Search of human proteins with 33356541

Search of human proteins with 33356541

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33356541 phospholipid transfer protein isoform b precursor
[Homo sapiens]
         (441 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33356541 phospholipid transfer protein isoform b precursor [H...   860   0.0  
gi|5453914 phospholipid transfer protein isoform a precursor [Ho...   835   0.0  
gi|157276599 bactericidal/permeability-increasing protein precur...   138   1e-32
gi|28372551 bactericidal/permeability-increasing protein-like 2 ...   119   5e-27
gi|31652249 lipopolysaccharide-binding protein precursor [Homo s...   103   2e-22
gi|169636439 cholesteryl ester transfer protein, plasma precurso...    70   3e-12
gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]                40   0.006
gi|15055535 bactericidal/permeability-increasing protein-like 1 ...    38   0.016
gi|239757484 PREDICTED: similar to bactericidal/permeability-inc...    36   0.061
gi|94400919 WD repeat domain 90 [Homo sapiens]                         32   0.88 
gi|105990532 apolipoprotein B precursor [Homo sapiens]                 31   2.0  
gi|38202211 N-acetylglucosamine-1-phosphate transferase [Homo sa...    31   2.0  
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         30   5.7  
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    29   7.5  

>gi|33356541 phospholipid transfer protein isoform b precursor [Homo
           sapiens]
          Length = 441

 Score =  860 bits (2223), Expect = 0.0
 Identities = 441/441 (100%), Positives = 441/441 (100%)

Query: 1   MALFGALFLALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEGH 60
           MALFGALFLALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEGH
Sbjct: 1   MALFGALFLALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEGH 60

Query: 61  FYYNISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFLKVYDFLSTFI 120
           FYYNISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFLKVYDFLSTFI
Sbjct: 61  FYYNISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFLKVYDFLSTFI 120

Query: 121 TSGMRFLLNQQICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDM 180
           TSGMRFLLNQQICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDM
Sbjct: 121 TSGMRFLLNQQICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDM 180

Query: 181 DFRGAFFPLTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVG 240
           DFRGAFFPLTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVG
Sbjct: 181 DFRGAFFPLTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVG 240

Query: 241 DKVPHDLDMLLRATYFGSIVLLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTI 300
           DKVPHDLDMLLRATYFGSIVLLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTI
Sbjct: 241 DKVPHDLDMLLRATYFGSIVLLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTI 300

Query: 301 ALVPPDQPEVQLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQA 360
           ALVPPDQPEVQLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQA
Sbjct: 301 ALVPPDQPEVQLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQA 360

Query: 361 PLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFAKGLREVI 420
           PLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFAKGLREVI
Sbjct: 361 PLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFAKGLREVI 420

Query: 421 EKNRPADVRASTAPTPSTAAV 441
           EKNRPADVRASTAPTPSTAAV
Sbjct: 421 EKNRPADVRASTAPTPSTAAV 441


>gi|5453914 phospholipid transfer protein isoform a precursor [Homo
           sapiens]
          Length = 493

 Score =  835 bits (2156), Expect = 0.0
 Identities = 440/493 (89%), Positives = 440/493 (89%), Gaps = 52/493 (10%)

Query: 1   MALFGALFLALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEGH 60
           MALFGALFLALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEGH
Sbjct: 1   MALFGALFLALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEGH 60

Query: 61  FYYNISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFL---------- 110
           FYYNISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWF           
Sbjct: 61  FYYNISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFFYDGGYINASA 120

Query: 111 ------------------------------------------KVYDFLSTFITSGMRFLL 128
                                                     KVYDFLSTFITSGMRFLL
Sbjct: 121 EGVSIRTGLELSRDPAGRMKVSNVSCQASVSRMHAAFGGTFKKVYDFLSTFITSGMRFLL 180

Query: 129 NQQICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFP 188
           NQQICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFP
Sbjct: 181 NQQICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFP 240

Query: 189 LTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLD 248
           LTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLD
Sbjct: 241 LTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLD 300

Query: 249 MLLRATYFGSIVLLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTIALVPPDQP 308
           MLLRATYFGSIVLLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTIALVPPDQP
Sbjct: 301 MLLRATYFGSIVLLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTIALVPPDQP 360

Query: 309 EVQLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQI 368
           EVQLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQI
Sbjct: 361 EVQLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQI 420

Query: 369 GVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFAKGLREVIEKNRPADV 428
           GVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFAKGLREVIEKNRPADV
Sbjct: 421 GVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFAKGLREVIEKNRPADV 480

