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Search of human proteins with 40068047
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40068047 cyclin M3 isoform 2 [Homo sapiens]
(659 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40068047 cyclin M3 isoform 2 [Homo sapiens] 1292 0.0
gi|40068049 cyclin M3 isoform 1 [Homo sapiens] 1269 0.0
gi|40068055 cyclin M2 isoform 2 [Homo sapiens] 432 e-121
gi|40068053 cyclin M2 isoform 1 [Homo sapiens] 427 e-119
gi|157412263 cyclin M1 [Homo sapiens] 416 e-116
gi|94681046 cyclin M4 [Homo sapiens] 408 e-113
gi|40068051 cyclin M2 isoform 3 [Homo sapiens] 249 4e-66
gi|4504079 glycosylphosphatidylinositol anchor attachment protei... 36 0.13
gi|222418604 hypothetical protein LOC257407 [Homo sapiens] 35 0.17
gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo ... 35 0.29
gi|169168886 PREDICTED: hypothetical protein [Homo sapiens] 35 0.29
gi|56090582 immunity-related GTPase family, Q [Homo sapiens] 34 0.38
gi|34304360 nephrocystin 3 [Homo sapiens] 33 0.84
gi|207452735 epiplakin 1 [Homo sapiens] 33 1.1
gi|71164871 CUG triplet repeat, RNA-binding protein 1 isoform 3 ... 33 1.1
gi|5729794 CUG triplet repeat, RNA-binding protein 1 isoform 1 [... 33 1.1
gi|216548145 RNA pseudouridylate synthase domain containing 3 is... 33 1.1
gi|12232395 lipid phosphate phosphatase-related protein type 2 [... 33 1.1
gi|4758392 forkhead box D1 [Homo sapiens] 33 1.1
gi|40255047 pleckstrin homology domain containing, family H (wit... 33 1.1
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 32 1.4
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 32 1.4
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 32 1.4
gi|239756433 PREDICTED: hypothetical protein [Homo sapiens] 32 1.9
gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo ... 32 1.9
gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo ... 32 1.9
gi|157743252 pecanex-like 3 [Homo sapiens] 32 1.9
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo... 32 1.9
gi|157042792 coiled-coil domain containing 64B [Homo sapiens] 32 1.9
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 32 2.4
>gi|40068047 cyclin M3 isoform 2 [Homo sapiens]
Length = 659
Score = 1292 bits (3343), Expect = 0.0
Identities = 659/659 (100%), Positives = 659/659 (100%)
Query: 1 MAAAVAAAGRLGWLFAALCLGNAAGEAAPGPRVLGFCLEEDGAAGAGWVRGGAARDTPDA 60
MAAAVAAAGRLGWLFAALCLGNAAGEAAPGPRVLGFCLEEDGAAGAGWVRGGAARDTPDA
Sbjct: 1 MAAAVAAAGRLGWLFAALCLGNAAGEAAPGPRVLGFCLEEDGAAGAGWVRGGAARDTPDA 60
Query: 61 TFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVR 120
TFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVR
Sbjct: 61 TFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVR 120
Query: 121 VEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAA 180
VEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAA
Sbjct: 121 VEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAA 180
Query: 181 ARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVP 240
ARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVP
Sbjct: 181 ARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVP 240
Query: 241 AAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVLELARGGGDP 300
AAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVLELARGGGDP
Sbjct: 241 AAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVLELARGGGDP 300
Query: 301 YSDLSKGVLRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNIV 360
YSDLSKGVLRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNIV
Sbjct: 301 YSDLSKGVLRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNIV 360
Query: 361 DMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGDTVVKRKPASL 420
DMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGDTVVKRKPASL
Sbjct: 361 DMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGDTVVKRKPASL 420
Query: 421 MAPLKRKEEFSLFKVSDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLKHP 480
MAPLKRKEEFSLFKVSDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLKHP
Sbjct: 421 MAPLKRKEEFSLFKVSDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLKHP 480
Query: 481 SVNQEVRFDESNRLATHHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYGVS 540
SVNQEVRFDESNRLATHHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYGVS
Sbjct: 481 SVNQEVRFDESNRLATHHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYGVS 540
Query: 541 ALTVPSSVHQSPVSSLQPIRHDLQPDPGDGTHSSAYCPDYTVRALSDLQLIKVTRLQYLN 600
