Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 38348294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38348294 hypothetical protein LOC339145 [Homo sapiens]
(304 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38348294 hypothetical protein LOC339145 [Homo sapiens] 606 e-174
gi|150170658 hypothetical protein LOC137392 [Homo sapiens] 241 8e-64
gi|188528616 testis specific, 10 [Homo sapiens] 45 1e-04
gi|13376858 testis specific, 10 [Homo sapiens] 45 1e-04
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 40 0.003
gi|8923904 bridging integrator 3 [Homo sapiens] 39 0.004
gi|4758646 kinesin family member 3B [Homo sapiens] 39 0.006
gi|153945715 myosin VC [Homo sapiens] 39 0.007
gi|14195601 protein phosphatase 1, regulatory (inhibitor) subuni... 39 0.007
gi|14195599 protein phosphatase 1, regulatory (inhibitor) subuni... 39 0.007
gi|4557321 apolipoprotein A-I preproprotein [Homo sapiens] 37 0.017
gi|109134347 NY-REN-58 antigen [Homo sapiens] 37 0.022
gi|109134355 NY-REN-58 antigen [Homo sapiens] 37 0.022
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 37 0.028
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 36 0.037
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 36 0.037
gi|145309326 laminin, gamma 1 precursor [Homo sapiens] 36 0.048
gi|217035164 coiled-coil domain containing 27 [Homo sapiens] 36 0.048
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 35 0.063
gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens] 35 0.063
gi|31652236 cut-like homeobox 1 isoform b [Homo sapiens] 35 0.063
gi|45505178 cancer antigen 1 [Homo sapiens] 35 0.063
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 35 0.063
gi|19224660 protein kinase C and casein kinase substrate in neur... 35 0.063
gi|31542652 coiled-coil domain containing 94 [Homo sapiens] 35 0.063
gi|4758648 kinesin family member 5B [Homo sapiens] 35 0.082
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.082
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 35 0.082
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 35 0.082
gi|32171238 BAI1-associated protein 2-like 1 [Homo sapiens] 35 0.11
>gi|38348294 hypothetical protein LOC339145 [Homo sapiens]
Length = 304
Score = 606 bits (1562), Expect = e-174
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 MNIVFSRDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSE 60
MNIVFSRDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSE
Sbjct: 1 MNIVFSRDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSE 60
Query: 61 NPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNH 120
NPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNH
Sbjct: 61 NPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNH 120
Query: 121 EIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQK 180
EIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQK
Sbjct: 121 EIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQK 180
Query: 181 FFCDFVTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYDTRLLANTSP 240
FFCDFVTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYDTRLLANTSP
Sbjct: 181 FFCDFVTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYDTRLLANTSP 240
Query: 241 PPSVLQSLASQGTLQVQLSRANEDPEHPHANHGRFSLCEWVVKGQPAHCVCGQGGHLMLP 300
PPSVLQSLASQGTLQVQLSRANEDPEHPHANHGRFSLCEWVVKGQPAHCVCGQGGHLMLP
Sbjct: 241 PPSVLQSLASQGTLQVQLSRANEDPEHPHANHGRFSLCEWVVKGQPAHCVCGQGGHLMLP 300
Query: 301 GHSL 304
GHSL
Sbjct: 301 GHSL 304
>gi|150170658 hypothetical protein LOC137392 [Homo sapiens]
Length = 289
Score = 241 bits (614), Expect = 8e-64
Identities = 125/265 (47%), Positives = 181/265 (68%), Gaps = 6/265 (2%)
Query: 6 SRDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPELR 65
+R++Q + ++ V+N EK+FG+ C + AAY RKTARLRDKAD LV ++ +A +E P L+
