Guide to the Human Genome
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Search of human proteins with 34335210

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|34335210 cAMP responsive element modulator isoform m [Homo
sapiens]
         (245 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34335210 cAMP responsive element modulator isoform m [Homo sa...   477   e-135
gi|34335186 cAMP responsive element modulator isoform a [Homo sa...   475   e-134
gi|34335214 cAMP responsive element modulator isoform o [Homo sa...   475   e-134
gi|34335222 cAMP responsive element modulator isoform u [Homo sa...   447   e-126
gi|4758054 cAMP responsive element binding protein 1 isoform A [...   312   2e-85
gi|19745184 cAMP responsive element binding protein 1 isoform B ...   312   2e-85
gi|34335212 cAMP responsive element modulator isoform n [Homo sa...   261   3e-70
gi|34335228 cAMP responsive element modulator isoform v [Homo sa...   259   1e-69
gi|34335216 cAMP responsive element modulator isoform p [Homo sa...   259   1e-69
gi|4885073 activating transcription factor 1 [Homo sapiens]           247   6e-66
gi|34335226 cAMP responsive element modulator isoform s [Homo sa...   232   3e-61
gi|34335224 cAMP responsive element modulator isoform t [Homo sa...   231   4e-61
gi|34335202 cAMP responsive element modulator isoform k [Homo sa...   201   5e-52
gi|34335192 cAMP responsive element modulator isoform f [Homo sa...   201   6e-52
gi|34335190 cAMP responsive element modulator isoform e [Homo sa...   201   6e-52
gi|34335204 cAMP responsive element modulator isoform l [Homo sa...   191   5e-49
gi|34335218 cAMP responsive element modulator isoform q [Homo sa...   191   5e-49
gi|34335196 cAMP responsive element modulator isoform h [Homo sa...   172   2e-43
gi|34335200 cAMP responsive element modulator isoform j [Homo sa...   172   2e-43
gi|34335194 cAMP responsive element modulator isoform g [Homo sa...   172   2e-43
gi|34335188 cAMP responsive element modulator isoform d [Homo sa...   172   2e-43
gi|34335198 cAMP responsive element modulator isoform i [Homo sa...   162   2e-40
gi|34335220 cAMP responsive element modulator isoform r [Homo sa...   162   2e-40
gi|34335206 cAMP responsive element modulator isoform b [Homo sa...   157   8e-39
gi|16418355 cAMP responsive element binding protein 3-like 1 [Ho...    55   6e-08
gi|18702325 cAMP responsive element binding protein 3-like 4 [Ho...    54   9e-08
gi|209954788 activating transcription factor 6 beta isoform b [H...    54   1e-07
gi|20631977 activating transcription factor 6 beta isoform a [Ho...    54   1e-07
gi|14211949 cAMP responsive element binding protein 3-like 3 [Ho...    51   8e-07
gi|56786157 activating transcription factor 6 [Homo sapiens]           50   2e-06

>gi|34335210 cAMP responsive element modulator isoform m [Homo
           sapiens]
          Length = 245

 Score =  477 bits (1228), Expect = e-135
 Identities = 245/245 (100%), Positives = 245/245 (100%)

Query: 1   MVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
           MVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT
Sbjct: 1   MVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60

Query: 61  PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 120
           PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI
Sbjct: 61  PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 120

Query: 121 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ 180
           VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ
Sbjct: 121 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ 180

Query: 181 LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS 240
           LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS
Sbjct: 181 LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS 240

Query: 241 PKTDY 245
           PKTDY
Sbjct: 241 PKTDY 245


>gi|34335186 cAMP responsive element modulator isoform a [Homo
           sapiens]
          Length = 300

 Score =  475 bits (1223), Expect = e-134
 Identities = 244/244 (100%), Positives = 244/244 (100%)

Query: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP
Sbjct: 57  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 116

Query: 62  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 121
           PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV
Sbjct: 117 PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 176

Query: 122 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 181
           QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL
Sbjct: 177 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 236