ALTVPSSVHQSPVSSLQPIRHDLQPDPGDGTHSSAYCPDYTVRALSDLQLIKVTRLQYLN
Sbjct: 541 ALTVPSSVHQSPVSSLQPIRHDLQPDPGDGTHSSAYCPDYTVRALSDLQLIKVTRLQYLN 600
Query: 601 ALLATRAQNLPQSPENTDLQVIPGSQTRLLGEKTTTAAGSSHSRPGVPVEGSPGRNPGV 659
ALLATRAQNLPQSPENTDLQVIPGSQTRLLGEKTTTAAGSSHSRPGVPVEGSPGRNPGV
Sbjct: 601 ALLATRAQNLPQSPENTDLQVIPGSQTRLLGEKTTTAAGSSHSRPGVPVEGSPGRNPGV 659
>gi|40068049 cyclin M3 isoform 1 [Homo sapiens]
Length = 707
Score = 1269 bits (3284), Expect = 0.0
Identities = 659/707 (93%), Positives = 659/707 (93%), Gaps = 48/707 (6%)
Query: 1 MAAAVAAAGRLGWLFAALCLGNAAGEAAPGPRVLGFCLEEDGAAGAGWVRGGAARDTPDA 60
MAAAVAAAGRLGWLFAALCLGNAAGEAAPGPRVLGFCLEEDGAAGAGWVRGGAARDTPDA
Sbjct: 1 MAAAVAAAGRLGWLFAALCLGNAAGEAAPGPRVLGFCLEEDGAAGAGWVRGGAARDTPDA 60
Query: 61 TFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVR 120
TFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVR
Sbjct: 61 TFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVR 120
Query: 121 VEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAA 180
VEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAA
Sbjct: 121 VEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAA 180
Query: 181 ARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVP 240
ARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVP
Sbjct: 181 ARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVP 240
Query: 241 AAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVLELARGGGDP 300
AAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVLELARGGGDP
Sbjct: 241 AAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVLELARGGGDP 300
Query: 301 YSDLSKGVLRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNIV 360
YSDLSKGVLRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNIV
Sbjct: 301 YSDLSKGVLRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNIV 360
Query: 361 DMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRG----------- 409
DMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRG
Sbjct: 361 DMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGKSHLAIVQKVN 420
Query: 410 -------------------------------------DTVVKRKPASLMAPLKRKEEFSL 432
DTVVKRKPASLMAPLKRKEEFSL
Sbjct: 421 NEGEGDPFYEVLGLVTLEDVIEEIIRSEILDESEDYRDTVVKRKPASLMAPLKRKEEFSL 480
Query: 433 FKVSDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLKHPSVNQEVRFDESN 492
FKVSDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLKHPSVNQEVRFDESN
Sbjct: 481 FKVSDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLKHPSVNQEVRFDESN 540
Query: 493 RLATHHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYGVSALTVPSSVHQSP 552
RLATHHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYGVSALTVPSSVHQSP
Sbjct: 541 RLATHHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYGVSALTVPSSVHQSP 600
Query: 553 VSSLQPIRHDLQPDPGDGTHSSAYCPDYTVRALSDLQLIKVTRLQYLNALLATRAQNLPQ 612
VSSLQPIRHDLQPDPGDGTHSSAYCPDYTVRALSDLQLIKVTRLQYLNALLATRAQNLPQ
Sbjct: 601 VSSLQPIRHDLQPDPGDGTHSSAYCPDYTVRALSDLQLIKVTRLQYLNALLATRAQNLPQ 660
Query: 613 SPENTDLQVIPGSQTRLLGEKTTTAAGSSHSRPGVPVEGSPGRNPGV 659
SPENTDLQVIPGSQTRLLGEKTTTAAGSSHSRPGVPVEGSPGRNPGV
Sbjct: 661 SPENTDLQVIPGSQTRLLGEKTTTAAGSSHSRPGVPVEGSPGRNPGV 707
>gi|40068055 cyclin M2 isoform 2 [Homo sapiens]
Length = 853
Score = 432 bits (1110), Expect = e-121
Identities = 256/595 (43%), Positives = 350/595 (58%), Gaps = 86/595 (14%)
Query: 133 PPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAAARRLEPARRWAG 192
P W + + LL L+ + GL L +AL P E+++++ G+E E+ A+R+EP RR
Sbjct: 254 PFWLQVIFISLLLCLSGMFSGLNLGLMALDPMELRIVQNCGTEKEKNYAKRIEPVRRQGN 313
Query: 193 CALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVPAAVSGRWTLALA 252
L +LLL L L +LL AG V V+ + G+V + GE+VP A+ R LA+
Sbjct: 314 YLLCSLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIV-IFGEIVPQAICSRHGLAVG 372
Query: 253 PRALGLSRLAVLLTLPVALPVGQLLE--LAARPGRL--RERVLELARGGGDPYSDLSKGV 308
+ L++ +++T P + PV +LL+ L G + RE++LE+ R DPY+DL K
Sbjct: 373 ANTIFLTKFFMMMTFPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRVT-DPYNDLVKEE 431
Query: 309 L---------RCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNI 359
L R +TVEDV+TPL DCFM+ +LDF ++ IM+SG+TRIPV+E ERSNI
Sbjct: 432 LNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNI 491
Query: 360 VDMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRG---------- 409
VD+L++KDLAFVDP+DCTPL TIT+FYNHPLHFVFNDTKLDA+LEEFK+G
Sbjct: 492 VDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRV 551
