CRNKL1 2740

Name: CRNKL1	Sequence: fasta or formatted (848aa)		NCBI GI: 124256489
Description: crooked neck-like 1 protein		Referenced in: Capping and Splicing Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 71 2 C cysteine 1.1 9 1 D aspartate 4.6 39 2 E glutamate 11.3 96 3 F phenylalanine 4.4 37 2 G glycine 3.1 26 1 H histidine 2.4 20 2 I isoleucine 4.7 40 2 K lysine 7.5 64 2 L leucine 8.0 68 2 M methionine 1.7 14 1 N asparagine 3.7 31 1 P proline 3.5 30 4 Q glutamine 5.0 42 3 R arginine 8.7 74 2 S serine 5.4 46 2 T threonine 4.2 36 2 V valine 5.5 47 2 W tryptophan 2.5 21 1 Y tyrosine 4.4 37 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 crooked neck-like 1 protein PRPF6 0.039 PRP6 pre-mRNA processing factor 6 homolog XAB2 0.031 XPA binding protein 2 CSTF3 0.028 cleavage stimulation factor subunit 3 isoform 1 [Homo... PDCD11 0.024 programmed cell death 11 LOC653889 0.021 PREDICTED: similar to U5 snRNP-associated 102 kDa p... UTP6 0.021 hepatocellular carcinoma-associated antigen 66 [Homo... SART3 0.016 squamous cell carcinoma antigen recognized by T cells... TMTC1 0.015 transmembrane and tetratricopeptide repeat containin... PRPF39 0.011 PRP39 pre-mRNA processing factor 39 homolog TTC27 0.009 tetratricopeptide repeat domain 27 MYH13 0.008 myosin, heavy polypeptide 13, skeletal muscle [Homo... C14orf102 0.008 hypothetical protein LOC55051 isoform 2 C14orf102 0.008 hypothetical protein LOC55051 isoform 1 CSTF3 0.007 cleavage stimulation factor subunit 3 isoform 2 [Hom... CEP120 0.006 coiled-coil domain containing 100 NARG1 0.006 NMDA receptor regulated 1 MAP9 0.006 aster-associated protein TCHH 0.006 trichohyalin TJAP1 0.006 tight junction associated protein 1 isoform b [Homo... TJAP1 0.006 tight junction associated protein 1 isoform b [Homo... TJAP1 0.006 tight junction associated protein 1 isoform b [Homo... TJAP1 0.006 tight junction associated protein 1 isoform b [Homo... TJAP1 0.006 tight junction associated protein 1 isoform a [Homo... TJAP1 0.006 tight junction associated protein 1 isoform a [Homo... MYH6 0.006 myosin heavy chain 6 WDR87 0.006 NYD-SP11 protein STIP1 0.006 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... ZC3H13 0.005 zinc finger CCCH-type containing 13 CCDC30 0.005 coiled-coil domain containing 30 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.