Query: 182 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 241
           AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP
Sbjct: 237 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 296

Query: 242 KTDY 245
           KTDY
Sbjct: 297 KTDY 300


>gi|34335214 cAMP responsive element modulator isoform o [Homo
           sapiens]
          Length = 270

 Score =  475 bits (1223), Expect = e-134
 Identities = 244/244 (100%), Positives = 244/244 (100%)

Query: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP
Sbjct: 27  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 86

Query: 62  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 121
           PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV
Sbjct: 87  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 146

Query: 122 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 181
           QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL
Sbjct: 147 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 206

Query: 182 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 241
           AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP
Sbjct: 207 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 266

Query: 242 KTDY 245
           KTDY
Sbjct: 267 KTDY 270


>gi|34335222 cAMP responsive element modulator isoform u [Homo
           sapiens]
          Length = 299

 Score =  447 bits (1149), Expect = e-126
 Identities = 230/243 (94%), Positives = 236/243 (97%)

Query: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP
Sbjct: 57  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 116

Query: 62  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 121
           PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV
Sbjct: 117 PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 176

Query: 122 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 181
           QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL
Sbjct: 177 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 236

Query: 182 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 241
           AEEATRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   
Sbjct: 237 AEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCH 296

Query: 242 KTD 244
           K +
Sbjct: 297 KVE 299


>gi|4758054 cAMP responsive element binding protein 1 isoform A
           [Homo sapiens]
          Length = 327

 Score =  312 bits (799), Expect = 2e-85
 Identities = 168/245 (68%), Positives = 200/245 (81%), Gaps = 7/245 (2%)

Query: 2   VAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
           ++ IAE+++S ES + V DS KRREILSRRPSYRKILN+LSSD PGVP+IEEE+SEEE +
Sbjct: 88  ISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETS 147

Query: 61  PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 120
            P+I T+ VPT IYQTS+GQYIAI QGG IQ++N G+DGVQGLQ LTMTN+ A  PG TI
Sbjct: 148 APAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTI 207

Query: 121 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQ 179
           +QY AQ+ DG QQ  VP +QVVVQAA+GD+ TYQIR APT+ +  GVVMA+SP     P 
Sbjct: 208 LQY-AQTTDG-QQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPA---LPT 262

Query: 180 QLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDIC 239
           Q AEEA RKRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+ 
Sbjct: 263 QPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLY 322

Query: 240 SPKTD 244
             K+D
Sbjct: 323 CHKSD 327



 Score = 27.7 bits (60), Expect = 9.5
 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 19/110 (17%)

Query: 124 AAQSADGTQQFFVPGSQVVVQAATGDMPTYQIR--APTAALPQ----------GVVMAAS 171
           AA +    QQ  V     +   A   MP       APT  L Q          GV+ AA 
Sbjct: 15  AAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPNGQTVQVHGVIQAAQ 74

Query: 172 PGSLHSPQ-------QLAEEATRKRELRLMKNREAAKECRRRKKEYVKCL 214
           P  + SPQ        +AE    +  +  + + +  +E   R+  Y K L
Sbjct: 75  PSVIQSPQVQTVQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKIL 124


>gi|19745184 cAMP responsive element binding protein 1 isoform B
           [Homo sapiens]
          Length = 341

 Score =  312 bits (799), Expect = 2e-85
 Identities = 168/245 (68%), Positives = 200/245 (81%), Gaps = 7/245 (2%)

Query: 2   VAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
           ++ IAE+++S ES + V DS KRREILSRRPSYRKILN+LSSD PGVP+IEEE+SEEE +
Sbjct: 102 ISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETS 161

Query: 61  PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 120
            P+I T+ VPT IYQTS+GQYIAI QGG IQ++N G+DGVQGLQ LTMTN+ A  PG TI
Sbjct: 162 APAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTI 221