Query: 410 ----------------------------------DTVVKRKPASLMAPLKRKEEFSLFKV 435
D + +A +RK++FS FK
Sbjct: 552 NNEGEGDPFYEVLGIVTLEDVIEEIIKSEILDETDLYTDNRTKKKVAHRERKQDFSAFKQ 611
Query: 436 SDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLKHPSVNQEVRFDESNRLA 495
+D E KV ISPQLLLA RFL+ EV+ FSP ++SEK+LL LLKHP+V QE+++DE N+ A
Sbjct: 612 TDSEMKVKISPQLLLAMHRFLATEVEAFSPSQMSEKILLRLLKHPNVIQELKYDEKNKKA 671
Query: 496 THHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYGVSALTVPSSVHQSPVSS 555
+YLYQR++PVDYF+LILQG+VEVE GKEG+KFE AF+YYGV ALT ++SP
Sbjct: 672 PEYYLYQRNKPVDYFVLILQGKVEVEAGKEGMKFEASAFSYYGVMALTASPGENKSPPRP 731
Query: 556 LQPIRHD----------LQPDPGDGTHS------SAYCPDYTVRALSDLQLIKVTRLQYL 599
D + P G + Y PDY+VRALSDLQ +K++R QY
Sbjct: 732 CGLNHSDSLSRSDRIDAVTPTLGSSNNQLNSSLLQVYIPDYSVRALSDLQFVKISRQQYQ 791
Query: 600 NALLATRAQNLPQS--PENTDLQV--------IPGSQTRLLGEKT-TTAAGSSHS 643
NAL+A+R PQS ENT +++ +P LL E+ T + ++HS
Sbjct: 792 NALMASRMDKTPQSSDSENTKIELTLTELHDGLPDETANLLNEQNCVTHSKANHS 846
Score = 37.4 bits (85), Expect = 0.044
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 6 AAAGRLGWLFAALCLGNAAGEAAPGPR----VLGFCLEEDGAAGAGWVRGGAARDTPDAT 61
AAAGRL L C A G AA G ++G LE+ ++ GGA R +
Sbjct: 43 AAAGRLLPLLLLSCCCGAGGCAAVGENEETVIIGLRLEDTN--DVSFMEGGALRVSERTR 100
Query: 62 FLLRLFGPGFANSSWSWVA 80
LR++G N +WS +A
Sbjct: 101 VKLRVYGQNINNETWSRIA 119
>gi|40068053 cyclin M2 isoform 1 [Homo sapiens]
Length = 875
Score = 427 bits (1098), Expect = e-119
Identities = 261/617 (42%), Positives = 356/617 (57%), Gaps = 108/617 (17%)
Query: 133 PPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAAARRLEPARRWAG 192
P W + + LL L+ + GL L +AL P E+++++ G+E E+ A+R+EP RR
Sbjct: 254 PFWLQVIFISLLLCLSGMFSGLNLGLMALDPMELRIVQNCGTEKEKNYAKRIEPVRRQGN 313
Query: 193 CALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVPAAVSGRWTLALA 252
L +LLL L L +LL AG V V+ + G+V + GE+VP A+ R LA+
Sbjct: 314 YLLCSLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIV-IFGEIVPQAICSRHGLAVG 372
Query: 253 PRALGLSRLAVLLTLPVALPVGQLLE--LAARPGRL--RERVLELARGGGDPYSDLSKGV 308
+ L++ +++T P + PV +LL+ L G + RE++LE+ R DPY+DL K
Sbjct: 373 ANTIFLTKFFMMMTFPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRVT-DPYNDLVKEE 431
Query: 309 L---------RCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNI 359
L R +TVEDV+TPL DCFM+ +LDF ++ IM+SG+TRIPV+E ERSNI
Sbjct: 432 LNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNI 491
Query: 360 VDMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRG---------- 409
VD+L++KDLAFVDP+DCTPL TIT+FYNHPLHFVFNDTKLDA+LEEFK+G
Sbjct: 492 VDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRV 551
Query: 410 ----------------------------------DTVVKRKPASLMAPLKRKEEFSLFKV 435
D + +A +RK++FS FK
Sbjct: 552 NNEGEGDPFYEVLGIVTLEDVIEEIIKSEILDETDLYTDNRTKKKVAHRERKQDFSAFKQ 611
Query: 436 SDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLKHPSVNQEVRFDESNRLA 495
+D E KV ISPQLLLA RFL+ EV+ FSP ++SEK+LL LLKHP+V QE+++DE N+ A
Sbjct: 612 TDSEMKVKISPQLLLAMHRFLATEVEAFSPSQMSEKILLRLLKHPNVIQELKYDEKNKKA 671
Query: 496 THHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYGVSALT---VPSSVHQSP 552
+YLYQR++PVDYF+LILQG+VEVE GKEG+KFE AF+YYGV ALT VP S+ ++
Sbjct: 672 PEYYLYQRNKPVDYFVLILQGKVEVEAGKEGMKFEASAFSYYGVMALTASPVPLSLSRTF 731
Query: 553 VSSL-------QPIRHDLQPDPGDGTHSSA----------------------------YC 577
V S P + P P HS + Y
Sbjct: 732 VVSRTELLAAGSPGENKSPPRPCGLNHSDSLSRSDRIDAVTPTLGSSNNQLNSSLLQVYI 791
Query: 578 PDYTVRALSDLQLIKVTRLQYLNALLATRAQNLPQS--PENTDLQV--------IPGSQT 627
PDY+VRALSDLQ +K++R QY NAL+A+R PQS ENT +++ +P
Sbjct: 792 PDYSVRALSDLQFVKISRQQYQNALMASRMDKTPQSSDSENTKIELTLTELHDGLPDETA 851
Query: 628 RLLGEKT-TTAAGSSHS 643
LL E+ T + ++HS
Sbjct: 852 NLLNEQNCVTHSKANHS 868
Score = 37.4 bits (85), Expect = 0.044
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 6 AAAGRLGWLFAALCLGNAAGEAAPGPR----VLGFCLEEDGAAGAGWVRGGAARDTPDAT 61
AAAGRL L C A G AA G ++G LE+ ++ GGA R +
Sbjct: 43 AAAGRLLPLLLLSCCCGAGGCAAVGENEETVIIGLRLEDTN--DVSFMEGGALRVSERTR 100
Query: 62 FLLRLFGPGFANSSWSWVA 80
LR++G N +WS +A
Sbjct: 101 VKLRVYGQNINNETWSRIA 119
>gi|157412263 cyclin M1 [Homo sapiens]
Length = 951
Score = 416 bits (1068), Expect = e-116
Identities = 268/602 (44%), Positives = 346/602 (57%), Gaps = 104/602 (17%)
Query: 116 LLAVRVEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSE 175
LL VR G + P W LGA LLAL+AL GL+LS L+L P E++VLR SGS
