Guide to the Human Genome
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Name: PRELID2 Sequence: fasta or formatted (189aa) NCBI GI: 33667079
Description:

PRELI domain containing 2 isoform a

Referenced in:

Mitochondria

Other entries for this name:
alt prot [148aa] PRELI domain containing 2 isoform c
alt prot [177aa] PRELI domain containing 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2          8           1
 C cysteine            2.6          5           1
 D aspartate           1.6          3           1
 E glutamate           9.5         18           3
 F phenylalanine       3.7          7           1
 G glycine             4.2          8           1
 H histidine           1.1          2           1
 I isoleucine          7.9         15           1
 K lysine              6.9         13           2
 L leucine             7.9         15           2
 M methionine          4.2          8           1
 N asparagine          4.8          9           1
 P proline             4.2          8           1
 Q glutamine           4.8          9           1
 R arginine            6.9         13           1
 S serine              7.4         14           1
 T threonine           4.2          8           1
 V valine              9.0         17           2
 W tryptophan          2.1          4           1
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PRELI domain containing 2 isoform a 
PRELID2               0.907   PRELI domain containing 2 isoform b 
PRELID2               0.739   PRELI domain containing 2 isoform c 
SLMO1                 0.132   slowmo homolog 1 isoform 1 
SLMO1                 0.132   slowmo homolog 1 isoform 1 
SLMO2                 0.118   slowmo homolog 2 
SEC14L5               0.087   SEC14-like 5 
SEC14L1               0.084   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.084   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.084   SEC14 (S. cerevisiae)-like 1 isoform b 
SEC14L1               0.084   SEC14 (S. cerevisiae)-like 1 isoform a 
PRELID1               0.048   PRELI domain containing 1 
SEC14L1               0.034   SEC14 (S. cerevisiae)-like 1 isoform c 
MTIF2                 0.014   mitochondrial translational initiation factor 2 prec...
MTIF2                 0.014   mitochondrial translational initiation factor 2 prec...
KLB                   0.008   klotho beta 
TRPM5                 0.006   transient receptor potential cation channel, subfami...
MTA3                  0.006   metastasis associated 1 family, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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