Sbjct: 8 NRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAATETPHLK 67
Query: 66 ATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQL 125
+ FA++ AK+QDYRQA+VERLE KVV PLK YG +K R ++K +N E KQL
Sbjct: 68 LGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQL 127
Query: 126 EKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQKFFCDF 185
+LE+ RQ++PSD+ +ISQAET +QRAA+D+SRT+ LEET++ F+RQK+KD++ F +F
Sbjct: 128 TQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMKDIKTIFSEF 187
Query: 186 VTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYDTRL---LANT-SPP 241
+TIEM+FH KA+EVY++A+Q ++ D + DL FR + Y +RL AN+ SP
Sbjct: 188 ITIEMLFHGKALEVYTAAYQNIQNIDEDEDLEVFRNSLYA--PDYSSRLDIVRANSKSPL 245
Query: 242 PSVLQSLASQGTLQVQLSRANEDPE 266
L + GT QV R +D +
Sbjct: 246 QRSLSAKCVSGTGQVSTCRLRKDQQ 270
>gi|188528616 testis specific, 10 [Homo sapiens]
Length = 698
Score = 44.7 bits (104), Expect = 1e-04
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 7 RDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPELRA 66
++ + M+N +A E+ Q L + +R+R + D+ +L A E L
Sbjct: 294 KEKTISGMKNIIAEMEQASRQCTEALIVCEQDVSRMRRQLDETNDELAQIAR-ERDILAH 352
Query: 67 TMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHV-QNHEIKQL 125
E AK + QA ++L N L +++ T E+ K K++ ++ E +
Sbjct: 353 DNDNLQEQFAKAKQENQALSKKL-NDTHNELNDIKQKVQDTNLEVNKLKNILKSEESENR 411
Query: 126 EKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQKFFCDF 185
+ +E+LR+ + + E + +++ D++ TL+LE + +LK+ D
Sbjct: 412 QMMEQLRKANEDAENW----ENKARQSEADNN--TLKLELITAEAEGNRLKEK----VDS 461
Query: 186 VTIEMVFHAKAVEVYSSAFQTLEK 209
+ E+ H A Y S TL K
Sbjct: 462 LNREVEQHLNAERSYKSQISTLHK 485
>gi|13376858 testis specific, 10 [Homo sapiens]
Length = 698
Score = 44.7 bits (104), Expect = 1e-04
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 7 RDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPELRA 66
++ + M+N +A E+ Q L + +R+R + D+ +L A E L
Sbjct: 294 KEKTISGMKNIIAEMEQASRQCTEALIVCEQDVSRMRRQLDETNDELAQIAR-ERDILAH 352
Query: 67 TMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHV-QNHEIKQL 125
E AK + QA ++L N L +++ T E+ K K++ ++ E +
Sbjct: 353 DNDNLQEQFAKAKQENQALSKKL-NDTHNELNDIKQKVQDTNLEVNKLKNILKSEESENR 411
Query: 126 EKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQKFFCDF 185
+ +E+LR+ + + E + +++ D++ TL+LE + +LK+ D
Sbjct: 412 QMMEQLRKANEDAENW----ENKARQSEADNN--TLKLELITAEAEGNRLKEK----VDS 461
Query: 186 VTIEMVFHAKAVEVYSSAFQTLEK 209
+ E+ H A Y S TL K
Sbjct: 462 LNREVEQHLNAERSYKSQISTLHK 485
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 39.7 bits (91), Expect = 0.003
Identities = 38/179 (21%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 63 ELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEI 122
EL+ +R E+L +++ + R ++ N + Q++Q + +KFK ++ +
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQIETQQRKFKASRDSIL 736
Query: 123 KQLEKLEKLRQKSPS----DQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDL 178
+++ L++ RQ+S Q+ + E + A++S+R +L+ E D + L+D
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLH--AMESTRESLKAELGTDLLSQLSLED- 793
Query: 179 QKFFCDFVTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYDTRLLAN 237
K V+ + + L++ + R LL+ R K++G+ +T L N
Sbjct: 794 ---------------QKRVDALNDEIRQLQQEN--RQLLNERIKLEGIITRVETYLNEN 835
Score = 29.6 bits (65), Expect = 3.5
Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Query: 14 MENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPELRATMRGFAE 73
++N++ TE + + + D + K+L N + L+ E
Sbjct: 883 LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKK----EE 938
Query: 74 DLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQ 133
+ K+++ E E LK +++Q E+KK+ HV + Q + ++
Sbjct: 939 CMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKE 998
Query: 134 KSPSDQQMISQ 144
K Q+ + +
Sbjct: 999 KLIKRQEELDR 1009