Sbjct: 204 LLRVRPRLYGPGGDLLPPAWLRALGALLLLALSALFSGLRLSLLSLDPVELRVLRNSGSA 263
Query: 176 AERAAARRLEPARRWAGCALGALLLLASLAQAALAVLLYRA-------AGQRA------- 221
AE+ ARR++ R L LLL + A AALA LY + G+
Sbjct: 264 AEQEQARRVQAVRGRGTHLLCTLLLGQAGANAALAGWLYTSLPPGFGGTGEDYSEEGIHF 323
Query: 222 --VPAVLGSAGLVFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLEL 279
+PA++ G VFL E+ P +V R LA+A ++ L+RL + PV P+G+LL+
Sbjct: 324 PWLPALV-CTGAVFLGAEICPYSVCSRHGLAIASHSVCLTRLLMAAAFPVCYPLGRLLDW 382
Query: 280 AARPG----RLRERVLELARGGGDPYSDLSK-------GVLRCRT--VEDVLTPLEDCFM 326
A R RE++LE R DPYSDL K G L RT VE+VLTPL DCFM
Sbjct: 383 ALRQEISTFYTREKLLETLRAA-DPYSDLVKEELNIIQGALELRTKVVEEVLTPLGDCFM 441
Query: 327 LDASTVLDFGVLASIMQSGHTRIPVYE-EERSNIVDMLYLKDLAFVDPEDCTPLSTITRF 385
L + VLDF ++ I++SG+TRIPVYE ++R NIVD+L++KDLAFVDP+DCTPL T+TRF
Sbjct: 442 LRSDAVLDFATVSEILRSGYTRIPVYEGDQRHNIVDILFVKDLAFVDPDDCTPLLTVTRF 501
Query: 386 YNHPLHFVFNDTKLDAVLEEFKRG--------------------------------DTVV 413
YN PLH VFNDT+LD VLEEFK+G + ++
Sbjct: 502 YNRPLHCVFNDTRLDTVLEEFKKGKSHLAIVQRVNNEGEGDPFYEVMGIVTLEDIIEEII 561
Query: 414 K-------------RKPASLMAPLKRKEEFSLFKVSDDEYKVTISPQLLLATQRFLSREV 460
K RK + +++ +FSLFK+SD E +V ISPQLLLAT RF++ EV
Sbjct: 562 KSEILDETDLYTDNRKKQRVPQRERKRHDFSLFKLSDTEMRVKISPQLLLATHRFMATEV 621
Query: 461 DVFSPLRISEKVLLHLLKHPSVNQEVRFDESNRLATHHYLYQRSQPVDYFILILQGRVEV 520
+ F L +SEK+LL LLKHP+V QE++FDE N+ A HYLYQR++PVDYF+L+LQG+VEV
Sbjct: 622 EPFKSLYLSEKILLRLLKHPNVIQELKFDEKNKKAPEHYLYQRNRPVDYFVLLLQGKVEV 681
Query: 521 EIGKEGLKFENGAFTYYGVSAL--TVPSSVHQSPVSSLQPIRHDLQPDP----------- 567
E+GKEGL+FENGAFTYYGV A+ T S V SL L P
Sbjct: 682 EVGKEGLRFENGAFTYYGVPAIMTTACSDNDVRKVGSLAGSSVFLNRSPSRCSGLNRSES 741
Query: 568 ---------GDGTH-----SSAYCPDYTVRALSDLQLIKVTRLQYLNALLATRAQNLPQS 613
G T ++ Y PDY+V LSD+Q +K+TR QY NAL A + PQS
Sbjct: 742 PNRERSDFGGSNTQLYSSSNNLYMPDYSVHILSDVQFVKITRQQYQNALTACHMDSSPQS 801
Query: 614 PE 615
P+
Sbjct: 802 PD 803
Score = 34.3 bits (77), Expect = 0.38
Identities = 84/329 (25%), Positives = 112/329 (34%), Gaps = 81/329 (24%)
Query: 1 MAAAVAAAGRLGWLFAALCLGNAA----GEAAPGPRVLGFCL----EEDGAAGAGWVRGG 52
MAAA AAA +G C A +P P L ED A G + GG
Sbjct: 1 MAAAAAAAAAVGVRLRDCCSRGAVLLLFFSLSPRPPAAAAWLLGLRPEDTAGGRVSLEGG 60
Query: 53 AARDTPDATFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLRLRAEAVRP 112
R +FLLR++ F + AP + + G+W
Sbjct: 61 TLRAAEGTSFLLRVY---FQPGPPATAAPVPSPTLNSGENGTGDWA-------------- 103
Query: 113 HSALLAVRVEPGGGAAEEAAPP--------------WALGLGAAGLLALAALARGLQLSA 158
L+ + PGGG +A P WA + G L +A
Sbjct: 104 -PRLVFIEEPPGGGGVAPSAVPTRPPGPQRCREQSDWASDVEVLGPLRPGGVA------G 156
Query: 159 LALAPAEVQVLRESGSEAERAAA---RRLEPARRWAG------CALGALLLLASLAQAAL 209
AL V+ LR+ EAER A +L W G A G LL +
Sbjct: 157 SALVQVRVRELRK--GEAERGGAGGGGKLFSLCAWDGRAWHHHGAAGGFLL-------RV 207
Query: 210 AVLLYRAAGQRAVPAVLGSAGLVFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPV 269
LY G PA L + G + L LAL+ GL RL++L PV
Sbjct: 208 RPRLYGPGGDLLPPAWLRALGALLL--------------LALSALFSGL-RLSLLSLDPV 252
Query: 270 ALPVGQLLELAARPGRLRERVLELARGGG 298
L V + AA + R ++ RG G
Sbjct: 253 ELRVLRNSGSAAEQEQARR--VQAVRGRG 279
>gi|94681046 cyclin M4 [Homo sapiens]
Length = 775
Score = 408 bits (1048), Expect = e-113
Identities = 254/615 (41%), Positives = 352/615 (57%), Gaps = 98/615 (15%)
Query: 115 ALLAVRVEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGS 174
+LL + EPG P W L LL L+ + GL L +AL P E+++++ G+
Sbjct: 168 SLLFMVEEPG-----RFLPLWLHILLITVLLVLSGIFSGLNLGLMALDPMELRIVQNCGT 222
Query: 175 EAERAAARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFL 234
E ER AR++EP RR L +LLL L +L +LL G + + G+V +
Sbjct: 223 EKERRYARKIEPIRRKGNYLLCSLLLGNVLVNTSLTILLDNLIGSGLMAVASSTIGIV-I 281
Query: 235 VGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLEL----AARPGRLRERV 290
GE++P A+ R LA+ + L++ +LLT P++ P+ +LL+ R RE++
Sbjct: 282 FGEILPQALCSRHGLAVGANTILLTKFFMLLTFPLSFPISKLLDFFLGQEIRTVYNREKL 341
Query: 291 LELARGGGDPYSDLSKGVL---------RCRTVEDVLTPLEDCFMLDASTVLDFGVLASI 341
+E+ + +PY+DL K L R +TVED++T L+DCFM+ + +LDF ++ I
Sbjct: 342 MEMLKVT-EPYNDLVKEELNMIQGALELRTKTVEDIMTQLQDCFMIRSDAILDFNTMSEI 400
Query: 342 MQSGHTRIPVYEEERSNIVDMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDA 401
M+SG+TRIPV+E+E+SNIVD+LY+KDLAFVDP+DCTPL TITRFYNHP+HFVF+DTKLDA
Sbjct: 401 MESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDA 460
Query: 402 VLEEFKRG--------------------------------DTVVKRK-----------PA 418
+LEEFK+G + ++K + +
Sbjct: 461 MLEEFKKGKSHLAIVQKVNNEGEGDPFYEVLGLVTLEDVIEEIIKSEILDESDMYTDNRS 520
