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Search of human proteins with 37594461
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37594461 nudix-type motif 6 isoform b [Homo sapiens] 308 1e-84
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] 308 1e-84
gi|41393549 nudix-type motif 10 [Homo sapiens] 49 2e-06
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] 47 7e-06
gi|37221177 nudix-type motif 11 [Homo sapiens] 46 1e-05
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] 44 4e-05
gi|5729804 nudix-type motif 3 [Homo sapiens] 39 0.001
gi|22219467 nudix-type motif 2 [Homo sapiens] 34 0.038
gi|22219465 nudix-type motif 2 [Homo sapiens] 34 0.038
gi|4502125 nudix-type motif 2 [Homo sapiens] 34 0.038
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 34 0.038
gi|31542498 DCP2 decapping enzyme [Homo sapiens] 33 0.086
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 31 0.33
gi|188536065 CD36 antigen [Homo sapiens] 30 0.55
gi|188536063 CD36 antigen [Homo sapiens] 30 0.55
gi|48375178 CD36 antigen [Homo sapiens] 30 0.55
gi|48375176 CD36 antigen [Homo sapiens] 30 0.55
gi|48375180 CD36 antigen [Homo sapiens] 30 0.55
gi|32469515 nudix-type motif 8 [Homo sapiens] 28 2.1
gi|13899267 nudix-type motif 12 [Homo sapiens] 27 4.7
gi|37594464 nudix-type motif 5 [Homo sapiens] 27 6.1
>gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
Length = 147
Score = 308 bits (789), Expect = 1e-84
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL 60
MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL
Sbjct: 1 MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL 60
Query: 61 KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL 120
KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL
Sbjct: 61 KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL 120
Query: 121 PAVYTGLFYKLYHKELPENYKTMKGID 147
PAVYTGLFYKLYHKELPENYKTMKGID
Sbjct: 121 PAVYTGLFYKLYHKELPENYKTMKGID 147
>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
Length = 316
Score = 308 bits (789), Expect = 1e-84
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL 60
MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL
Sbjct: 170 MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL 229
Query: 61 KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL 120
KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL
Sbjct: 230 KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL 289
Query: 121 PAVYTGLFYKLYHKELPENYKTMKGID 147
PAVYTGLFYKLYHKELPENYKTMKGID
Sbjct: 290 PAVYTGLFYKLYHKELPENYKTMKGID 316
>gi|41393549 nudix-type motif 10 [Homo sapiens]
Length = 164
Score = 48.5 bits (114), Expect = 2e-06
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNP 46
W PGG EPEE+ G AVREV+EE G+K + +L + +Q+ +P
Sbjct: 45 WIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDP 89
>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
Length = 181
Score = 46.6 bits (109), Expect = 7e-06
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIIC--- 58
W PGG EPEE+ G AVREV+EE G+K + +L I +Q N ++ +Y++
Sbjct: 46 WIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFEQ--NQDRKHRTYVYVLTVTE 103
Query: 59 RLKPYSFTINFCQEECLRCEWMDLNDLAK 87
L+ + ++N ++ EW + D K
Sbjct: 104 ILEDWEDSVNIGRKR----EWFKVEDAIK 128
>gi|37221177 nudix-type motif 11 [Homo sapiens]
Length = 164
Score = 45.8 bits (107), Expect = 1e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH 43
W PGG EPEE+ G AVREV+EE G+K + +L + +Q+
Sbjct: 45 WIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQN 86
>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
Length = 180
Score = 44.3 bits (103), Expect = 4e-05
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSI 39
W PGG EPEE+ G AVREV+EE G+K + +L I
Sbjct: 46 WIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGI 83
>gi|5729804 nudix-type motif 3 [Homo sapiens]
Length = 172
Score = 39.3 bits (90), Expect = 0.001
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLK 61
W PGG EPEE+ AVREV EE G+K ++ I + + + L+
Sbjct: 46 WIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLE 105
Query: 62 PYSFTINFCQEECLRCEWMDLNDLAKT-ENTTPITSRVARLLLYGY 106
+ ++N ++ EW + D K + P+ + L GY
Sbjct: 106 DWEDSVNIGRKR----EWFKIEDAIKVLQYHKPVQASYFETLRQGY 147
>gi|22219467 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFG--KSDMYIICR 59
