Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FBXO25 Sequence: fasta or formatted (367aa) NCBI GI: 34878769
Description:

F-box only protein 25 isoform 1

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [291aa] F-box only protein 25 isoform 3
alt prot [358aa] F-box only protein 25 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         12           2
 C cysteine            3.3         12           1
 D aspartate           6.3         23           2
 E glutamate           5.2         19           2
 F phenylalanine       5.2         19           1
 G glycine             4.4         16           1
 H histidine           4.6         17           2
 I isoleucine          6.8         25           2
 K lysine              7.6         28           2
 L leucine            12.0         44           2
 M methionine          1.4          5           1
 N asparagine          5.2         19           2
 P proline             2.7         10           1
 Q glutamine           6.0         22           3
 R arginine            4.9         18           2
 S serine              7.1         26           2
 T threonine           4.4         16           1
 V valine              3.3         12           2
 W tryptophan          3.0         11           1
 Y tyrosine            3.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box only protein 25 isoform 1 
FBXO25                0.965   F-box only protein 25 isoform 2 
FBXO25                0.687   F-box only protein 25 isoform 3 
FBXO32                0.566   F-box only protein 32 isoform 1 
FBXO32                0.320   F-box only protein 32 isoform 2 
CLK1                  0.011   CDC-like kinase 1 isoform 2 
CLK1                  0.011   CDC-like kinase 1 isoform 1 
ZCCHC4                0.008   zinc finger, CCHC domain containing 4 
FBXW8                 0.007   F-box and WD repeat domain containing 8 isoform 1 [H...
FBXW8                 0.007   F-box and WD repeat domain containing 8 isoform 2 [H...
LRRC6                 0.007   leucine rich repeat containing 6 
FAM161A               0.007   hypothetical protein LOC84140 
ZBTB1                 0.005   zinc finger and BTB domain containing 1 isoform 1 [...
ZBTB1                 0.005   zinc finger and BTB domain containing 1 isoform 2 [...
MPP7                  0.005   palmitoylated membrane protein 7 
PTPRB                 0.005   protein tyrosine phosphatase, receptor type, B isof...
PTPRB                 0.005   protein tyrosine phosphatase, receptor type, B isof...
LOC652147             0.005   PREDICTED: similar to U5 snRNP-specific 200kD prote...
MYO18A                0.005   myosin 18A isoform b 
MYO18A                0.005   myosin 18A isoform a 
SBF1                  0.004   SET binding factor 1 
RANBP9                0.004   RAN binding protein 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press