Query: 419 SLMAPLKRKEEFSLFKVSDDEYKVTISPQLLLATQRFLSREVDVFSPLRISEKVLLHLLK 478
K K +FS FK +D+E KV ISPQLLLA RFL+ EV FSP ISEK+LL LLK
Sbjct: 521 RKRVSEKNKRDFSAFKDADNELKVKISPQLLLAAHRFLATEVSQFSPSLISEKILLRLLK 580
Query: 479 HPSVNQEVRFDESNRLATHHYLYQRSQPVDYFILILQGRVEVEIGKEGLKFENGAFTYYG 538
+P V QE++FDE N+ HYLY R++P DYFILILQG+VEVE GKE +KFE GAF+YYG
Sbjct: 581 YPDVIQELKFDEHNKYYARHYLYTRNKPADYFILILQGKVEVEAGKENMKFETGAFSYYG 640
Query: 539 VSALT-VPSS---VHQSPVSSLQPIRHDLQPDPGDGTHSSA---------------YCPD 579
ALT VPS H +P+S + + PD D + ++ Y D
Sbjct: 641 TMALTSVPSDRSPAHPTPLSRSASLSY---PDRTDVSTAATLAGSSNQFGSSVLGQYISD 697
Query: 580 YTVRALSDLQLIKVTRLQYLNALLATRAQNLPQSP------------ENTDLQVIPGSQT 627
++VRAL DLQ IK+TR QY N LLA+R +N PQ P E ++L V+ T
Sbjct: 698 FSVRALVDLQYIKITRQQYQNGLLASRMENSPQFPIDGCTTHMENLAEKSELPVV-DETT 756
Query: 628 RLLGEKTTTAAGSSH 642
LL E+ + +SH
Sbjct: 757 TLLNERNSLLHKASH 771
>gi|40068051 cyclin M2 isoform 3 [Homo sapiens]
Length = 552
Score = 249 bits (637), Expect = 4e-66
Identities = 140/300 (46%), Positives = 194/300 (64%), Gaps = 17/300 (5%)
Query: 133 PPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAAARRLEPARRWAG 192
P W + + LL L+ + GL L +AL P E+++++ G+E E+ A+R+EP RR
Sbjct: 254 PFWLQVIFISLLLCLSGMFSGLNLGLMALDPMELRIVQNCGTEKEKNYAKRIEPVRRQGN 313
Query: 193 CALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVPAAVSGRWTLALA 252
L +LLL L L +LL AG V V+ + G+V + GE+VP A+ R LA+
Sbjct: 314 YLLCSLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIV-IFGEIVPQAICSRHGLAVG 372
Query: 253 PRALGLSRLAVLLTLPVALPVGQLLE--LAARPGRL--RERVLELARGGGDPYSDLSKGV 308
+ L++ +++T P + PV +LL+ L G + RE++LE+ R DPY+DL K
Sbjct: 373 ANTIFLTKFFMMMTFPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRVT-DPYNDLVKEE 431
Query: 309 L---------RCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNI 359
L R +TVEDV+TPL DCFM+ +LDF ++ IM+SG+TRIPV+E ERSNI
Sbjct: 432 LNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNI 491
Query: 360 VDMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGDTVVKRKPAS 419
VD+L++KDLAFVDP+DCTPL TIT+FYNHPLHFVFNDTKLDA+LEEFK+ T +KP S
Sbjct: 492 VDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKEHT--NKKPKS 549
Score = 37.4 bits (85), Expect = 0.044
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 6 AAAGRLGWLFAALCLGNAAGEAAPGPR----VLGFCLEEDGAAGAGWVRGGAARDTPDAT 61
AAAGRL L C A G AA G ++G LE+ ++ GGA R +
Sbjct: 43 AAAGRLLPLLLLSCCCGAGGCAAVGENEETVIIGLRLEDTN--DVSFMEGGALRVSERTR 100
Query: 62 FLLRLFGPGFANSSWSWVA 80
LR++G N +WS +A
Sbjct: 101 VKLRVYGQNINNETWSRIA 119
>gi|4504079 glycosylphosphatidylinositol anchor attachment protein 1
[Homo sapiens]
Length = 621
Score = 35.8 bits (81), Expect = 0.13
Identities = 62/210 (29%), Positives = 81/210 (38%), Gaps = 22/210 (10%)
Query: 122 EPGGGAAEEAAPPWALGLGAAGLLA--LAALARGLQLSALALAPAEVQVLRESGSEAERA 179
EPGG P + G+G A L+A L + A GL L L + V +EAE
Sbjct: 405 EPGGAPGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAV 464
Query: 180 AARRLEPARRWAGCALGALLLLASLAQA--------ALAVLLYRAAGQRAVPAVLGSAGL 231
L A AG AL QA L L+Y A + S G
Sbjct: 465 VLTLL--AIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGF 522
Query: 232 VFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAARPGRLRERVL 291
+ L +VP A + PR L + L +LT P A +G L L+E L
Sbjct: 523 L-LATTMVPTAALAK---PHGPRTLYAALL--VLTSPAATLLGSLFLWR----ELQEAPL 572
Query: 292 ELARGGGDPYSDLSKGVLRCRTVEDVLTPL 321
LA G + L++GVL T +L PL
Sbjct: 573 SLAEGWQLFLAALAQGVLEHHTYGALLFPL 602
>gi|222418604 hypothetical protein LOC257407 [Homo sapiens]
Length = 295
Score = 35.4 bits (80), Expect = 0.17
Identities = 48/140 (34%), Positives = 58/140 (41%), Gaps = 18/140 (12%)
Query: 82 EGAGCREEAASPAGEW-----RALLRLRLRAEAVRPHSALLAVRVEPGGGAAEEAAPPWA 136
E AG R + W RALLR RA A +PGG AAE A P A
Sbjct: 25 EAAGGRGQVLLVGELWEREQSRALLRDFARAVFPPEPGA-----AKPGGAAAEGAGPGAA 79
Query: 137 LGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAAARRLEP------ARRW 190
G A A AA A +A A+ V VL + S A R RRL RR
Sbjct: 80 RGAQRAARAAGAAGAAA--AAARAIRSPLVFVLCRASSLAAREPRRRLREMLRDVRGRRR 137
Query: 191 AGCALGALLLLASLAQAALA 210
AG AL +L+ + + A+A
Sbjct: 138 AGAALVGVLVAEAGPEDAVA 157
>gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo
sapiens]
Length = 228
Score = 34.7 bits (78), Expect = 0.29
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 217 AGQRAVPAVLGSAGLVFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQL 276