>gi|8923904 bridging integrator 3 [Homo sapiens]
Length = 253
Score = 39.3 bits (90), Expect = 0.004
Identities = 24/137 (17%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 75 LAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQK 134
+ ++ + Q +V +++ V+ PLK +G+ +K+ + + K+EK +K
Sbjct: 89 MKRMDAFNQEKVNQIQKTVIEPLKKFGSVFPSLNMAVKRREQALQDYRRLQAKVEKYEEK 148
Query: 135 SPSDQQM--ISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQKFFCDFVTIEMVF 192
+ + + QA ++ D QL E + F +L Q F + ++V+
Sbjct: 149 EKTGPVLAKLHQAREELRPVREDFEAKNRQLLEEMPRFYGSRLDYFQPSFESLIRAQVVY 208
Query: 193 HAKAVEVYSSAFQTLEK 209
+++ +++ L++
Sbjct: 209 YSEMHKIFGDLSHQLDQ 225
>gi|4758646 kinesin family member 3B [Homo sapiens]
Length = 747
Score = 38.9 bits (89), Expect = 0.006
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 55 DFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVN------PLKLYGAQIKQTR 108
D+ + +L R ED + V + + ++ E K+ + ++ GA+IK
Sbjct: 412 DYWREQQEKLEIEKRAIVEDHSLVAEEKMRLLKEKEKKMEDLRREKDAAEMLGAKIKAME 471
Query: 109 AEIKKF-KHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETV 167
+++ K++ +H +Q + LE+ RQ+ ++ E +Q+ TL+L+ET
Sbjct: 472 SKLLVGGKNIVDHTNEQQKILEQKRQEIAEQKRR----EREIQQQMESRDEETLELKETY 527
Query: 168 DGFQRQ---KLKDLQKFFCDFVTIEMVFH 193
Q++ K K L+K F ++ H
Sbjct: 528 SSLQQEVDIKTKKLKKLFSKLQAVKAEIH 556
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 38.5 bits (88), Expect = 0.007
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 25/170 (14%)
Query: 41 RLRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLY 100
+L + +L K+L D N EN G E L + R VE+
Sbjct: 886 QLTYRVQRLQKKLED-QNKEN-------HGLVEKLTSLAALRAGDVEK------------ 925
Query: 101 GAQIKQTRAEIKKFK-HVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRT 159
I++ AE++K H +N+E K + + +K Q+ S+ ET+ ++ +
Sbjct: 926 ---IQKLEAELEKAATHRRNYEEKGKRYRDAVEEKLAKLQKHNSELETQKEQIQLKLQEK 982
Query: 160 TLQLEETVDGFQRQKLKDLQKFFCDFVTIEMVFHAKAVEVYSSAFQTLEK 209
T +L+E +D +Q D+QK + +E F K + Y Q+L++
Sbjct: 983 TEELKEKMDNLTKQLFDDVQKEERQRMLLEKSFELKTQD-YEKQIQSLKE 1031
>gi|14195601 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform b [Homo sapiens]
Length = 998
Score = 38.5 bits (88), Expect = 0.007
Identities = 22/126 (17%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 39 TARLRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLK 98
T+R+ + +++ K+L + A +EN +L+ ++ +LA ++ + ++ + K +
Sbjct: 871 TSRVEEDSNRDYKKLYESALTENQKLKTKLQEAQLELADIKSKLEKVAQQKQEKTSDRSS 930
Query: 99 LYGAQIKQTRAEIKKFKHVQN-----HEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAA 153
+ + ++ RA +K ++ H++KQ++ L+++ ++ ++ + +++ R+ +
Sbjct: 931 VLEMEKRERRALERKMSEMEEEMKNLHQLKQIQTLKQMNEQLQAENRALTRVVARLSE-S 989
Query: 154 VDSSRT 159
++SS T
Sbjct: 990 IESSDT 995
>gi|14195599 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform d [Homo sapiens]
Length = 224
Score = 38.5 bits (88), Expect = 0.007
Identities = 22/126 (17%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 39 TARLRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLK 98
T+R+ + +++ K+L + A +EN +L+ ++ +LA ++ + ++ + K +
Sbjct: 97 TSRVEEDSNRDYKKLYESALTENQKLKTKLQEAQLELADIKSKLEKVAQQKQEKTSDRSS 156
Query: 99 LYGAQIKQTRAEIKKFKHVQN-----HEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAA 153
+ + ++ RA +K ++ H++KQ++ L+++ ++ ++ + +++ R+ +
Sbjct: 157 VLEMEKRERRALERKMSEMEEEMKNLHQLKQIQTLKQMNEQLQAENRALTRVVARLSE-S 215
Query: 154 VDSSRT 159
++SS T
Sbjct: 216 IESSDT 221
>gi|4557321 apolipoprotein A-I preproprotein [Homo sapiens]
Length = 267
Score = 37.4 bits (85), Expect = 0.017
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 36 TRKTARLRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVN 95
T ++LR++ + ++ D E LR M ++DL +V+ Q ++ + K
Sbjct: 78 TSTFSKLREQLGPVTQEFWDNLEKETEGLRQEM---SKDLEEVKAKVQPYLDDFQKKWQE 134