Query: 429 RASTAPTPSTAAV 441
           RASTAPTPSTAAV
Sbjct: 481 RASTAPTPSTAAV 493


>gi|157276599 bactericidal/permeability-increasing protein precursor
           [Homo sapiens]
          Length = 487

 Score =  138 bits (347), Expect = 1e-32
 Identities = 112/455 (24%), Positives = 195/455 (42%), Gaps = 68/455 (14%)

Query: 20  PGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGK-----EGHFYYNISEVKVTELQ 74
           PG  +R++ K L+   Q+G   L++EL+ I IPD          G  +Y+   + + E Q
Sbjct: 34  PGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQ 93

Query: 75  LTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFLKV---YDF------------LSTF 119
           L SS++   P   L   I+NA++ +  + +    FLK+   +D             L + 
Sbjct: 94  LPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSN 153

Query: 120 ITSG---------------------------------------MRFLLNQQICPVLYHAG 140
            TSG                                       +R  +N Q+C  + ++ 
Sbjct: 154 PTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSV 213

Query: 141 TVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPNRA 200
           +  L     T+PV + +D + GI+Y L+  P  +   LD+  +G F+     N   P   
Sbjct: 214 SSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHN---PPPF 270

Query: 201 VEPQLQ---EEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATYFG 257
             P ++     +RMVY+  S++FF++A   Y  AG L++ L  D +P +    L   +FG
Sbjct: 271 APPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFFG 330

Query: 258 SIVLLSPAVIDSPLKLELRVLA--PPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSM 315
           +  L   A     +K+++ V A  PP  +++P+G T      V    V P+     L  +
Sbjct: 331 TF-LPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSLASLFLI 389

Query: 316 TMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLN 375
            M    S +++     L  +L L R  +   HS +    +  LQ  +  ++ I V+P +N
Sbjct: 390 GMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVN 449

Query: 376 ERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADL 410
           E+  +G  +P P  +   + V+  H  FL  GAD+
Sbjct: 450 EKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADV 484


>gi|28372551 bactericidal/permeability-increasing protein-like 2
           [Homo sapiens]
          Length = 507

 Score =  119 bits (298), Expect = 5e-27
 Identities = 110/470 (23%), Positives = 199/470 (42%), Gaps = 71/470 (15%)

Query: 19  FPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEG-------HFYYNISEVKVT 71
           +PG K R+T +AL+   Q G++ +EQ L+   +PDL G E        +  YN S +K++
Sbjct: 27  YPGIKARITQRALDYGVQAGMKMIEQMLKEKKLPDLSGSESLEFLKVDYVNYNFSNIKIS 86

Query: 72  ELQLTSSELDFQPQQELML----QITNASLGLRFRRQLLYWFLKVYDFLSTFITSGMRFL 127
                ++ L F P   +         N S    F   L         FLS    +G+  L
Sbjct: 87  AFSFPNTSLAFVPGVGIKALTNHGTANISTDWGFESPLFQDTGGADLFLSGVYFTGIIIL 146

Query: 128 ---------LNQQIC-PVLYHAG-------TVLLNSLLDTV--PVRSSVDELVG------ 162
                    L  Q C   L HA        +VL NS  + +  P+  +++E++       
Sbjct: 147 TRNDFGHPTLKLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASE 206

Query: 163 ----------------------IDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPNRA 200
                                 +DYSL+  P  + + LD++ +G F+PL   N + P  +
Sbjct: 207 VKALNANLSTLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPL--ENLTDPPFS 264

Query: 201 VEPQL--QEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATYFGS 258
             P +  +    M+Y+  +E+FF SA  ++F AG   + L  +++ +    +  +   G+
Sbjct: 265 PVPFVLPERSNSMLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISN--HFVQNSQGLGN 322

Query: 259 IV--LLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSMT 316
           ++  +    ++  P  + +    PP   ++P   T+ + AS+ +   P +     + SM 
Sbjct: 323 VLSRIAEIYILSQPFMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVSMD 382

Query: 317 MDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLNE 376
             A  S  + + G+ L   L L RFR+    S   ++ ++  +  L ++L  GV+P+ N 
Sbjct: 383 FVASTSVGLVILGQRLVCSLSLNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANA 442

Query: 377 RTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFAKGLREVIEKNRPA 426
           +  +G  +  P    FV+  +    GFL I  DL +     E   K +P+
Sbjct: 443 KLQQGFPLSNPHKFLFVNSDIEVLEGFLLISTDLKY-----ETSSKQQPS 487


