Guide to the Human Genome
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Name: FAIM2 Sequence: fasta or formatted (316aa) NCBI GI: 34101290
Description:

Fas apoptotic inhibitory molecule 2

Referenced in:

Glutamate
TNF and Related Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         27           2
 C cysteine            1.9          6           2
 D aspartate           3.2         10           2
 E glutamate           3.2         10           2
 F phenylalanine       8.2         26           2
 G glycine             6.3         20           1
 H histidine           1.9          6           1
 I isoleucine          3.5         11           2
 K lysine              2.8          9           2
 L leucine            13.3         42           2
 M methionine          1.9          6           1
 N asparagine          2.5          8           1
 P proline             6.0         19           2
 Q glutamine           3.8         12           3
 R arginine            2.5          8           2
 S serine              7.3         23           5
 T threonine           8.2         26           2
 V valine              7.9         25           2
 W tryptophan          1.9          6           1
 Y tyrosine            5.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fas apoptotic inhibitory molecule 2 
TMBIM1                0.434   transmembrane BAX inhibitor motif containing 1 [Homo...
GRINA                 0.355   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.355   glutamate receptor, ionotropic, N-methyl D-aspartate...
TMBIM4                0.137   transmembrane BAX inhibitor motif containing 4 [Hom...
TMBIM6                0.018   testis enhanced gene transcript (BAX inhibitor 1) i...
TMBIM6                0.018   testis enhanced gene transcript (BAX inhibitor 1) i...
MUC7                  0.015   mucin 7, secreted precursor 
MUC7                  0.015   mucin 7, secreted precursor 
MUC7                  0.015   mucin 7, secreted precursor 
YIF1A                 0.015   Yip1 interacting factor homolog 
SLC6A4                0.013   solute carrier family 6 member 4 
LOC100292157          0.013   PREDICTED: hypothetical protein 
LOC100290926          0.013   PREDICTED: hypothetical protein XP_002347568 
LOC100288995          0.013   PREDICTED: hypothetical protein XP_002343379 
CSPG5                 0.011   chondroitin sulfate proteoglycan 5 (neuroglycan C) ...
ZMYM3                 0.011   zinc finger protein 261 
ZMYM3                 0.011   zinc finger protein 261 
SHANK1                0.011   SH3 and multiple ankyrin repeat domains 1 
SLC6A11               0.010   solute carrier family 6 (neurotransmitter transporter...
UNC93A                0.010   unc-93 homolog A isoform 1 
TACC2                 0.010   transforming, acidic coiled-coil containing protein...
OTUD7A                0.010   OTU domain containing 7A 
LOC649201             0.010   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649201             0.010   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649201             0.010   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC100287812          0.010   PREDICTED: hypothetical protein XP_002343253 
COL14A1               0.010   collagen, type XIV, alpha 1 
MAP1A                 0.008   microtubule-associated protein 1A 
OR10AG1               0.008   olfactory receptor, family 10, subfamily AG, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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