Query: 96 PLKLYGAQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVD 155
++LY +++ RAE+++ + HE++ EKL SP ++M +A RA VD
Sbjct: 135 EMELYRQKVEPLRAELQEGARQKLHELQ--EKL------SPLGEEMRDRA-----RAHVD 181
Query: 156 SSRTTL 161
+ RT L
Sbjct: 182 ALRTHL 187
>gi|109134347 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 37.0 bits (84), Expect = 0.022
Identities = 47/234 (20%), Positives = 95/234 (40%), Gaps = 32/234 (13%)
Query: 42 LRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYG 101
L+ + L Q+ A SEN DL + VERL+ + N
Sbjct: 471 LKQQISSLQIQVTSLAQSEN------------DLLNSNQMLKEMVERLKQECRN------ 512
Query: 102 AQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTL 161
+ + +A+++ K ++ +I+ LE+ KL ++ ++ +QA+ ++QRAA+ +
Sbjct: 513 FRSQAEKAQLEAEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKS 572
Query: 162 QLEETVDGFQRQKLKDLQKFFCDFVTIEMVFHAKAVEVYSSAFQTLEKYD-LERDLLDFR 220
E + Q +K++ L+ + T V + + V E Y L++ L D +
Sbjct: 573 LHENKLKRLQ-EKVEVLEAKKEELETENQVLNRQNV--------PFEDYTRLQKRLKDIQ 623
Query: 221 AKMQGVYGHYDTRLLANTSPPPSVLQSLASQGTLQVQLSRANEDPEHPHANHGR 274
+ + + + +L PP + + ++ Q + V P H R
Sbjct: 624 RR----HNEFRSLILVPNMPPTASINPVSFQSSAMVPSMELPFPPHMQEEQHQR 673
>gi|109134355 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 37.0 bits (84), Expect = 0.022
Identities = 47/234 (20%), Positives = 95/234 (40%), Gaps = 32/234 (13%)
Query: 42 LRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYG 101
L+ + L Q+ A SEN DL + VERL+ + N
Sbjct: 471 LKQQISSLQIQVTSLAQSEN------------DLLNSNQMLKEMVERLKQECRN------ 512
Query: 102 AQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTL 161
+ + +A+++ K ++ +I+ LE+ KL ++ ++ +QA+ ++QRAA+ +
Sbjct: 513 FRSQAEKAQLEAEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKS 572
Query: 162 QLEETVDGFQRQKLKDLQKFFCDFVTIEMVFHAKAVEVYSSAFQTLEKYD-LERDLLDFR 220
E + Q +K++ L+ + T V + + V E Y L++ L D +
Sbjct: 573 LHENKLKRLQ-EKVEVLEAKKEELETENQVLNRQNV--------PFEDYTRLQKRLKDIQ 623
Query: 221 AKMQGVYGHYDTRLLANTSPPPSVLQSLASQGTLQVQLSRANEDPEHPHANHGR 274
+ + + + +L PP + + ++ Q + V P H R
Sbjct: 624 RR----HNEFRSLILVPNMPPTASINPVSFQSSAMVPSMELPFPPHMQEEQHQR 673
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 36.6 bits (83), Expect = 0.028
Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 18/188 (9%)
Query: 1 MNIVFSRDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKAD-------QLVKQL 53
MN Q++ N+ N +K + + + + L+ + D + V QL
Sbjct: 160 MNTQLELSEQLKFQNNSEDNVKKLQEEIEKIRPGFEEQILYLQKQLDATTDEKKETVTQL 219
Query: 54 IDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKK 113
+ + + + + E+L +++ Q +V+ L ++ A K+ AEI K
Sbjct: 220 QNIIEANSQHYQKNINSLQEELLQLKAIHQEEVKELMCQIE-------ASAKEHEAEINK 272
Query: 114 FKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEET--VDGFQ 171
++ + +KQ E EK QK + + A D+ ++ L+E V+
Sbjct: 273 LNELKENLVKQCEASEKNIQKKYECE--LENLRKATSNANQDNQICSILLQENTFVEQVV 330
Query: 172 RQKLKDLQ 179
+K+K L+
Sbjct: 331 NEKVKHLE 338
Score = 30.4 bits (67), Expect = 2.0
Identities = 49/242 (20%), Positives = 101/242 (41%), Gaps = 36/242 (14%)
Query: 9 SQVRVMENTVANTEKYFGQF------CSLLAAYTRKTARLRDKADQLVKQLIDFANSENP 62
S V+ +E + N EK + L+A +K K Q VK+ ++ SE
Sbjct: 944 SSVKELEEKIENLEKECKEKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKD 1003
Query: 63 ELRATMRGF---AEDLAKVQDYRQAQVERLETK-------------VVNPLKLYGAQIKQ 106
+L A+MR AE + + Q E+L+ + + L+ Q +
Sbjct: 1004 QLSASMRDLIQGAESYKNLLLEYEKQSEQLDVEKERANNFEHRIEDLTRQLRNSTLQCET 1063
Query: 107 TRAE----IKKFKHVQ-NHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTL 161
++ + + + +Q N ++ +++ LE R K+ D+++ ++ + Q+ + + T
Sbjct: 1064 INSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIK-EHATTVN 1122
Query: 162 QLEETVDGFQRQKLKDLQKFFCDFVTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRA 221
+LEE Q++K K LQK + ++ + + +E D ER + +