A R +PA +GSA L F +P V R APRAL +L + +AL +L
Sbjct: 50 ASPRHLPARIGSAQLGFT--RALPPRVPAR--ARSAPRALAPPHKLILTPVVLALVFQEL 105
Query: 277 LELAARPGRLRER 289
L L +P +RER
Sbjct: 106 LLLTGKPRAIRER 118
>gi|169168886 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 34.7 bits (78), Expect = 0.29
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 126 GAAEEAAPPWALGL-GAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAAARRL 184
G EEAA A+G G G A A+ RG +L+ L A A + + A RAA RRL
Sbjct: 101 GVREEAAGHLAVGAAGLTGAHADLAVGRGAELAQLLGADAAAAAAVQHEAHARRAARRRL 160
Query: 185 --EPARRWAGCALGAL 198
PAR A A G L
Sbjct: 161 VRAPARPAAVLADGRL 176
>gi|56090582 immunity-related GTPase family, Q [Homo sapiens]
Length = 623
Score = 34.3 bits (77), Expect = 0.38
Identities = 65/181 (35%), Positives = 70/181 (38%), Gaps = 28/181 (15%)
Query: 56 DTPDATFLLRLFG-PGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLR-LRAEAVRPH 113
+ P F LR G PG + P AG A PA A + LRA A RP
Sbjct: 426 EAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAALRAGAWRP- 484
Query: 114 SALLAVRVEPGGGAAEEAAPPWALGLGAAGLLALAALA---RGLQLSALALAPAEVQVLR 170
ALLA A AAP LG L LA RGL L ALA E +
Sbjct: 485 -ALLA-------SLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPTALARRERALGL 536
Query: 171 ESGSEAERA----AARRLEPARR---WA------GCALGAL-LLLASLAQAALAVLLYRA 216
SG A RA R E R WA G ALGAL L + AA L YRA
Sbjct: 537 ASGELAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAATGGLGYRA 596
Query: 217 A 217
A
Sbjct: 597 A 597
>gi|34304360 nephrocystin 3 [Homo sapiens]
Length = 1330
Score = 33.1 bits (74), Expect = 0.84
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 110 VRPHSALLAVRVEPGGGAAEEAAP-PWALGLGAAGLLALAALARGLQLSALALAPAEVQV 168
V+P + LL G GAA A P G+GA GLL + + G + L A AE +
Sbjct: 34 VKPKARLLRNSFRRGAGAAAGAGPGSLPRGVGAGGLLGASFKSTGSSVPELEYAAAEYER 93
Query: 169 LRE 171
LR+
Sbjct: 94 LRK 96
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 32.7 bits (73), Expect = 1.1
Identities = 38/112 (33%), Positives = 46/112 (41%), Gaps = 24/112 (21%)
Query: 126 GAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAAARRLE 185
G E W L G L ALA+G Q +PA+V AE+ A +
Sbjct: 1198 GPRGEVPAVWLLDAGIITQETLEALAQGTQ------SPAQV---------AEQPAVK--- 1239
Query: 186 PARRWA-GCALGALL----LLASLAQAALAVLLYRAAGQRAVPAVLGSAGLV 232
A W GC G LL AS+AQA LL GQR + A + S LV
Sbjct: 1240 -ACLWGTGCVAGVLLQPSGAKASIAQAVRDGLLPTGLGQRLLEAQVASGFLV 1290
>gi|71164871 CUG triplet repeat, RNA-binding protein 1 isoform 3
[Homo sapiens]
Length = 486
Score = 32.7 bits (73), Expect = 1.1
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 138 GLGAAGLLALAALARGLQLS--------ALALAPAEVQVLRESGSEAERAAARRLEPARR 189
GL A L LAALA + AL + + + VL SGS +++ + P
Sbjct: 255 GLNAMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSGSSPSSSSSNSVNPI-- 312
Query: 190 WAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVPA 241
+LGAL +LA A + + AG A+ LGS+GL G + A
Sbjct: 313 ---ASLGAL---QTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEA 358
>gi|5729794 CUG triplet repeat, RNA-binding protein 1 isoform 1
[Homo sapiens]
Length = 482
Score = 32.7 bits (73), Expect = 1.1
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 138 GLGAAGLLALAALARGLQLS--------ALALAPAEVQVLRESGSEAERAAARRLEPARR 189
GL A L LAALA + AL + + + VL SGS +++ + P
Sbjct: 251 GLNAMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSGSSPSSSSSNSVNPI-- 308
Query: 190 WAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFLVGEVVPA 241
+LGAL +LA A + + AG A+ LGS+GL G + A
Sbjct: 309 ---ASLGAL---QTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEA 354
>gi|216548145 RNA pseudouridylate synthase domain containing 3
isoform 1 [Homo sapiens]
Length = 351
Score = 32.7 bits (73), Expect = 1.1
Identities = 61/232 (26%), Positives = 83/232 (35%), Gaps = 41/232 (17%)
Query: 42 GAAGAGWVRGGAARDTPDATFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALL 101
G +GW RG R P+ GF + P G+ C+ + LL
Sbjct: 16 GRFWSGWRRGLGVRPVPEDA--------GFGTEARHQRQPRGS-CQRSGPLGDQPFAGLL 66
Query: 102 RLRLRAEAVRPHSALLAVRVEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALAL 161
L E + AL A V+ G P G G L L ++ L S L L
Sbjct: 67 PKNLSREELV--DALRAAVVDRKGPLVTLNKPQGLPVTGKPGELTLFSVLPELSQS-LGL 123
Query: 162 APAEVQVLRESGSEAERAAARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRA 221
E+QV+R SG E+ L+LL+S Q A + Y +RA
Sbjct: 124 REQELQVVRASGKES-------------------SGLVLLSSCPQTASRLQKYFTHARRA 164