W P G EP ED +TA+RE EE GI++ +++ ++ N A K+ +Y +
Sbjct: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAE 97
Query: 60 LKPYSFTINFCQEECLRCEWMDLND 84
+K Y I E W+ L +
Sbjct: 98 VKDYDVEIRLSHEH-QAYRWLGLEE 121
>gi|22219465 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFG--KSDMYIICR 59
W P G EP ED +TA+RE EE GI++ +++ ++ N A K+ +Y +
Sbjct: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAE 97
Query: 60 LKPYSFTINFCQEECLRCEWMDLND 84
+K Y I E W+ L +
Sbjct: 98 VKDYDVEIRLSHEH-QAYRWLGLEE 121
>gi|4502125 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFG--KSDMYIICR 59
W P G EP ED +TA+RE EE GI++ +++ ++ N A K+ +Y +
Sbjct: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAE 97
Query: 60 LKPYSFTINFCQEECLRCEWMDLND 84
+K Y I E W+ L +
Sbjct: 98 VKDYDVEIRLSHEH-QAYRWLGLEE 121
>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
motif 18 [Homo sapiens]
Length = 323
Score = 34.3 bits (77), Expect = 0.038
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQ 42
W P G EP E I + REV EE G+ E ++LS+ ++
Sbjct: 71 WYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEER 111
>gi|31542498 DCP2 decapping enzyme [Homo sapiens]
Length = 420
Score = 33.1 bits (74), Expect = 0.086
Identities = 16/27 (59%), Positives = 16/27 (59%)
Query: 2 WKFPGGLSEPEEDIGDTAVREVFEETG 28
W FP G EE D A REVFEETG
Sbjct: 124 WGFPKGKVNKEEAPHDCAAREVFEETG 150
>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
Length = 328
Score = 31.2 bits (69), Expect = 0.33
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 1 MWKFPGGLSEPEEDIGDTAVREVFEETGI 29
+W PGG E EE++ D +RE++EE+G+
Sbjct: 121 LWVPPGGHVELEEELLDGGLRELWEESGL 149
>gi|188536065 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 0.55
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 80 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 138
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 139 NYKTMKGID 147
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|188536063 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 0.55
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 80 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 138
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 139 NYKTMKGID 147
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|48375178 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 0.55
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 80 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 138
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 139 NYKTMKGID 147
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|48375176 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 0.55
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 80 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 138
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 139 NYKTMKGID 147
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|48375180 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 0.55
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 80 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 138
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 139 NYKTMKGID 147
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|32469515 nudix-type motif 8 [Homo sapiens]
Length = 140
Score = 28.5 bits (62), Expect = 2.1
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 FPGGLSEP-EEDIGDTAVREVFEETGI 29
FPGG +P ++D+ TA+RE EE G+
Sbjct: 66 FPGGKCDPADQDVVHTALRETREELGL 92
>gi|13899267 nudix-type motif 12 [Homo sapiens]
Length = 462
Score = 27.3 bits (59), Expect = 4.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 7 GLSEPEEDIGDTAVREVFEETGIK 30
G EP E I D REV EE+G+K
Sbjct: 355 GFIEPGETIEDAVRREVEEESGVK 378
>gi|37594464 nudix-type motif 5 [Homo sapiens]
Length = 219
Score = 26.9 bits (58), Expect = 6.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 3 KFPGGLSEPEEDIGDTAVREVFEETGIKSE 32
+FP GL + E A+RE+ EETG K +
Sbjct: 93 EFPAGLIDDGETPEAAALRELEEETGYKGD 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,012,776
Number of Sequences: 37866
Number of extensions: 235742
Number of successful extensions: 427
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 412
Number of HSP's gapped (non-prelim): 21
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.