Sbjct: 1123 ELEELQVQLQKEK-KQLQKTMQELELVKK-------DAQQTTLMNMEIADYERLMKELNQ 1174
Query: 222 KM 223
K+
Sbjct: 1175 KL 1176
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 36.2 bits (82), Expect = 0.037
Identities = 30/146 (20%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 37 RKTARLRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNP 96
R+ RL+ K +QL + +ID+ + + + ED DYR +Q+ + +++
Sbjct: 164 RENKRLKKKNEQLCQDIIDYQKQIDSQKETLLSRRGED----SDYR-SQLSKKNYELIQY 218
Query: 97 LKLYGAQIKQTRAEIKKFKHVQNHEIKQ-----LEKLEKLRQKSPSDQQMISQAETRVQR 151
L QT E + VQN E+++ ++++EK+ + + ++ Q + + +
Sbjct: 219 LDEI-----QTLTEANEKIEVQNQEMRKNLEESVQEMEKMTDEYNRMKAIVHQTDNVIDQ 273
Query: 152 AAVDSSRTTLQLEETVDGFQRQKLKD 177
++ LQ++E D + + +D
Sbjct: 274 LKKENDHYQLQVQELTDLLKSKNEED 299
Score = 31.6 bits (70), Expect = 0.91
Identities = 20/102 (19%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 64 LRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIK 123
L ++ ++DL + ++ + +V+ E + + + ++K+ +AE++ K++ + K
Sbjct: 1640 LLVKLKKVSQDLERQREITELKVKEFENIKLQLQENHEDEVKKVKAEVEDLKYLLDQSQK 1699
Query: 124 QLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEE 165
+ + L+ Q + ++ S+A T R V+ ++ L L+E
Sbjct: 1700 ESQCLKSELQ---AQKEANSRAPTTTMRNLVERLKSQLALKE 1738
Score = 31.2 bits (69), Expect = 1.2
Identities = 53/274 (19%), Positives = 116/274 (42%), Gaps = 31/274 (11%)
Query: 11 VRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFAN--SENPELRA-- 66
+++ T+AN + Q +L Y R + R++ ++VK+ + + EL+A
Sbjct: 1535 LKIAHQTIANMQARLNQKEEVLKKYQRLLEKAREEQREIVKKHEEDLHILHHRLELQADS 1594
Query: 67 ---TMRGFAEDLAKVQD---------YRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKF 114
+ A DL K R A++E+ + + L ++K+ ++++
Sbjct: 1595 SLNKFKQTAWDLMKQSPTPVPTNKHFIRLAEMEQTVAEQDDSLSSLLVKLKKVSQDLERQ 1654
Query: 115 KHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQK 174
+ + ++K+ E ++ Q++ D+ +AE + +D S+ Q ++ + Q
Sbjct: 1655 REITELKVKEFENIKLQLQENHEDEVKKVKAEVEDLKYLLDQSQKESQCLKS----ELQA 1710
Query: 175 LKDLQKFFCDFVTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYDTRL 234
K+ +V K+ A + ++ L R LL+ RA+M + R+
Sbjct: 1711 QKEANSRAPTTTMRNLVERLKS----QLALKEKQQKALSRALLELRAEMTAA---AEERI 1763
Query: 235 LANTSPPPSVL--QSLASQGT--LQVQLSRANED 264
++ TS + L Q + + T L+ Q+ NE+
Sbjct: 1764 ISATSQKEAHLNVQQIVDRHTRELKTQVEDLNEN 1797
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 36.2 bits (82), Expect = 0.037
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 47 DQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQ 106
DQLVK+L D E+++ + K+Q +AQ+E + K +K Q+++
Sbjct: 426 DQLVKRLEDLVKKHTVEIKSVRSSVEAERKKLQREVEAQLEEVRKKSEKEIK----QLEE 481
Query: 107 TRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEET 166
+A + E+ +LE+ + + P+ + Q R + +++ L+L+ET
Sbjct: 482 EKAALNVKLQNSLLEVLRLEEFIQQNKTRPTGAEESPQELGRQHCSILETQDPCLKLDET 541
Score = 33.9 bits (76), Expect = 0.18
Identities = 22/101 (21%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 71 FAEDLAKVQDYRQAQVERLETKVVNPL----KLYGAQIKQTRAEIKKFKHVQNHEIKQLE 126
+ EDL K++ + + + L+ ++V L K + +IK R+ ++ + E++
Sbjct: 406 YEEDLRKIKHQTEEEKKHLKDQLVKRLEDLVKKHTVEIKSVRSSVEAERKKLQREVEA-- 463
Query: 127 KLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETV 167
+LE++R+KS + + + + + + +S L+LEE +
Sbjct: 464 QLEEVRKKSEKEIKQLEEEKAALNVKLQNSLLEVLRLEEFI 504
Score = 29.3 bits (64), Expect = 4.5
Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 7/156 (4%)
Query: 30 SLLAAYTRKTARLRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERL 89
SLL T K RL + +L + L + EDL ++ + E+L
Sbjct: 582 SLLKEKTSKIQRLEEDWQSQKAKLQAQVSQMQQALEQCTSNYREDLQALKQLSDLEREKL 641
Query: 90 ETKVVNPLKLYGAQIKQTRAE----IKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQA 145
+ ++ + A Q A ++ + ++ E+K E E+L+++S Q+ Q
Sbjct: 642 QRELQETTQQNHAMKAQLEASHQRALRMLEKARHQELKATE--ERLKKESSHSLQIQHQT 699
