Guide to the Human Genome
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Name: KLF4 Sequence: fasta or formatted (479aa) NCBI GI: 194248077
Description:

Kruppel-like factor 4 (gut)

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         40           3
 C cysteine            2.5         12           1
 D aspartate           4.4         21           1
 E glutamate           4.4         21           2
 F phenylalanine       3.1         15           1
 G glycine             9.6         46           3
 H histidine           4.4         21           1
 I isoleucine          1.3          6           1
 K lysine              3.8         18           1
 L leucine             8.6         41           2
 M methionine          1.7          8           1
 N asparagine          2.3         11           2
 P proline            13.6         65           3
 Q glutamine           2.7         13           2
 R arginine            6.3         30           2
 S serine             10.9         52           5
 T threonine           5.2         25           2
 V valine              3.8         18           3
 W tryptophan          0.8          4           1
 Y tyrosine            2.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kruppel-like factor 4 (gut) 
KLF2                  0.227   Kruppel-like factor 
KLF1                  0.171   Kruppel-like factor 1 (erythroid) 
KLF5                  0.147   Kruppel-like factor 5 
KLF3                  0.143   Kruppel-like factor 3 (basic) 
KLF7                  0.137   Kruppel-like factor 7 (ubiquitous) 
KLF8                  0.136   Kruppel-like factor 8 isoform 1 
KLF6                  0.135   Kruppel-like factor 6 isoform A 
KLF12                 0.135   Kruppel-like factor 12 
KLF16                 0.110   BTE-binding protein 4 
KLF17                 0.110   zinc finger protein 393 
KLF11                 0.109   Kruppel-like factor 11 
KLF15                 0.109   Kruppel-like factor 15 
KLF13                 0.109   Kruppel-like factor 13 
KLF10                 0.107   Kruppel-like factor 10 isoform b 
KLF10                 0.107   Kruppel-like factor 10 isoform a 
KLF9                  0.101   Kruppel-like factor 9 
KLF14                 0.101   Kruppel-like factor 14 
SP8                   0.097   Sp8 transcription factor isoform 1 
SP8                   0.097   Sp8 transcription factor isoform 2 
SP5                   0.097   Sp5 transcription factor 
SP1                   0.095   Sp1 transcription factor isoform a 
SP1                   0.095   Sp1 transcription factor isoform b 
SP9                   0.094   Sp9 transcription factor homolog 
SP4                   0.094   Sp4 transcription factor 
SP6                   0.093   Sp6 transcription factor 
SP3                   0.091   Sp3 transcription factor isoform 2 
SP3                   0.091   Sp3 transcription factor isoform 1 
WT1                   0.090   Wilms tumor 1 isoform D 
WT1                   0.090   Wilms tumor 1 isoform C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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