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Search of human proteins with 37700256
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37700256 transmembrane protein 95 [Homo sapiens]
(184 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37700256 transmembrane protein 95 [Homo sapiens] 380 e-106
gi|4504077 glycoprotein IX (platelet) precursor [Homo sapiens] 32 0.31
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens] 31 0.53
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ... 31 0.53
gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isofor... 30 1.2
gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isofor... 30 1.2
gi|148833508 notch1 preproprotein [Homo sapiens] 29 2.6
gi|239754299 PREDICTED: hypothetical protein [Homo sapiens] 29 2.6
gi|239748838 PREDICTED: hypothetical protein XP_002346834 [Homo ... 29 2.6
gi|239742865 PREDICTED: hypothetical protein XP_002342666 [Homo ... 29 2.6
gi|4503835 frizzled 9 [Homo sapiens] 29 2.6
gi|20270341 lysophospholipase-like 1 [Homo sapiens] 29 2.6
gi|5730095 tumor necrosis factor receptor superfamily, member 9 ... 28 4.5
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 28 4.5
gi|117168263 RasGEF domain family, member 1A [Homo sapiens] 28 4.5
gi|7657307 LIM domains containing 1 [Homo sapiens] 28 5.8
gi|56912202 speedy C [Homo sapiens] 28 5.8
gi|239048909 checkpoint with forkhead and ring finger domains is... 27 7.6
gi|239048905 checkpoint with forkhead and ring finger domains is... 27 7.6
gi|239048862 checkpoint with forkhead and ring finger domains is... 27 7.6
gi|239048792 checkpoint with forkhead and ring finger domains is... 27 7.6
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 27 7.6
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 27 7.6
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 27 7.6
gi|239048907 checkpoint with forkhead and ring finger domains is... 27 7.6
gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens] 27 9.9
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 27 9.9
gi|169167981 PREDICTED: hypothetical protein [Homo sapiens] 27 9.9
>gi|37700256 transmembrane protein 95 [Homo sapiens]
Length = 184
Score = 380 bits (976), Expect = e-106
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 MWRLALGGVFLAAAQACVFCRLPAHDLSGRLARLCSQMEARQKECGASPDFSAFALDEVS 60
MWRLALGGVFLAAAQACVFCRLPAHDLSGRLARLCSQMEARQKECGASPDFSAFALDEVS
Sbjct: 1 MWRLALGGVFLAAAQACVFCRLPAHDLSGRLARLCSQMEARQKECGASPDFSAFALDEVS 60
Query: 61 MNKVTEKTHRVLRVMEIKEAVSSLPSYWSWLRKTKLPEYTREALCPPACPLPLLSPAGGS 120
MNKVTEKTHRVLRVMEIKEAVSSLPSYWSWLRKTKLPEYTREALCPPACPLPLLSPAGGS
Sbjct: 61 MNKVTEKTHRVLRVMEIKEAVSSLPSYWSWLRKTKLPEYTREALCPPACPLPLLSPAGGS 120
Query: 121 TTLYNCSTCKGTEVSCWPRKRCFPGSQDLWEAKILLLSIFGAFLLLGVLSLLVESHHLQA 180
TTLYNCSTCKGTEVSCWPRKRCFPGSQDLWEAKILLLSIFGAFLLLGVLSLLVESHHLQA
Sbjct: 121 TTLYNCSTCKGTEVSCWPRKRCFPGSQDLWEAKILLLSIFGAFLLLGVLSLLVESHHLQA 180
Query: 181 KSGL 184
KSGL
Sbjct: 181 KSGL 184
>gi|4504077 glycoprotein IX (platelet) precursor [Homo sapiens]
Length = 177
Score = 32.0 bits (71), Expect = 0.31
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 96 LPEYTREALCPPACPLPLLSPAG--GSTTLYNCSTCKGTEVSCWPRKRCFPGSQDLWEAK 153