Query: 146 ETRVQRAAVDSSRTTLQLE-ETVDGFQRQKLKDLQK 180
+A + +R LQ E E + Q L+ L++
Sbjct: 700 HRLELQALEEKARQELQEERERMQAQQALLLESLRQ 735
>gi|145309326 laminin, gamma 1 precursor [Homo sapiens]
Length = 1609
Score = 35.8 bits (81), Expect = 0.048
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 50 VKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRA 109
+ Q I AN + E + + A D + ++ + + ER+ + V A+ ++T A
Sbjct: 1394 INQTITEANEKTREAQQALGSAAADATEAKN-KAHEAERIASAVQKNATSTKAEAERTFA 1452
Query: 110 EIKKFKHVQNHEIKQLEKLEK-LRQK---SPSDQQMISQAETRVQRAAVDSSR 158
E+ + N+ +KQL++ EK L++K + D M A Q A +++ +
Sbjct: 1453 EVTDLDNEVNNMLKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAEINARK 1505
>gi|217035164 coiled-coil domain containing 27 [Homo sapiens]
Length = 656
Score = 35.8 bits (81), Expect = 0.048
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 42 LRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYG 101
LR++ QL F+N + M G E ++ + +++ER TK +
Sbjct: 471 LRERRQQLQAMTDKFSNLREDKKHQEMMGLIEKDNQLLRQQVSELERKLTKRDCVISELD 530
Query: 102 AQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTL 161
++ Q + +++ QNH L++ ++L++ S ++MI QAE R A++SS++ L
Sbjct: 531 TKVSQLQEQVELD---QNH----LQRWKQLQEDLQSKKEMIQQAEQHT-RVALESSQSRL 582
Query: 162 Q 162
+
Sbjct: 583 E 583
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 35.4 bits (80), Expect = 0.063
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 48 QLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQT 107
QL Q + +EN +LR T+ + ++ A+V++ ++ ++ L+ K+ + Y +K
Sbjct: 102 QLKVQRLHDIETENQKLRETLEEYNKEFAEVKN-QEVTIKALKEKI----REYEQTLKN- 155
Query: 108 RAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQ--RAAVDSSRTTL-QLE 164
+AE + Q + EK KL++ S + +AE +VQ + A++ +RT L L+
Sbjct: 156 QAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLK 215
Query: 165 ETVDGFQRQKLKDLQKFFCD 184
D K +++ D
Sbjct: 216 TKYDEETTAKADEIEMIMTD 235
>gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens]
Length = 676
Score = 35.4 bits (80), Expect = 0.063
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 48 QLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQT 107
QL Q + +EN +LR T+ + ++ A+V++ ++ ++ L+ K+ + Y +K
Sbjct: 113 QLKVQRLHDIETENQKLRETLEEYNKEFAEVKN-QEVTIKALKEKI----REYEQTLKN- 166
Query: 108 RAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQ--RAAVDSSRTTL-QLE 164
+AE + Q + EK KL++ S + +AE +VQ + A++ +RT L L+
Sbjct: 167 QAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLK 226
Query: 165 ETVDGFQRQKLKDLQKFFCD 184
D K +++ D
Sbjct: 227 TKYDEETTAKADEIEMIMTD 246
>gi|31652236 cut-like homeobox 1 isoform b [Homo sapiens]
Length = 678
Score = 35.4 bits (80), Expect = 0.063
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 48 QLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQT 107
QL Q + +EN +LR T+ + ++ A+V++ ++ ++ L+ K+ + Y +K
Sbjct: 113 QLKVQRLHDIETENQKLRETLEEYNKEFAEVKN-QEVTIKALKEKI----REYEQTLKN- 166
Query: 108 RAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQ--RAAVDSSRTTL-QLE 164
+AE + Q + EK KL++ S + +AE +VQ + A++ +RT L L+
Sbjct: 167 QAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLK 226
Query: 165 ETVDGFQRQKLKDLQKFFCD 184
D K +++ D
Sbjct: 227 TKYDEETTAKADEIEMIMTD 246
>gi|45505178 cancer antigen 1 [Homo sapiens]
Length = 641
Score = 35.4 bits (80), Expect = 0.063
Identities = 26/150 (17%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 41 RLRDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQDYRQA----------QVERLE 90
+L++ ++L++ +N + + T++ E LA Q + Q Q ++++
Sbjct: 220 KLKENVEELIEDKYKIILEKN-DTKKTLQNLEEVLANTQKHLQESRNDKEMLQLQFKKIK 278
Query: 91 TKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQ 150
V + Y +++Q + ++ + K+ E++E+L+Q ++ + A ++
Sbjct: 279 ANYVCLQERYMTEMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLK 338