Query: 222 V-PAVLGSAGLVFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPVALP 272
P A V + +PAA G+ AL + V LT+PV P
Sbjct: 165 QRPTATYCA-----VTDGIPAASEGKIQAALKLEHID----GVNLTVPVKAP 207
>gi|12232395 lipid phosphate phosphatase-related protein type 2
[Homo sapiens]
Length = 343
Score = 32.7 bits (73), Expect = 1.1
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 172 SGSEAERAAARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGL 231
+GS + AAARR P + A CA A A L++R G R V L A L
Sbjct: 192 AGSPSLVAAARRAFPCKDAALCAY------AVTYTAMYVTLVFRVKGSRLVKPSLCLALL 245
Query: 232 --VFLVGEVVPAAVSGRWTLALAPRALGLSRLAVLLTLPV 269
FLVG V A W+ LA G + L+T V
Sbjct: 246 CPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVV 285
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 32.7 bits (73), Expect = 1.1
Identities = 51/176 (28%), Positives = 62/176 (35%), Gaps = 6/176 (3%)
Query: 112 PHSALLAVRVEPGGGAA--EEAAPPWALGLGAAGLLALAALA-RGLQLSALALAPAEVQV 168
P SAL A AA + PP GAA LA A R L A P
Sbjct: 287 PPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASA 346
Query: 169 LRESGSEAERAAARRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGS 228
+ G A A AR G +LG A+ AQAA A + A P GS
Sbjct: 347 AKAGGPGAS-ALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGS 405
Query: 229 AGLVFLVGEVV--PAAVSGRWTLALAPRALGLSRLAVLLTLPVALPVGQLLELAAR 282
+G V AA++ A A A +S A L TL + + AR
Sbjct: 406 SGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFTAR 461
>gi|40255047 pleckstrin homology domain containing, family H (with
MyTH4 domain) member 3 [Homo sapiens]
Length = 793
Score = 32.7 bits (73), Expect = 1.1
Identities = 44/119 (36%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 44 AGAGWVRGGAARDTPDATFLLRLFGPGFANSSWSWVAPEGAGCREEAASPAGEWRALLRL 103
AGA W G A R A R G G S +A EG G AA+ G W+ LR
Sbjct: 588 AGALWSPGLAKRRAERA----RRGGAGRTAGS---IAREGGGGAGTAAAVLGGWKR-LRG 639
Query: 104 RLRAEAVRPHSALLAVRVEPGGGAA-----EEAAPPWALGLGAAGLLALAALARGLQLS 157
RAEA+ + AL A PG GAA E + P G GA L L A+ + LS
Sbjct: 640 MGRAEAMAAYLALAAQC--PGFGAARYDVLELSTEP---GRGAPQKLCLGLGAKAMSLS 693
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 32.3 bits (72), Expect = 1.4
Identities = 44/141 (31%), Positives = 47/141 (33%), Gaps = 20/141 (14%)
Query: 42 GAAGAGWVRGGAARDTPDATFLLRLFGPGFANSS-----------WSWV----APEGAGC 86
G A G RGG R R GPG A W WV G
Sbjct: 363 GRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPL 422
Query: 87 REEAASPAGEWRALLRLRLRAEAVRPHSAL-LAVRVEPGGG--AAEEAAPPWALGLGAAG 143
+ +A P AL + LRA A RPH VR G G A A PW GL
Sbjct: 423 QGQARGPHRP-AALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWR-GLRLQT 480
Query: 144 LLALAALARGLQLSALALAPA 164
LL A G L PA
Sbjct: 481 LLLQDAPHGGAHEHVLVAVPA 501
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 32.3 bits (72), Expect = 1.4
Identities = 44/141 (31%), Positives = 47/141 (33%), Gaps = 20/141 (14%)
Query: 42 GAAGAGWVRGGAARDTPDATFLLRLFGPGFANSS-----------WSWV----APEGAGC 86
G A G RGG R R GPG A W WV G
Sbjct: 363 GRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPL 422
Query: 87 REEAASPAGEWRALLRLRLRAEAVRPHSAL-LAVRVEPGGG--AAEEAAPPWALGLGAAG 143
+ +A P AL + LRA A RPH VR G G A A PW GL
Sbjct: 423 QGQARGPHRP-AALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWR-GLRLQT 480
Query: 144 LLALAALARGLQLSALALAPA 164
LL A G L PA
Sbjct: 481 LLLQDAPHGGAHEHVLVAVPA 501
>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 492
Score = 32.3 bits (72), Expect = 1.4
Identities = 45/148 (30%), Positives = 54/148 (36%), Gaps = 29/148 (19%)
Query: 122 EPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGSEAERAAA 181
E G G A AAPP GA G ALAA A G L A A A G AAA
Sbjct: 333 EAGAGPAGGAAPPPPPPPGALGSFALAAAANG-YLGAGAGGGA-----GGGGGPLVAAAA 386
Query: 182 RRLEPARRWAGCALGALLLLASLAQAALAVLLYRAAGQRAVPAVLGSAGLVFL------- 234
A A G L LA + L+ A + V A+LG G +
Sbjct: 387 ---------AAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTG 437
Query: 235 -------VGEVVPAAVSGRWTLALAPRA 255
GE +P + R T+ +P A
Sbjct: 438 ARIQISKKGEFLPGTRNRRVTITGSPAA 465
>gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]
Length = 513
Score = 32.0 bits (71), Expect = 1.9
Identities = 53/187 (28%), Positives = 70/187 (37%), Gaps = 42/187 (22%)
Query: 80 APEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVRVEPGGGAAEEAAPPWALGL 139
A E A + A GE + +R++A R H L RV+P G L L
Sbjct: 83 AHEQAAGLLQVAQGLGELH-VAEVRVKAHHHRAHVGLQR-RVQPVAGT---------LAL 131
Query: 140 GAAGLLALAALARGLQLSALALAPAEVQVLRESGSEA----ERAAARRLEPARRWAGCAL 195