L + T EAL C P L+ G G T Y +C + W R PG LW+
Sbjct: 100 LEDRTPEALLQVRCASPSLAAHGPLGRLTGYQLGSCGWQLQASWVR----PGV--LWDVA 153
Query: 154 ILLLSIFGAFLLLGVLSLLVES 175
++ ++ G LL G+L E+
Sbjct: 154 LVAVAALGLALLAGLLCATTEA 175
>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
Length = 167
Score = 31.2 bits (69), Expect = 0.53
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 109 CPLPLLSPAGGSTTLYNCSTCKGTEVSCW----PRKRCFP 144
C L + SP G +Y C+T + TE+ C+ + CFP
Sbjct: 93 CFLDIRSPGLGDAAMYLCATSRDTELQCFLLSVHKPHCFP 132
>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
Length = 167
Score = 31.2 bits (69), Expect = 0.53
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 109 CPLPLLSPAGGSTTLYNCSTCKGTEVSCW----PRKRCFP 144
C L + SP G +Y C+T + TE+ C+ + CFP
Sbjct: 93 CFLDIRSPGLGDAAMYLCATSRDTELQCFLLSVHKPHCFP 132
>gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isoform B
[Homo sapiens]
Length = 336
Score = 30.0 bits (66), Expect = 1.2
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 2 WRLALGGVFLAAAQACVFCRLPAHDLSGRLARL-CSQMEARQKECGASPDFSAFALDEVS 60
W G L A C C+ H L +L CSQ E ++ SP+ + +
Sbjct: 136 WCDLCGREVLRQALRCTNCKFTCHPECRSLIQLDCSQQEGLSRD-RPSPESTLTVTFSQN 194
Query: 61 MNKVTEKTHRVLRVMEIKEAVSS 83
+ K E+T R + EIK+ + S
Sbjct: 195 VCKPVEETQRPPTLQEIKQKIDS 217
>gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isoform A
[Homo sapiens]
Length = 418
Score = 30.0 bits (66), Expect = 1.2
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 2 WRLALGGVFLAAAQACVFCRLPAHDLSGRLARL-CSQMEARQKECGASPDFSAFALDEVS 60
W G L A C C+ H L +L CSQ E ++ SP+ + +
Sbjct: 136 WCDLCGREVLRQALRCTNCKFTCHPECRSLIQLDCSQQEGLSRD-RPSPESTLTVTFSQN 194
Query: 61 MNKVTEKTHRVLRVMEIKEAVSS 83
+ K E+T R + EIK+ + S
Sbjct: 195 VCKPVEETQRPPTLQEIKQKIDS 217
>gi|148833508 notch1 preproprotein [Homo sapiens]
Length = 2555
Score = 28.9 bits (63), Expect = 2.6
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 107 PACPLPLLSPAGGSTTLYNCSTCKGTEVSCWPRKRC 142
P C P SP G YN TC+ T S + R C
Sbjct: 1381 PECQFPASSPCLGGNPCYNQGTCEPTSESPFYRCLC 1416
>gi|239754299 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 28.9 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 103 ALCP--PACPLPL---LSPAGGSTTLYNCSTCKGTEVSCW 137
+LCP P+ PLP LSP S++ +C C T S W
Sbjct: 6 SLCPSLPSNPLPACDYLSPLSPSSSGSSCKACSSTAASPW 45
>gi|239748838 PREDICTED: hypothetical protein XP_002346834 [Homo
sapiens]
Length = 139
Score = 28.9 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 103 ALCP--PACPLPL---LSPAGGSTTLYNCSTCKGTEVSCW 137
+LCP P+ PLP LSP S++ +C C T S W
Sbjct: 6 SLCPSLPSNPLPACDYLSPLSPSSSGSSCKACSSTAASPW 45
>gi|239742865 PREDICTED: hypothetical protein XP_002342666 [Homo
sapiens]
Length = 139
Score = 28.9 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 103 ALCP--PACPLPL---LSPAGGSTTLYNCSTCKGTEVSCW 137
+LCP P+ PLP LSP S++ +C C T S W
Sbjct: 6 SLCPSLPSNPLPACDYLSPLSPSSSGSSCKACSSTAASPW 45
>gi|4503835 frizzled 9 [Homo sapiens]
Length = 591
Score = 28.9 bits (63), Expect = 2.6
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 107 PACPLPLLSP-AGGSTTLYNCSTCKGTEVSCWPRKRCFPGSQDLWEAK-----ILLLSIF 160