Query: 121 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQ 179
           +QY AQ+ DG QQ  VP +QVVVQAA+GD+ TYQIR APT+ +  GVVMA+SP     P 
Sbjct: 222 LQY-AQTTDG-QQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPA---LPT 276

Query: 180 QLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDIC 239
           Q AEEA RKRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+ 
Sbjct: 277 QPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLY 336

Query: 240 SPKTD 244
             K+D
Sbjct: 337 CHKSD 341


>gi|34335212 cAMP responsive element modulator isoform n [Homo
           sapiens]
          Length = 182

 Score =  261 bits (668), Expect = 3e-70
 Identities = 154/245 (62%), Positives = 159/245 (64%), Gaps = 63/245 (25%)

Query: 1   MVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
           MVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP               
Sbjct: 1   MVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP--------------- 45

Query: 61  PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 120
                                                 GV  ++       G PP  AT+
Sbjct: 46  --------------------------------------GVPKIEEERSEEEGTPPSIATM 67

Query: 121 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ 180
               +     T Q+           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ
Sbjct: 68  AVPTSIYQTSTGQY----------TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ 117

Query: 181 LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS 240
           LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS
Sbjct: 118 LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS 177

Query: 241 PKTDY 245
           PKTDY
Sbjct: 178 PKTDY 182


>gi|34335228 cAMP responsive element modulator isoform v [Homo
           sapiens]
          Length = 221

 Score =  259 bits (663), Expect = 1e-69
 Identities = 153/244 (62%), Positives = 158/244 (64%), Gaps = 63/244 (25%)

Query: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP                
Sbjct: 41  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP---------------- 84

Query: 62  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 121
                                                GV  ++       G PP  AT+ 
Sbjct: 85  -------------------------------------GVPKIEEERSEEEGTPPSIATMA 107

Query: 122 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 181
              +     T Q+           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL
Sbjct: 108 VPTSIYQTSTGQY----------TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 157

Query: 182 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 241
           AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP
Sbjct: 158 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 217

Query: 242 KTDY 245
           KTDY
Sbjct: 218 KTDY 221


>gi|34335216 cAMP responsive element modulator isoform p [Homo
           sapiens]
          Length = 207

 Score =  259 bits (663), Expect = 1e-69
 Identities = 153/244 (62%), Positives = 158/244 (64%), Gaps = 63/244 (25%)

Query: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP                
Sbjct: 27  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP---------------- 70

Query: 62  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 121
                                                GV  ++       G PP  AT+ 
Sbjct: 71  -------------------------------------GVPKIEEERSEEEGTPPSIATMA 93

Query: 122 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 181
              +     T Q+           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL
Sbjct: 94  VPTSIYQTSTGQY----------TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 143

Query: 182 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 241
           AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP
Sbjct: 144 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 203

Query: 242 KTDY 245
           KTDY
Sbjct: 204 KTDY 207


>gi|4885073 activating transcription factor 1 [Homo sapiens]
          Length = 271

 Score =  247 bits (631), Expect = 6e-66
 Identities = 143/245 (58%), Positives = 181/245 (73%), Gaps = 9/245 (3%)

Query: 2   VAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
           V++++E++ES +S   I  S K   IL+RRPSYRKIL +LSS+     K + E S   G 
Sbjct: 32  VSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---GV 88

Query: 61  PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 120
             ++ +M+VPT IYQTS+GQYIAIA  G +Q+++PG+DGVQGLQ LTMTNSG+   G TI
Sbjct: 89  SAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTTI 148

Query: 121 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSP 178
           +QYA Q++DG QQ  VP +QVVVQ A+GDM TYQIR   +A  LPQ VVM  SP +L S 
Sbjct: 149 LQYA-QTSDG-QQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQ 205

Query: 179 QQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDI 238
               ++   KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD+
Sbjct: 206 TTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDL 265

Query: 239 CSPKT 243
            S K+
Sbjct: 266 YSNKS 270


>gi|34335226 cAMP responsive element modulator isoform s [Homo
           sapiens]
          Length = 248