>gi|31652249 lipopolysaccharide-binding protein precursor [Homo
           sapiens]
          Length = 481

 Score =  103 bits (258), Expect = 2e-22
 Identities = 103/467 (22%), Positives = 182/467 (38%), Gaps = 58/467 (12%)

Query: 6   ALFLALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRG-----KEGH 60
           AL L     A    PG   R+T K L+   QEGL  L+ EL  IT+PD  G       G 
Sbjct: 14  ALLLTSTPEALGANPGLVARITDKGLQYAAQEGLLALQSELLRITLPDFTGDLRIPHVGR 73

Query: 61  FYYNISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFLKV---YDFLS 117
             Y    + +   +L  S L   P Q L L I+++S+ ++ R ++   F K+   +D   
Sbjct: 74  GRYEFHSLNIHSCELLHSALRPVPGQGLSLSISDSSIRVQGRWKVRKSFFKLQGSFDVSV 133

Query: 118 TFITSGMRFLLNQQ---------------------------------------------- 131
             I+  +  LL  +                                              
Sbjct: 134 KGISISVNLLLGSESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNLFHNQIESKFQKVL 193

Query: 132 ---ICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFP 188
              IC ++  + +  L   L T+PV + +D    IDYSL++ P A+   L++ F+G  F 
Sbjct: 194 ESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKGEIFH 253

Query: 189 LTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLD 248
              R+      AV    +E  +MVY A S++ F++A   Y   G L   +  D +P D +
Sbjct: 254 RNHRSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLNFSITDDMIPPDSN 313

Query: 249 MLLRATYFGSIV-LLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTIALVPPDQ 307
           + L    F   V  L+    +  L+L+  V + P     P   ++     +   ++ P  
Sbjct: 314 IRLTTKSFRPFVPRLARLYPNMNLELQGSVPSAPLLNFSPGNLSVDPYMEIDAFVLLPSS 373

Query: 308 PEVQLSSMTMDARLSAKMALRGKALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQ 367
            +  +  +++   +SA +      +   L   + ++    S +       L+A L   + 
Sbjct: 374 SKEPVFRLSVATNVSATLTFNTSKITGFLKPGKVKVELKESKVGLFNAELLEALLNYYIL 433

Query: 368 IGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHFAK 414
               P  N++   G  +PL + +      +  H  FL +GA++ + +
Sbjct: 434 NTFYPKFNDKLAEGFPLPLLKRVQLYDLGLQIHKDFLFLGANVQYMR 480


>gi|169636439 cholesteryl ester transfer protein, plasma precursor
           [Homo sapiens]
          Length = 493

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 104/498 (20%), Positives = 187/498 (37%), Gaps = 108/498 (21%)

Query: 7   LFLALLAGAHA------EFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKE-- 58
           L LALL  AHA         G   R+T  AL ++  E  + ++   +  + PD+ G++  
Sbjct: 7   LTLALLGNAHACSKGTSHEAGIVCRITKPALLVLNHETAKVIQTAFQRASYPDITGEKAM 66

Query: 59  ---GHFYYNISEVKVTELQLTSSE------------------------------------ 79
              G   Y +  ++++ L + SS+                                    
Sbjct: 67  MLLGQVKYGLHNIQISHLSIASSQVELVEAKSIDVSIQNVSVVFKGTLKYGYTTAWWLGI 126

Query: 80  ---LDFQPQQELMLQITNA-------------SLGLRFRRQLLY--------WFLKVYDF 115
              +DF+    + LQI                   L F + LL+        W  +++  
Sbjct: 127 DQSIDFEIDSAIDLQINTQLTCDSGRVRTDAPDCYLSFHKLLLHLQGEREPGWIKQLF-- 184

Query: 116 LSTFITSGMRFLLNQQICPVLYHAGTVLLNSLLDTVPVRSSV---DELVGIDYSLMKDPV 172
            + FI+  ++ +L  QIC  +     V+ N + D V  R++    D  +G+D SL  DPV
Sbjct: 185 -TNFISFTLKLVLKGQICKEI----NVISNIMADFVQTRAASILSDGDIGVDISLTGDPV 239

Query: 173 ASTSNLDMDFRGAFFPLTERNWSLPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAG 232
            + S L+   +G F      +  LP     P L  + RM+Y  FSE  F S  +  F+ G
Sbjct: 240 ITASYLESHHKGHFI-YKNVSEDLPLPTFSPTLLGDSRMLYFWFSERVFHSLAKVAFQDG 298

