Guide to the Human Genome
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Name: LRRC33 Sequence: fasta or formatted (692aa) NCBI GI: 38348406
Description:

leucine rich repeat containing 33

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         44           3
 C cysteine            2.9         20           2
 D aspartate           4.9         34           2
 E glutamate           4.3         30           2
 F phenylalanine       4.0         28           2
 G glycine             7.1         49           2
 H histidine           2.7         19           1
 I isoleucine          2.2         15           2
 K lysine              1.4         10           2
 L leucine            19.7        136           3
 M methionine          2.3         16           1
 N asparagine          5.5         38           2
 P proline             4.9         34           2
 Q glutamine           3.8         26           1
 R arginine            5.8         40           2
 S serine              9.2         64           3
 T threonine           4.8         33           2
 V valine              4.8         33           1
 W tryptophan          1.4         10           1
 Y tyrosine            1.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 33 
LRRC32                0.209   leucine rich repeat containing 32 precursor 
LRRC32                0.209   leucine rich repeat containing 32 precursor 
IGFALS                0.063   insulin-like growth factor binding protein, acid la...
IGFALS                0.063   insulin-like growth factor binding protein, acid labi...
LGR6                  0.063   leucine-rich repeat-containing G protein-coupled rec...
LGR5                  0.058   leucine-rich repeat-containing G protein-coupled rece...
LGR6                  0.055   leucine-rich repeat-containing G protein-coupled rec...
GP5                   0.055   glycoprotein V (platelet) 
CHADL                 0.055   chondroadherin-like 
LRIG1                 0.053   leucine-rich repeats and immunoglobulin-like domains...
LRRC15                0.051   leucine rich repeat containing 15 isoform a 
LRRC15                0.051   leucine rich repeat containing 15 isoform b 
LGR4                  0.050   leucine-rich repeat-containing G protein-coupled re...
PODN                  0.049   podocan 
SLIT1                 0.048   slit homolog 1 
TLR3                  0.046   toll-like receptor 3 
CPN2                  0.046   carboxypeptidase N, polypeptide 2, 83kD 
PODNL1                0.046   podocan-like 1 isoform 2 
PODNL1                0.046   podocan-like 1 isoform 1 
SLIT3                 0.045   slit homolog 3 
SHOC2                 0.045   soc-2 suppressor of clear homolog 
LINGO1                0.044   leucine-rich repeat neuronal 6A 
LRIG2                 0.044   leucine-rich repeats and immunoglobulin-like domains ...
TLR8                  0.043   toll-like receptor 8 
TLR7                  0.043   toll-like receptor 7 
LINGO2                0.042   leucine rich repeat and Ig domain containing 2 [Homo...
LRRN2                 0.042   leucine rich repeat neuronal 2 
LRRN2                 0.042   leucine rich repeat neuronal 2 
TLR9                  0.042   toll-like receptor 9 isoform A precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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