 Score =  232 bits (591), Expect = 3e-61
 Identities = 140/245 (57%), Positives = 154/245 (62%), Gaps = 55/245 (22%)

Query: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP                
Sbjct: 57  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP---------------- 100

Query: 62  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 121
                                                GV  ++       G PP  AT+ 
Sbjct: 101 -------------------------------------GVPKIEEERSEEEGTPPSIATMA 123

Query: 122 QYAA--QSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQ 179
              +  Q++ G        +   + AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQ
Sbjct: 124 VPTSIYQTSTGQYNEETELAPSHMAAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQ 183

Query: 180 QLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDIC 239
           QLAEEATRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+ 
Sbjct: 184 QLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLY 243

Query: 240 SPKTD 244
             K +
Sbjct: 244 CHKVE 248


>gi|34335224 cAMP responsive element modulator isoform t [Homo
           sapiens]
          Length = 236

 Score =  231 bits (589), Expect = 4e-61
 Identities = 139/243 (57%), Positives = 150/243 (61%), Gaps = 63/243 (25%)

Query: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP                
Sbjct: 57  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVP---------------- 100

Query: 62  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 121
                                                GV  ++       G PP  AT+ 
Sbjct: 101 -------------------------------------GVPKIEEERSEEEGTPPSIATMA 123

Query: 122 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 181
              +     T Q+           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL
Sbjct: 124 VPTSIYQTSTGQY----------TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 173

Query: 182 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 241
           AEEATRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   
Sbjct: 174 AEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCH 233

Query: 242 KTD 244
           K +
Sbjct: 234 KVE 236


>gi|34335202 cAMP responsive element modulator isoform k [Homo
           sapiens]
          Length = 113

 Score =  201 bits (511), Expect = 5e-52
 Identities = 101/103 (98%), Positives = 102/103 (99%)

Query: 143 VQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKE 202
           + AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKE
Sbjct: 11  LSAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKE 70

Query: 203 CRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 245
           CRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 71  CRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 113


>gi|34335192 cAMP responsive element modulator isoform f [Homo
           sapiens]
          Length = 121

 Score =  201 bits (510), Expect = 6e-52
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 145 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 204
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR
Sbjct: 21  AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 80

Query: 205 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 245
           RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 81  RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 121


>gi|34335190 cAMP responsive element modulator isoform e [Homo
           sapiens]
          Length = 109

 Score =  201 bits (510), Expect = 6e-52
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 145 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 204
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR
Sbjct: 9   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 68

Query: 205 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 245
           RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 69  RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 109


>gi|34335204 cAMP responsive element modulator isoform l [Homo
           sapiens]
          Length = 96

 Score =  191 bits (485), Expect = 5e-49
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 150 MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 209
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 60

Query: 210 YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 245
           YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 61  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 96


>gi|34335218 cAMP responsive element modulator isoform q [Homo
           sapiens]
          Length = 96

 Score =  191 bits (485), Expect = 5e-49
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 150 MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 209
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 60

Query: 210 YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 245
           YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY
Sbjct: 61  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY 96


>gi|34335196 cAMP responsive element modulator isoform h [Homo
           sapiens]
          Length = 112

 Score =  172 bits (437), Expect = 2e-43
 Identities = 87/102 (85%), Positives = 94/102 (92%)

Query: 143 VQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKE 202
           + AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+E
Sbjct: 11  LSAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARE 70

Query: 203 CRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 244
           CRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 71  CRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 112


>gi|34335200 cAMP responsive element modulator isoform j [Homo
           sapiens]
          Length = 102

 Score =  172 bits (436), Expect = 2e-43
 Identities = 87/100 (87%), Positives = 93/100 (93%)

Query: 145 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 204
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECR
Sbjct: 3   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECR 62

Query: 205 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 244
           R+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 63  RKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 102


>gi|34335194 cAMP responsive element modulator isoform g [Homo
           sapiens]
          Length = 108

 Score =  172 bits (436), Expect = 2e-43
 Identities = 87/100 (87%), Positives = 93/100 (93%)