Query: 233 ALQLLLVGDKVPHDLDMLLRATYFGSIVLLSPAVI---DSPLKLELRVLAPPRCTIKPSG 289
            L L L+GD    +   +L    F +   +   V+    S  ++ +  L  P+ + +  G
Sbjct: 299 RLMLSLMGD----EFKAVLETWGFNTNQEIFQEVVGGFPSQAQVTVHCLKMPKISCQNKG 354

Query: 290 TTISVTASVTIALVPPDQPEVQLSSMTMDARLSAKMALRGKAL-----------RTQLDL 338
             ++ +  V      PDQ      +   D   + + +   K L           +T  +L
Sbjct: 355 VVVNSSVMVKFLFPRPDQQHSVAYTFEEDIVTTVQASYSKKKLFLSLLDFQITPKTVSNL 414

Query: 339 RRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVT 398
                 S  S L+S+        + + L++    ++N    +GV +      + ++  + 
Sbjct: 415 TESSSESVQSFLQSMITAVGIPEVMSRLEVVFTALMNS---KGVSL-----FDIINPEII 466

Query: 399 NHAGFLTIGADLHFAKGL 416
              GFL +  D  F + L
Sbjct: 467 TRDGFLLLQMDFGFPEHL 484


>gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]
          Length = 614

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 17/182 (9%)

Query: 224 AMESYFRAGALQLLLVGDKVPHDLDMLLRATYFGSIVLLSPAVIDS-------------P 270
           AM + F    L LL    +  H LD+ +    F  +  L+ A + +             P
Sbjct: 421 AMSANFLGSVLTLL----QKQHALDLDITNGMFEELPPLTTATLGALIPKVFQQYPESCP 476

Query: 271 LKLELRVLAPPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSMTMDARLSAKMALRGK 330
           L + ++VL PP   ++     + V A+  + +  P   E  +  + +D    A  +  G 
Sbjct: 477 LIIRIQVLNPPSVMLQKDKALVKVLATAEVMVSQPKDLETTICLIDVDTEFLASFSTEGD 536

Query: 331 ALRTQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGI 390
            L     L +  +    S + +  +  ++  ++ +  +  MP +N     GV +P    I
Sbjct: 537 KLMIDAKLEKTSLNLRTSNVGNFDIGLMEVLVEKIFDLAFMPAMNAVLGSGVPLPKILNI 596

Query: 391 NF 392
           +F
Sbjct: 597 DF 598


>gi|15055535 bactericidal/permeability-increasing protein-like 1
           [Homo sapiens]
          Length = 458

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 62/310 (20%), Positives = 125/310 (40%), Gaps = 23/310 (7%)

Query: 116 LSTFITSGMRFLLNQQIC---PVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPV 172
           L   +   ++ +L+ ++C     L     V L +L+   PV         I YS++  P 
Sbjct: 157 LLVLVQKHIKAVLSNKLCLSISNLVQGVNVHLGTLIGLNPVGPESQ----IRYSMVSVPT 212

Query: 173 ASTSNLDMDFRGAFFPLTERNWSLPNRAVEPQLQE----EERMVYVAFSEFFFDSAMESY 228
            ++  + ++     F L  +   LP  A    L      E  M  V  S+  FDSA+   
Sbjct: 213 VTSDYISLEVNAVLF-LLGKPIILPTDATPFVLPRHVGTEGSMATVGLSQQLFDSALLLL 271

Query: 229 FRAGALQLLLVGDKVPHDLDMLLRATYFGSIVLLSPAVI-----DSPLKLELRVLAPPRC 283
            +AGAL L + G       D LL  +  G ++   P V        P+ L++R+ A P  
Sbjct: 272 QKAGALNLDITGQL--RSDDNLLNTSALGRLI---PEVARQFPEPMPVVLKVRLGATPVA 326

Query: 284 TIKPSGTTISVTASVTIALVPPDQPEVQLSSMTMDARLSAKMAL-RGKALRTQLDLRRFR 342
            +  +  T+ +   V +     +     L S+ +   L  ++++ + K   T   L   +
Sbjct: 327 MLHTNNATLRLQPFVEVLATASNSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQ 386

Query: 343 IYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAG 402
           +    S +  +    ++  + T+ +  ++  LN     G+ +P    +++V   +  + G
Sbjct: 387 LTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEG 446

Query: 403 FLTIGADLHF 412
           ++ I + L +
Sbjct: 447 YVVISSGLFY 456


>gi|239757484 PREDICTED: similar to
           bactericidal/permeability-increasing protein [Homo
           sapiens]
          Length = 159

