Guide to the Human Genome
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Name: GPR78 Sequence: fasta or formatted (363aa) NCBI GI: 36951034
Description:

G protein-coupled receptor 78

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2         48           2
 C cysteine            3.3         12           2
 D aspartate           2.8         10           1
 E glutamate           1.7          6           1
 F phenylalanine       3.9         14           1
 G glycine             6.3         23           1
 H histidine           3.0         11           1
 I isoleucine          1.9          7           1
 K lysine              1.9          7           1
 L leucine            16.8         61           3
 M methionine          2.5          9           1
 N asparagine          1.7          6           1
 P proline             5.5         20           2
 Q glutamine           3.6         13           2
 R arginine            8.5         31           3
 S serine              7.2         26           2
 T threonine           5.8         21           1
 V valine              7.4         27           1
 W tryptophan          1.1          4           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 78 
GPR26                 0.439   G protein-coupled receptor 26 
HTR6                  0.089   5-hydroxytryptamine (serotonin) receptor 6 
SSTR4                 0.085   somatostatin receptor 4 
HTR4                  0.081   serotonin 5-HT4 receptor isoform n 
HTR4                  0.081   serotonin 5-HT4 receptor isoform i 
HTR4                  0.081   serotonin 5-HT4 receptor isoform d 
HTR4                  0.081   serotonin 5-HT4 receptor isoform a 
HTR4                  0.081   serotonin 5-HT4 receptor isoform g 
HTR4                  0.081   serotonin 5-HT4 receptor isoform b 
HTR4                  0.079   serotonin 5-HT4 receptor isoform hb 
SSTR1                 0.079   somatostatin receptor 1 
DRD5                  0.079   dopamine receptor D5 
SSTR5                 0.078   somatostatin receptor 5 
SSTR2                 0.075   somatostatin receptor 2 
HRH2                  0.075   histamine receptor H2 isoform 1 
HRH2                  0.075   histamine receptor H2 isoform 2 
GALR2                 0.075   galanin receptor 2 
HCRTR1                0.075   orexin receptor 1 
ADRB3                 0.075   adrenergic, beta-3-, receptor 
HTR5A                 0.073   5-hydroxytryptamine receptor 5A 
DRD1                  0.071   dopamine receptor D1 
HCRTR2                0.068   orexin receptor 2 
HTR7                  0.068   5-hydroxytryptamine receptor 7 isoform b 
HTR7                  0.068   5-hydroxytryptamine receptor 7 isoform d 
HTR7                  0.068   5-hydroxytryptamine receptor 7 isoform a 
SSTR3                 0.063   somatostatin receptor 3 
ADRA1B                0.063   alpha-1B-adrenergic receptor 
TAAR5                 0.063   trace amine associated receptor 5 
OPRM1                 0.062   opioid receptor, mu 1 isoform MOR-1X 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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