Query: 145 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 204
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECR
Sbjct: 9   AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECR 68

Query: 205 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 244
           R+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 69  RKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 108


>gi|34335188 cAMP responsive element modulator isoform d [Homo
           sapiens]
          Length = 120

 Score =  172 bits (436), Expect = 2e-43
 Identities = 87/100 (87%), Positives = 93/100 (93%)

Query: 145 AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 204
           AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECR
Sbjct: 21  AATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECR 80

Query: 205 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 244
           R+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 81  RKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 120


>gi|34335198 cAMP responsive element modulator isoform i [Homo
           sapiens]
          Length = 95

 Score =  162 bits (411), Expect = 2e-40
 Identities = 82/95 (86%), Positives = 88/95 (92%)

Query: 150 MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 209
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECRR+KKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 60

Query: 210 YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 244
           YVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 61  YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 95


>gi|34335220 cAMP responsive element modulator isoform r [Homo
           sapiens]
          Length = 95

 Score =  162 bits (411), Expect = 2e-40
 Identities = 82/95 (86%), Positives = 88/95 (92%)

Query: 150 MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 209
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECRR+KKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 60

Query: 210 YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 244
           YVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 61  YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 95


>gi|34335206 cAMP responsive element modulator isoform b [Homo
           sapiens]
          Length = 137

 Score =  157 bits (397), Expect = 8e-39
 Identities = 80/80 (100%), Positives = 80/80 (100%)

Query: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP
Sbjct: 41  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 100

Query: 62  PSIATMAVPTSIYQTSTGQY 81
           PSIATMAVPTSIYQTSTGQY
Sbjct: 101 PSIATMAVPTSIYQTSTGQY 120


>gi|16418355 cAMP responsive element binding protein 3-like 1 [Homo
           sapiens]
          Length = 519

 Score = 55.1 bits (131), Expect = 6e-08
 Identities = 27/60 (45%), Positives = 41/60 (68%)

Query: 178 PQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKD 237
           P   AEE   KR  R +KN+ +A+E RR+KKEYV+CLE +V     +N +L +++ETL++
Sbjct: 282 PLTKAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLEN 341


>gi|18702325 cAMP responsive element binding protein 3-like 4 [Homo
           sapiens]
          Length = 395

 Score = 54.3 bits (129), Expect = 9e-08
 Identities = 26/61 (42%), Positives = 42/61 (68%)

Query: 176 HSPQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETL 235
           H P   AEE   K+  R ++N+++A++ RRRKKEY+  LESRVA    QN++L ++++ L
Sbjct: 207 HLPLTKAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQEL 266

Query: 236 K 236
           +
Sbjct: 267 E 267


>gi|209954788 activating transcription factor 6 beta isoform b [Homo
           sapiens]
          Length = 700

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 36/171 (21%)

Query: 88  GTIQIS-NPGSDGVQG----------------LQALTMTNSGAPPPGATIVQYAAQSADG 130
           G +QIS  P  DG  G                L  + M +   PP    ++Q   Q    
Sbjct: 216 GAVQISMGPSLDGSSGKALPTRKPPLQPKPVVLTTVPMPSRAVPPSTTVLLQSLVQPP-- 273

Query: 131 TQQFFVPGSQVV-VQAATGDMPTYQIRAPTAALPQ----GVVMAASPGSLHSPQQLAEEA 185
                 P S VV +Q A    P      P  +LP+     +V A  PG+   P+   +  
Sbjct: 274 ------PVSPVVLIQGAIRVQP----EGPAPSLPRPERKSIVPAPMPGNSCPPE--VDAK 321

Query: 186 TRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLK 236
             KR+ R++KNRE+A + RR+KKEY++ LE+R+  +   N++L  E   L+
Sbjct: 322 LLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALR 372


>gi|20631977 activating transcription factor 6 beta isoform a [Homo
           sapiens]
          Length = 703

