Guide to the Human Genome
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Name: STX2 Sequence: fasta or formatted (287aa) NCBI GI: 37577287
Description:

syntaxin 2 isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [288aa] syntaxin 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         15           1
 C cysteine            0.7          2           1
 D aspartate           7.0         20           2
 E glutamate          11.1         32           2
 F phenylalanine       3.5         10           2
 G glycine             2.8          8           1
 H histidine           2.4          7           1
 I isoleucine         10.1         29           3
 K lysine              8.4         24           2
 L leucine             7.3         21           2
 M methionine          4.2         12           1
 N asparagine          4.5         13           2
 P proline             1.4          4           1
 Q glutamine           4.2         12           1
 R arginine            7.3         21           2
 S serine              6.3         18           1
 T threonine           6.6         19           3
 V valine              5.6         16           4
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   syntaxin 2 isoform 1 
STX2                  0.942   syntaxin 2 isoform 2 
STX1B                 0.650   syntaxin 1B 
STX1A                 0.642   syntaxin 1A (brain) 
STX3                  0.599   syntaxin 3 
STX4                  0.397   syntaxin 4 
STX11                 0.271   syntaxin 11 
STX19                 0.217   syntaxin 19 
STX7                  0.139   syntaxin 7 
STX12                 0.134   syntaxin 12 
STX16                 0.087   syntaxin 16 isoform a 
STX16                 0.087   syntaxin 16 isoform d 
STX16                 0.087   syntaxin 16 isoform c 
STX16                 0.087   syntaxin 16 isoform b 
TSNARE1               0.062   t-SNARE domain containing 1 
STX5                  0.051   syntaxin 5 
MYH11                 0.045   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.045   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.045   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.045   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
UACA                  0.045   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.045   uveal autoantigen with coiled-coil domains and ankyr...
GCC2                  0.038   GRIP and coiled-coil domain-containing 2 
PMFBP1                0.036   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.036   polyamine modulated factor 1 binding protein 1 isof...
AKAP9                 0.036   A-kinase anchor protein 9 isoform 3 
FILIP1                0.036   filamin A interacting protein 1 
GOLGA4                0.034   golgi autoantigen, golgin subfamily a, 4 
GOLGB1                0.034   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH10                 0.032   myosin, heavy polypeptide 10, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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