Query: 151 RAAVDSSRTTLQLEETVDGFQRQKLKDLQK 180
R + L L+E +++ L++ QK
Sbjct: 339 REKEAQEQEFLSLQEEFQKLEKENLEERQK 368
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 35.4 bits (80), Expect = 0.063
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 111 IKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGF 170
I KF+ + HE ++++KLR+K S + M E ++ S +T + E V+
Sbjct: 786 IFKFRQPEAHEKPSQKRVKKLRKKQGSKEDMTRSEE------SISSGTSTARSVEEVEEE 839
Query: 171 QRQKLKDLQKFFCDFVTIEMV-------FHAKAVEVYSSAFQTLEKYDLERD 215
Q+++ F+T E++ HAK E + Q LE+ +ER+
Sbjct: 840 NDQEME-------SFITEEVLGQQKKSPLHAKMDESKEGSIQGLEEMQVERE 884
>gi|19224660 protein kinase C and casein kinase substrate in neurons
3 [Homo sapiens]
Length = 424
Score = 35.4 bits (80), Expect = 0.063
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 32/167 (19%)
Query: 65 RATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQ 124
R + GF E A +R+AQ L+ ++K+ A K + + E
Sbjct: 120 RPVLGGFRESRAAEDGFRKAQKPWLK------------RLKEVEASKKSYHAARKDEKTA 167
Query: 125 LEKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQKFFCD 184
+ + S Q+ + + + RV+R A ++ +T Q E+T+ R
Sbjct: 168 QTRESHAKADSAVSQEQLRKLQERVERCAKEAEKTKAQYEQTLAELHR------------ 215
Query: 185 FVTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYD 231
+ + +E AF+T + + +R LL F+ + ++ H D
Sbjct: 216 -------YTPRYMEDMEQAFETCQAAERQR-LLFFKDMLLTLHQHLD 254
>gi|31542652 coiled-coil domain containing 94 [Homo sapiens]
Length = 323
Score = 35.4 bits (80), Expect = 0.063
Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 55 DFANSENPELRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKF 114
D N++ R F + ++ ++ Q ER + ++ NP+K+ + K ++ E++
Sbjct: 92 DPENTDYTMEHGATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVL 151
Query: 115 KHVQNHEIKQL-EKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEE 165
+++Q E+K L ++ + ++ Q +S+ E R Q+ D T LEE
Sbjct: 152 ENLQ--ELKDLNQRQAHVDFEAMLRQHRLSEEERRRQQQEEDEQETAALLEE 201
>gi|4758648 kinesin family member 5B [Homo sapiens]
Length = 963
Score = 35.0 bits (79), Expect = 0.082
Identities = 38/196 (19%), Positives = 90/196 (45%), Gaps = 19/196 (9%)
Query: 47 DQLVKQLIDFANSENPELRATMRGFAEDLAKV------QDYRQAQVERLETKVVNPLKLY 100
D +++L + N + M +DLA++ D +Q + + + +LY
Sbjct: 534 DAELQKLKEMTNHQKKRAAEMMASLLKDLAEIGIAVGNNDVKQPEGTGMIDEEFTVARLY 593
Query: 101 GAQIK-QTRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQAETRVQRAA---VDS 156
+++K + + +K+ K +++ + + +K+E+ ++ + Q ISQ E +++ +
Sbjct: 594 ISKMKSEVKTMVKRCKQLESTQTESNKKMEENEKELAACQLRISQHEAKIKSLTEYLQNV 653
Query: 157 SRTTLQLEETVDGFQ--------RQKLKDLQKFFCDFV-TIEMVFHAKAVEVYSSAFQTL 207
+ QLEE+VD ++K+ +++K + V T V A ++ S
Sbjct: 654 EQKKRQLEESVDALSEELVQLRAQEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHRETHQ 713
Query: 208 EKYDLERDLLDFRAKM 223
++ RD ++ +AK+
Sbjct: 714 KQISSLRDEVEAKAKL 729
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 35.0 bits (79), Expect = 0.082
Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 4 VFSRDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPE 63
V ++ QVR E V E GQ + ++ ++ +Q+ KQ + E
Sbjct: 173 VREQEGQVREQEGQVREQE---GQMGEQEGQMGEQEEQMGEQEEQMQKQ-----EEQMGE 224
Query: 64 LRATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIK 123
MR E + + ++ QV++ E +V + Q +Q R + ++ + + +K
Sbjct: 225 QEEQMRKQEEQMGEQEE----QVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQMLK 280
Query: 124 QLEKLEKLRQKSPSDQQMISQAE-TRVQRAAVDSSRTTLQLEETVDGFQRQKL 175
Q E+ E+ Q ++QM Q E R Q + ++ +E G Q +++
Sbjct: 281 QKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQM 333
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 35.0 bits (79), Expect = 0.082
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 20/182 (10%)
Query: 27 QFCSLLAAYTRKTARLRDKADQLVK-QLIDFAN-SENPELRATMRGFAEDLAKVQDYRQA 84