PA P L P AGGS T N + E S RC PG + W + ++ ++++
Sbjct: 179 PARPPGDLGPGAGGSGTCENPEKFQYVEKSRSCAPRCGPGVEVFWSRRDKDFALVWMAVW 238
Query: 161 GAFLLLG----VLSLLVESHHLQ 179
A VL+ L+E H Q
Sbjct: 239 SALCFFSTAFTVLTFLLEPHRFQ 261
>gi|20270341 lysophospholipase-like 1 [Homo sapiens]
Length = 237
Score = 28.9 bits (63), Expect = 2.6
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 3 RLALGGVFLAAAQACVFCRLPAHDLSGRLA------RLCSQMEARQKECGASPDFSAF-- 54
R+ +GG + A D++G A + + +A QK G P+
Sbjct: 117 RILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHG 176
Query: 55 ALDEVSMNKVTEKTHRVLRVMEIKEAVSSLPSYWSWLRKTKL 96
DE+ ++ E+T+ +L+ + + S P+ + L KT+L
Sbjct: 177 TADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTEL 218
>gi|5730095 tumor necrosis factor receptor superfamily, member 9
precursor [Homo sapiens]
Length = 255
Score = 28.1 bits (61), Expect = 4.5
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 101 REALCPPACPLPLLSPAGGSTTLYNCSTCKG 131
R +C P CP S AGG T C CKG
Sbjct: 41 RNQICSP-CPPNSFSSAGGQRTCDICRQCKG 70
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 28.1 bits (61), Expect = 4.5
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 34 LCSQMEARQKECGASPDFSAFALDEVSMNKVTEKTHRVLRVMEIKEAVSSLP 85
L S ++ + GASP+ +A E+ +++T + H V + K+ S +P
Sbjct: 2811 LLSPVKPQTLASGASPEINAVKKKEMPRSELTPERHTVHTIQTSKDDTSDVP 2862
>gi|117168263 RasGEF domain family, member 1A [Homo sapiens]
Length = 481
Score = 28.1 bits (61), Expect = 4.5
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 27/112 (24%)
Query: 22 LPAHDLSGRLARLCSQMEARQKECGAS----PDFSAFAL---------------DEVSMN 62
+P HDL R+ ++C + + +Q E G FSA + DE +M
Sbjct: 81 MPPHDLLARVGQICVE-QKQQLEAGPEKAKLKSFSAKIVQLLKEWTEAFPYDFQDEKAMA 139
Query: 63 KVTEKTHRVLRVME----IKEAVSSLPS--YWSWLRKTKLPEYTREALCPPA 108
++ THRV + E +K+A++ + S +++L E RE L PPA
Sbjct: 140 ELKAITHRVTQCDEENGTVKKAIAQMTQSLLLSLAARSQLQE-LREKLRPPA 190
>gi|7657307 LIM domains containing 1 [Homo sapiens]
Length = 676
Score = 27.7 bits (60), Expect = 5.8
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 14/50 (28%)
Query: 108 ACPLPLLSPAGGSTTL-------------YNCSTCKGTEVSCWPRKRCFP 144
AC LP+L P G T+ Y+C C G E++ RC+P
Sbjct: 599 ACGLPILPPEGSDETIRVVSMDRDYHVECYHCEDC-GLELNDEDGHRCYP 647
>gi|56912202 speedy C [Homo sapiens]
Length = 293
Score = 27.7 bits (60), Expect = 5.8
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 78 KEAVSSLPSYWSWLRKTKLPEYTREALCPPACPLPLLSPAGGSTTLYNCSTC 129
+E ++ P +W+W R + + +CP +P+ P G + +CS C
Sbjct: 171 EEVMAKEPFHWAWTRDRRPHHGGVQRVCP---QVPVRLPRGPGLSPPHCSPC 219
>gi|239048909 checkpoint with forkhead and ring finger domains
isoform 5 [Homo sapiens]
Length = 572
Score = 27.3 bits (59), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 97 PEYTREALCPPACPLP 112
PEY R+A PP CP P
Sbjct: 340 PEYRRQAAQPPHCPAP 355
>gi|239048905 checkpoint with forkhead and ring finger domains
isoform 3 [Homo sapiens]
Length = 652
Score = 27.3 bits (59), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 97 PEYTREALCPPACPLP 112
PEY R+A PP CP P
Sbjct: 420 PEYRRQAAQPPHCPAP 435
>gi|239048862 checkpoint with forkhead and ring finger domains
isoform 2 [Homo sapiens]
Length = 663