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 36/171 (21%)

Query: 88  GTIQIS-NPGSDGVQG----------------LQALTMTNSGAPPPGATIVQYAAQSADG 130
           G +QIS  P  DG  G                L  + M +   PP    ++Q   Q    
Sbjct: 219 GAVQISMGPSLDGSSGKALPTRKPPLQPKPVVLTTVPMPSRAVPPSTTVLLQSLVQPP-- 276

Query: 131 TQQFFVPGSQVV-VQAATGDMPTYQIRAPTAALPQ----GVVMAASPGSLHSPQQLAEEA 185
                 P S VV +Q A    P      P  +LP+     +V A  PG+   P+   +  
Sbjct: 277 ------PVSPVVLIQGAIRVQP----EGPAPSLPRPERKSIVPAPMPGNSCPPE--VDAK 324

Query: 186 TRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLK 236
             KR+ R++KNRE+A + RR+KKEY++ LE+R+  +   N++L  E   L+
Sbjct: 325 LLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALR 375


>gi|14211949 cAMP responsive element binding protein 3-like 3 [Homo
           sapiens]
          Length = 461

 Score = 51.2 bits (121), Expect = 8e-07
 Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 31/224 (13%)

Query: 51  EEERSEEEGTPPSIATMAVPTSIY--QTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTM 108
           E+  S+ + TPP       P   +  Q   G  ++   G +   + PG        ++T+
Sbjct: 91  EDLPSDPQDTPPRSGPATSPAGCHPAQPGKGPCLSYHPGNSCSTTTPGPVIQVPEASVTI 150

Query: 109 TNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRA-----PTAALP 163
                 P G    +  A   D + +  +    +++  ++GD+  + + A     P A   
Sbjct: 151 DLEMWSPGGRICAEKPADPVDLSPRCNLTVKDLLLSGSSGDLQQHHLGASYLLRPGAGHC 210

Query: 164 QGVVMAASPGSLHS------PQQLA----EEATRKRELRLMKNREAAKECRRRKKEYVKC 213
           Q +V+      L +      P QL     EE   K+  R ++N+++A+E R++KKEY+  
Sbjct: 211 QELVLTEDEKKLLAKEGITLPTQLPLTKYEERVLKKIRRKIRNKQSAQESRKKKKEYIDG 270

Query: 214 LESRVAV--------------LEVQNKKLIEELETLKDICSPKT 243
           LE+R++               LE QN  L+E+L+ L+ I    T
Sbjct: 271 LETRMSACTAQNQELQRKVLHLEKQNLSLLEQLKKLQAIVVQST 314


>gi|56786157 activating transcription factor 6 [Homo sapiens]
          Length = 670

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 7/131 (5%)

Query: 113 APPPGATIVQYAAQSADGTQQFFVPGSQVVVQAATG--DMPTYQIR---APTAALPQGVV 167
           AP  G T++              +P +Q V+  A G   +P + +    AP+A  P    
Sbjct: 226 APTKGQTVLLSQPTVVQLQAPGVLPSAQPVLAVAGGVTQLPNHVVNVVPAPSANSPVNGK 285

Query: 168 MAASPGSLHSPQQL--AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQN 225
           ++ +   L S  +   ++ A  +R+ R++KNRE+A + R++KKEY+  LE+R+     +N
Sbjct: 286 LSVTKPVLQSTMRNVGSDIAVLRRQQRMIKNRESACQSRKKKKEYMLGLEARLKAALSEN 345

Query: 226 KKLIEELETLK 236
           ++L +E  TLK
Sbjct: 346 EQLKKENGTLK 356


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.126    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,008,624
Number of Sequences: 37866
Number of extensions: 472088
Number of successful extensions: 2411
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 2201
Number of HSP's gapped (non-prelim): 291
length of query: 245
length of database: 18,247,518
effective HSP length: 100
effective length of query: 145
effective length of database: 14,460,918
effective search space: 2096833110
effective search space used: 2096833110
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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