G A A A GLQL A V + R +A ER A R E + AG
Sbjct: 132 QWLGPHAHAGDAHGLQLRGQGWAAQHVGLGRGGAGQALAQVERGAVGRAEDLQAGAGP-- 189
Query: 196 GALLLLASLAQAALAVLLYRAAGQRAVPAVLG--SAGLVFLVGEVVPAAVSGRWTLALAP 253
R A + P +LG SAGL +VG+ A +G + P
Sbjct: 190 -------------------RGAAEAQAPQLLGVGSAGLAAVVGDEAQALAAG----SQRP 226
Query: 254 RALGLSR 260
+ LG +R
Sbjct: 227 QGLGRAR 233
>gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo
sapiens]
Length = 513
Score = 32.0 bits (71), Expect = 1.9
Identities = 53/187 (28%), Positives = 70/187 (37%), Gaps = 42/187 (22%)
Query: 80 APEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVRVEPGGGAAEEAAPPWALGL 139
A E A + A GE + +R++A R H L RV+P G L L
Sbjct: 83 AHEQAAGLLQVAQGLGELH-VAEVRVKAHHHRAHVGLQR-RVQPVAGT---------LAL 131
Query: 140 GAAGLLALAALARGLQLSALALAPAEVQVLRESGSEA----ERAAARRLEPARRWAGCAL 195
G A A A GLQL A V + R +A ER A R E + AG
Sbjct: 132 QWLGPHAHAGDAHGLQLRGQGWAAQHVGLGRGGAGQALAQVERGAVGRAEDLQAGAGP-- 189
Query: 196 GALLLLASLAQAALAVLLYRAAGQRAVPAVLG--SAGLVFLVGEVVPAAVSGRWTLALAP 253
R A + P +LG SAGL +VG+ A +G + P
Sbjct: 190 -------------------RGAAEAQAPQLLGVGSAGLAAVVGDEAQALAAG----SQRP 226
Query: 254 RALGLSR 260
+ LG +R
Sbjct: 227 QGLGRAR 233
>gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo
sapiens]
Length = 513
Score = 32.0 bits (71), Expect = 1.9
Identities = 53/187 (28%), Positives = 70/187 (37%), Gaps = 42/187 (22%)
Query: 80 APEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVRVEPGGGAAEEAAPPWALGL 139
A E A + A GE + +R++A R H L RV+P G L L
Sbjct: 83 AHEQAAGLLQVAQGLGELH-VAEVRVKAHHHRAHVGLQR-RVQPVAGT---------LAL 131
Query: 140 GAAGLLALAALARGLQLSALALAPAEVQVLRESGSEA----ERAAARRLEPARRWAGCAL 195
G A A A GLQL A V + R +A ER A R E + AG
Sbjct: 132 QWLGPHAHAGDAHGLQLRGQGWAAQHVGLGRGGAGQALAQVERGAVGRAEDLQAGAGP-- 189
Query: 196 GALLLLASLAQAALAVLLYRAAGQRAVPAVLG--SAGLVFLVGEVVPAAVSGRWTLALAP 253
R A + P +LG SAGL +VG+ A +G + P
Sbjct: 190 -------------------RGAAEAQAPQLLGVGSAGLAAVVGDEAQALAAG----SQRP 226
Query: 254 RALGLSR 260
+ LG +R
Sbjct: 227 QGLGRAR 233
>gi|157743252 pecanex-like 3 [Homo sapiens]
Length = 2034
Score = 32.0 bits (71), Expect = 1.9
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 457 SREVDVFSPLRISEKVLLHLLKHPSVNQEVRFDESNRLATHHYLYQRSQPVDYFILILQG 516
SR + + S L + +LL +V++ FD+++ A H++ + Y + G
Sbjct: 624 SRALTLPSALHFASSLLL-TRAGANVHEACTFDDTSEGAVHYFYDESGVRRSYTFGLAGG 682
Query: 517 RVEVEIGKEGLKFENGAFTYYGVSALTVPSSVHQSPVSSLQPIRHDLQPDP 567
E +G++G + NGA+ + S SS H + V + LQP P
Sbjct: 683 GYENPVGQQGEQTANGAWDRHSHS-----SSFHSADVPEATGGLNLLQPRP 728
>gi|112789555 ADAM metallopeptidase with thrombospondin type 1
motif, 19 preproprotein [Homo sapiens]
Length = 1207
Score = 32.0 bits (71), Expect = 1.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 121 VEPGGGAAEEAAPPWALGLGAAGLLALAALARGLQLSALALAPAEVQVLRESGS 174
V+P GG+ A P W G+G G A ++ ++A P E V S S
Sbjct: 48 VDPAGGSGGSADPGWVRGVGGGGSARAQAAGSSREVRSVAPVPLEEPVEGRSES 101
>gi|157042792 coiled-coil domain containing 64B [Homo sapiens]
Length = 508
Score = 32.0 bits (71), Expect = 1.9
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 554 SSLQPIRHDLQ--------PDPGDGTHSSAYCPDYTVRALSDLQL----IKVTRLQYLNA 601
+ LQ +R +LQ DPG+ HS+ D V +L L + + R
Sbjct: 375 AELQSLREELQRQKELRAQEDPGEALHSALSDRDEAVNKALELSLQLNRVSLERDSLSRE 434
Query: 602 LLATRAQNLPQSPE----NTDLQVIPGSQTRLLGEKTTTAAGSS 641
LL Q + + E D+QV+ G Q R +K +A+ SS
Sbjct: 435 LLRAIRQKVALTQELEAWQDDMQVVIGQQLRSQRQKELSASASS 478
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 31.6 bits (70), Expect = 2.4
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 69 PGFANSSWSWVAPEGAGCREEAASPAGEWRALLRLRLRAEAVRPHSALLAVRVEPGGGAA 128
PG + + AP+GA +E E + L R + EA R LLA + AA
Sbjct: 526 PGPSPAKHFLAAPKGALSLQELERQFEETQMKLFGRAQLEAERNAGGLLAFALAENVAAA 585
Query: 129 EEAAP---PWALGLGAAGLLALAAL 150
P PWA GL AGL LA L
Sbjct: 586 RPYFPLPDPWAAGL--AGLPGLAGL 608
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,257,560
Number of Sequences: 37866
Number of extensions: 1265305
Number of successful extensions: 3896
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 3848
Number of HSP's gapped (non-prelim): 78
length of query: 659
length of database: 18,247,518
effective HSP length: 109
effective length of query: 550
effective length of database: 14,120,124
effective search space: 7766068200
effective search space used: 7766068200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.