
Sbjct: 14 PALVLSTRQDYEELEKQLKEVFKERSTILRQLTKTSRE------------LDGIKVNLQS 61
Query: 96 SWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM-----RNSATFKSFEDR 150
+D Q + K + L + GQK + ++ A+ +L + ++ AT +
Sbjct: 62 LKNDEQ---SAKTDVQKLLELGQKQREEMKSLQEALQNQLKETSEKAEKHQATINFLKTE 118
Query: 151 VGTIKSKVVGDRENGSDNLPSSAGSGDK 178
V KSK++ D +N + +L + SG+K
Sbjct: 119 VER-KSKMIRDLQNENKSLKNKLLSGNK 145
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 33.5 bits (75), Expect = 0.11
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 29 TGVAARTPAVEGLTEAEE---EELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLST 85
T +AA T ++ L + + +E + K + I + + + KE +C LK +L +
Sbjct: 2185 TQLAAFTKSMSSLQDDRDRVIDEAKKWERKFSDAIQSKEEEIRLKEDNCSVLKDQLRQMS 2244
Query: 86 LG--ELKQNLSRSWHDVQVSSAYKKTQETLSQ 115
+ ELK N+SR HD Q+ + +T+ L Q
Sbjct: 2245 IHMEELKINISRLEHDKQIWESKAQTEVQLQQ 2276
>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
Length = 1498
Score = 33.1 bits (74), Expect = 0.14
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 45 EEEELRAELTKVEEEIVTLRQVLAAKERHC-GELKRRLGLST-LGELKQNLSRSWHDVQV 102
E+ AEL+++ E+ +RQ +A E H K R + T L L+ + + +
Sbjct: 893 EKRTAEAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEA 952
Query: 103 SSAYKKTQETLSQAGQKT----SAALSTVGSAISRKLGDMRNSATFKSFEDRVG------ 152
+ A KK E L Q +K + +GS ++ +M+ K++E+ VG
Sbjct: 953 NEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTK--HKAYENAVGILSRRL 1010
Query: 153 --TIKSKVVGDRENGSDNLPSSAGSGDKPLS 181
+ +K D E G L + GS D L+
Sbjct: 1011 QEALAAKEAADAELG--QLRAQGGSSDSSLA 1039
>gi|28195384 neuronal pentraxin II [Homo sapiens]
Length = 431
Score = 32.7 bits (73), Expect = 0.18
Identities = 36/184 (19%), Positives = 72/184 (39%), Gaps = 29/184 (15%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKE 71
+P + ++ V G ++G ++ EEELRA + ++ E +V ++ L A+
Sbjct: 22 APGSRFVCTALPPEAVHAGCPLPAMPMQGGAQSPEEELRAAVLQLRETVVQQKETLGAQR 81
Query: 72 RHCGELKRRL-----------------GLSTLGELKQNLSRSWHDV-QVSSAYKKTQETL 113
EL +L G T+G+L ++ H V Q+S + + ++ L
Sbjct: 82 EAIRELTGKLARCEGLAGGKARGAGATGKDTMGDLPRD---PGHVVEQLSRSLQTLKDRL 138
Query: 114 SQAGQKTSAALSTVG------SAISRKLGDMRNSATFK--SFEDRVGTIKSKVVGDRENG 165
+ A +S G + ++LG++ K ED + ++ R+
Sbjct: 139 ESLEHQLRANVSNAGLPGDFREVLQQRLGELERQLLRKVAELEDEKSLLHNETSAHRQKT 198
Query: 166 SDNL 169
L
Sbjct: 199 ESTL 202
>gi|55770878 neuronal pentraxin I precursor [Homo sapiens]
Length = 432
Score = 32.3 bits (72), Expect = 0.24
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T VPVD + A + A G EELR+ + ++ E ++ ++ + +++ EL +LG
Sbjct: 33 TSVPVDADMCAASVAAGGA-----EELRSSVLQLRETVLQQKETILSQKETIRELTAKLG 87
Query: 83 ----LSTL----GELKQNLSR----SWHDVQVSSAYKKTQETLSQAGQ 118
STL GE + R S + + ETLSQ GQ
Sbjct: 88 RCESQSTLDPGAGEARAGGGRKQPGSGKNTMGDLSRTPAAETLSQLGQ 135
>gi|58535453 CDK5 regulatory subunit associated protein 2 isoform b
[Homo sapiens]
Length = 1814
Score = 31.6 bits (70), Expect = 0.41
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 13/141 (9%)
Query: 32 AARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQ 91
AA E TEA + E + E EE I L + L KER K+ LK+
Sbjct: 264 AAPREEKERETEAAQMEHQKERNSFEERIQALEEDLREKEREIATEKK-------NSLKR 316
Query: 92 NLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRV 151
+ + + + S KK +E S+ +K SAA + A+ + + F+ ED
Sbjct: 317 DKAIQGLTMALKSKEKKVEELNSEI-EKLSAAFAKAREALQK-----AQTQEFQGSEDYE 370
Query: 152 GTIKSKVVGDRENGSDNLPSS 172
+ K S NL S
Sbjct: 371 TALSGKEALSAALRSQNLTKS 391
>gi|58535451 CDK5 regulatory subunit associated protein 2 isoform a
[Homo sapiens]
Length = 1893
Score = 31.6 bits (70), Expect = 0.41
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 13/141 (9%)
Query: 32 AARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQ 91
AA E TEA + E + E EE I L + L KER K+ LK+
Sbjct: 264 AAPREEKERETEAAQMEHQKERNSFEERIQALEEDLREKEREIATEKK-------NSLKR 316
Query: 92 NLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRV 151
+ + + + S KK +E S+ +K SAA + A+ + + F+ ED
Sbjct: 317 DKAIQGLTMALKSKEKKVEELNSEI-EKLSAAFAKAREALQK-----AQTQEFQGSEDYE 370
Query: 152 GTIKSKVVGDRENGSDNLPSS 172
+ K S NL S
Sbjct: 371 TALSGKEALSAALRSQNLTKS 391
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 31.6 bits (70), Expect = 0.41
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 43 EAEEEELRAELTKVEEEIVTLRQVLAAKERHCGEL--KRRLGLSTLGELKQNLSRSWHD- 99
E E+EEL L ++EE+ +Q L + R EL +R+ S +L + +
Sbjct: 341 EREKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKLAKERQEAEEAK 400
Query: 100 ---VQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRK 134
+Q S KKTQE L+ + +A +S + A +K
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKK 438
>gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens]
Length = 498
Score = 31.6 bits (70), Expect = 0.41
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 2 DSAGQDINLNSPNKGLLSDS-MTDVPVDTGVA-----ARTPAVEGLTEAEEEELRAELTK 55
+S I++N L SD+ TD+P T VA +T A++G++E E+ +++ +
Sbjct: 398 ESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLE 457
Query: 56 VEEE 59
V+E+
Sbjct: 458 VDED 461
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.124 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,421,174
Number of Sequences: 37866
Number of extensions: 255215
Number of successful extensions: 1466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 1366
Number of HSP's gapped (non-prelim): 168
length of query: 186
length of database: 18,247,518
effective HSP length: 96
effective length of query: 90
effective length of database: 14,612,382
effective search space: 1315114380
effective search space used: 1315114380
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.