Score = 27.3 bits (59), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 97 PEYTREALCPPACPLP 112
PEY R+A PP CP P
Sbjct: 432 PEYRRQAAQPPHCPAP 447
>gi|239048792 checkpoint with forkhead and ring finger domains
isoform 1 [Homo sapiens]
Length = 664
Score = 27.3 bits (59), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 97 PEYTREALCPPACPLP 112
PEY R+A PP CP P
Sbjct: 432 PEYRRQAAQPPHCPAP 447
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 27.3 bits (59), Expect = 7.6
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 117 AGGSTTLYNCSTCKGTEVSCWPRKRCFPGS 146
+GG T +Y +G +S WP+++ PGS
Sbjct: 1655 SGGETCIYPDKKSEGVRISSWPKEK--PGS 1682
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 27.3 bits (59), Expect = 7.6
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 117 AGGSTTLYNCSTCKGTEVSCWPRKRCFPGS 146
+GG T +Y +G +S WP+++ PGS
Sbjct: 1604 SGGETCIYPDKKSEGVRISSWPKEK--PGS 1631
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 27.3 bits (59), Expect = 7.6
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 117 AGGSTTLYNCSTCKGTEVSCWPRKRCFPGS 146
+GG T +Y +G +S WP+++ PGS
Sbjct: 1643 SGGETCIYPDKKSEGVRISSWPKEK--PGS 1670
>gi|239048907 checkpoint with forkhead and ring finger domains
isoform 4 [Homo sapiens]
Length = 623
Score = 27.3 bits (59), Expect = 7.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 97 PEYTREALCPPACPLP 112
PEY R+A PP CP P
Sbjct: 391 PEYRRQAAQPPHCPAP 406
>gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]
Length = 772
Score = 26.9 bits (58), Expect = 9.9
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 46 GASPDFSAFALDEVSMNKVTEKTHRVLRVMEIKEAVSSLPSYWSWLRKTKL--PEYTREA 103
G+S SAFA+ VS + + H+ +E++ A S + + +R + PE
Sbjct: 295 GSSAFLSAFAVHPVSEGTLMYRLHKRFSALELERAYSEIEQLQAQIRNLTVLTPEGEAGL 354
Query: 104 LCPPACPLP 112
P P P
Sbjct: 355 SWPVGLPAP 363
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 26.9 bits (58), Expect = 9.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 97 PEYTREALCPPACPLPLLSPAGGSTTLYNCSTCKGTEVSCWPRKRCFPGSQDLWEA 152
P + EA+ PP+ L P+G +TT T GT + PGS EA
Sbjct: 397 PPSSGEAVAPPSTSAALSRPSGAATT-----TAAGTSATAASATASGPGSGSAPEA 447
>gi|169167981 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 26.9 bits (58), Expect = 9.9
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 13/75 (17%)
Query: 70 RVLRVMEIKEAVSSLPSYWSWLRKTKLPEYTREALCPPACPLPLLSPAGGSTTLYNCSTC 129
+V++VM++ + + + SW R T PE + + PL + G S+
Sbjct: 14 QVMQVMQVVQVMQVVQLQASWQRSTLAPEVAMKRVGITETPLEMSQSFGTSS-------- 65
Query: 130 KGTEVS-----CWPR 139
+GT+ CWP+
Sbjct: 66 RGTQDQQVPSICWPQ 80
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,442,948
Number of Sequences: 37866
Number of extensions: 331396
Number of successful extensions: 1420
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1409
Number of HSP's gapped (non-prelim): 29
length of query: 184
length of database: 18,247,518
effective HSP length: 96
effective length of query: 88
effective length of database: 14,612,382
effective search space: 1285889616
effective search space used: 1285889616
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Table of Contents |
Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.