+F +L A K +L K + ++ A E ELR T++ E LAK ++ A
Sbjct: 1044 EFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKELEELRQTVKQLKEQLAK-KEKEHA 1102
Query: 85 QVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQLEKLEKLRQKSPSDQQMISQ 144
+++ + G +++ RAE+ K + + +Q + LE+ S
Sbjct: 1103 SGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLER------------SL 1150
Query: 145 AETRVQRAAVDSSRTTL--QLEETVD--GFQRQKLKDLQKFFCDFVTIEMVFHAKAVEVY 200
R RA DS+ TL QLEE G + L Q+ F T ++ H+KA + +
Sbjct: 1151 EAERASRAERDSALETLQGQLEEKAQELGHSQSALASAQRELAAFRT-KVQDHSKAEDEW 1209
Query: 201 SS 202
+
Sbjct: 1210 KA 1211
Score = 30.4 bits (67), Expect = 2.0
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Query: 43 RDKADQLVKQLIDFANSENPELRATMRGFAEDLAKVQD--------YRQAQVERLETKVV 94
+ + D+ + QL + EN +L +R FA L ++QD + +A E LE +
Sbjct: 306 KSQMDRKINQL----SEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQAQ 361
Query: 95 NPLKLYGAQIKQTRAEIKKFKHVQNHEIKQLEK-LEKLRQKSPSDQQM----ISQAETRV 149
+L A Q + +++ + ++ QLE+ L +L+ P ++ + Q ET
Sbjct: 362 LEKELSAA--LQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLK 419
Query: 150 QRAAVDSSRTT-----LQLEETVDGFQRQKL 175
Q AA ++ T +++ ET G Q KL
Sbjct: 420 QEAATLAANNTQLQARVEMLETERGQQEAKL 450
Score = 28.5 bits (62), Expect = 7.7
Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 19 ANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPELRATM---------- 68
A+ + Q SL + T A ++ + DQ + L A + +L T+
Sbjct: 491 AHGARLTAQVASLTSELTTLNATIQQQ-DQELAGLKQQAKEKQAQLAQTLQQQEQASQGL 549
Query: 69 RGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQLEKL 128
R E L+ ++ Q++ + K + + Q+ E + ++ +KQLE L
Sbjct: 550 RHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEAL 609
Query: 129 EKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQ 179
E K + + I Q + +V A DS++T++ + +K+++LQ
Sbjct: 610 E----KEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQ 656
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 35.0 bits (79), Expect = 0.082
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 14 MENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPELRAT---MRG 70
+E ++ ++Y G + +LRD+ + L+++L + E +L
Sbjct: 614 LEGVISGLQEYLGTIKGQATQAQNECRKLRDEKETLLQRLTE-VEQERDQLEIVAMDAEN 672
Query: 71 FAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQL-EKLE 129
++LA+++ Q Q E V L+ + AE++ ++++ E QL E+LE
Sbjct: 673 MRKELAELESALQEQHE-----VNASLQQTQGDLSAYEAELEARLNLRDAEANQLKEELE 727
Query: 130 KLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQ---KLKDLQ 179
K+ + + +Q + QAE +R A+ ++ Q E + + KLK LQ
Sbjct: 728 KVTRLTQLEQSAL-QAELEKERQALKNALGKAQFSEEKEQENSELHAKLKHLQ 779
>gi|32171238 BAI1-associated protein 2-like 1 [Homo sapiens]
Length = 511
Score = 34.7 bits (78), Expect = 0.11
Identities = 25/137 (18%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 77 KVQDYRQAQVERLETKVVNPL-KLYGAQIKQTRAEIKKFKHVQNHEIKQLEK----LEKL 131
K+ + ++ ++++ L K +K A +K+++ ++++ LEK L+K+
Sbjct: 84 KLNESLDENFKKFHKEIIHELEKKIELDVKYMNATLKRYQTEHKNKLESLEKSQAELKKI 143
Query: 132 RQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQKF------FCDF 185
R+KS + + ++ +SR + + DG + L++ ++F C F
Sbjct: 144 RRKSQGSRNALKYEHKEIEYVETVTSRQSEIQKFIADGCKEALLEEKRRFCFLVDKHCGF 203
Query: 186 VTIEMVFHAKAVEVYSS 202
+H ++ E+ +S
Sbjct: 204 ANHIHYYHLQSAELLNS 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,426,779
Number of Sequences: 37866
Number of extensions: 413481
Number of successful extensions: 2187
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 1969
Number of HSP's gapped (non-prelim): 389
length of query: 304
length of database: 18,247,518
effective HSP length: 102
effective length of query: 202
effective length of database: 14,385,186
effective search space: 2905807572
effective search space used: 2905807572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.