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query: 358 LQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADL 410
           LQ  +  ++ I V+P +NE+  +G  +P P  +   + V+  H  FL  GAD+
Sbjct: 104 LQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADV 156



 Score = 33.1 bits (74), Expect = 0.52
 Identities = 13/52 (25%), Positives = 27/52 (51%)

Query: 132 ICPVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFR 183
           +C  + ++ +  L     T+PV + +D + GI+Y L+  P  +   LD+  +
Sbjct: 49  VCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMK 100


>gi|94400919 WD repeat domain 90 [Homo sapiens]
          Length = 1748

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 260 VLLSPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTIALVPPDQPEVQLSSMTMDA 319
           VLL P     PL   +    P R ++ P   T S TAS   AL P   PEV LS    DA
Sbjct: 246 VLLGPG--PQPLPCPVASSKPVRFSVSPVVQTPSPTASGRAALAPRPFPEVSLSQERSDA 303


>gi|105990532 apolipoprotein B precursor [Homo sapiens]
          Length = 4563

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 15/140 (10%)

Query: 9    LALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEGHFYYNISEV 68
            L  L   H+E+       TS+    V+Q   R +++ L  +T PD +GKE          
Sbjct: 4415 LVALKDFHSEYIVSASNFTSQLSSQVEQFLHRNIQEYLSILTDPDGKGKE---------- 4464

Query: 69   KVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFLKVYDFLSTFITSGMRFLL 128
            K+ EL  T+ E+     Q +  +   +    +FR +L  +  ++ D+   FI    R + 
Sbjct: 4465 KIAELSATAQEI--IKSQAIATKKIISDYHQQFRYKLQDFSDQLSDYYEKFIAESKRLI- 4521

Query: 129  NQQICPVLYHAGTVLLNSLL 148
               +    YH   + +  LL
Sbjct: 4522 --DLSIQNYHTFLIYITELL 4539


>gi|38202211 N-acetylglucosamine-1-phosphate transferase [Homo
           sapiens]
          Length = 1256

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 10/82 (12%)

Query: 298 VTIALVPPDQPEVQLSSMTMDARLS-AKMALRGKALRTQLDLRRFRIYSNHSALESLALI 356
           V I+L+P D    QLS  T+D +L    + L+G  L     LR F + S H+ +++ A+I
Sbjct: 698 VNISLLPKD---AQLSLNTLDLQLEHGDITLKGYNLSKSALLRSFLMNSQHAKIKNQAII 754

Query: 357 ------PLQAPLKTMLQIGVMP 372
                  L AP +  +   ++P
Sbjct: 755 TDETNDSLVAPQEKQVHKSILP 776


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 10/95 (10%)

Query: 280  PPRCTIKPSGT-----TISVTASVTIALVPPDQP-EVQLSSMTMDARLSAKMALRGKALR 333
            PP CT  P+ T     T  VT S  + L PP  P    ++++ +  R  A++  +  A  
Sbjct: 2502 PPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSVPISASVTNLPLGLRPEAELCAQALASP 2561

Query: 334  TQLDLRRFRIYSNHSALESLALIPLQAPLKTMLQI 368
              L+L         S   SL+L+P +  L   ++I
Sbjct: 2562 ESLELASVA----SSETSSLSLVPPKDLLPVAVEI 2592



 Score = 28.9 bits (63), Expect = 9.7
 Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 260  VLLSPAVIDSPLKLELRVLAPPRCTIKPSG--TTISVTASVTIALVPPDQPEVQ--LSSM 315
            V LSPA       L   +  PP  T  P+   TT + TA+ T   VP   P  Q  + S 
Sbjct: 1114 VRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSP 1173

Query: 316  TMDARL 321
             M ARL
Sbjct: 1174 DMQARL 1179


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 284 TIKPSGTTISVTASVTIALVPPDQPEVQLS-SMTMDARLSAKMALRGKALRTQLDLRRFR 342
           T+ P  T  S+T+    A  PPD P +Q   S+     L   ++     L + L +   +
Sbjct: 431 TMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQ 490

Query: 343 IYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERT 378
                 AL SLA    QAPL ++    +MP L  ++
Sbjct: 491 ------ALSSLASHSPQAPLSSL----IMPPLETQS 516


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.137    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,785,256
Number of Sequences: 37866
Number of extensions: 603445
Number of successful extensions: 1404
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1379
Number of HSP's gapped (non-prelim): 22
length of query: 441
length of database: 18,247,518
effective HSP length: 105
effective length of query: 336
effective length of database: 14,271,588
effective search space: 4795253568
effective search space used: 4795253568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.