LOC390748 2609

Name: LOC390748	Sequence: fasta or formatted (289aa)		NCBI GI: 122937418
Description: similar to poly(A)binding protein nuclear-like 1		Referenced in: Polyadenylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 23 2 C cysteine 1.7 5 1 D aspartate 3.8 11 1 E glutamate 11.8 34 4 F phenylalanine 3.1 9 1 G glycine 10.7 31 2 H histidine 2.4 7 1 I isoleucine 2.4 7 1 K lysine 4.2 12 1 L leucine 8.3 24 2 M methionine 1.0 3 1 N asparagine 1.7 5 1 P proline 9.3 27 3 Q glutamine 5.5 16 3 R arginine 5.5 16 1 S serine 6.2 18 2 T threonine 4.5 13 1 V valine 6.2 18 3 W tryptophan 2.1 6 1 Y tyrosine 1.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 similar to poly(A)binding protein nuclear-like 1 [H... PABPN1 0.267 poly(A) binding protein, nuclear 1 RBM34 0.064 RNA binding motif protein 34 isoform 1 RBM19 0.047 RNA binding motif protein 19 RBM19 0.047 RNA binding motif protein 19 RBM19 0.047 RNA binding motif protein 19 CSTF2 0.045 cleavage stimulation factor subunit 2 CSTF2T 0.043 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... EWSR1 0.040 Ewing sarcoma breakpoint region 1 isoform 4 EWSR1 0.040 Ewing sarcoma breakpoint region 1 isoform 3 EWSR1 0.040 Ewing sarcoma breakpoint region 1 isoform 1 EWSR1 0.040 Ewing sarcoma breakpoint region 1 isoform 2 TAF15 0.038 TBP-associated factor 15 isoform 2 TAF15 0.038 TBP-associated factor 15 isoform 1 HNRNPD 0.038 heterogeneous nuclear ribonucleoprotein D isoform b ... HNRNPD 0.038 heterogeneous nuclear ribonucleoprotein D isoform d ... LARP7 0.038 La ribonucleoprotein domain family, member 7 LARP7 0.038 La ribonucleoprotein domain family, member 7 HNRPDL 0.036 heterogeneous nuclear ribonucleoprotein D-like [Homo... DAZL 0.035 deleted in azoospermia-like HNRNPAB 0.035 heterogeneous nuclear ribonucleoprotein A/B isoform ... HNRNPAB 0.035 heterogeneous nuclear ribonucleoprotein A/B isoform ... SNRNP70 0.033 U1 small nuclear ribonucleoprotein 70 kDa DAZAP1 0.033 DAZ associated protein 1 isoform a DAZAP1 0.033 DAZ associated protein 1 isoform b SFRS2 0.033 splicing factor, arginine/serine-rich 2 RBMXL2 0.033 testes-specific heterogenous nuclear ribonucleoprot... RBM28 0.033 RNA binding motif protein 28 HNRNPA1L2 0.031 heterogeneous nuclear ribonucleoprotein A1-like [Hom... HNRNPA1L2 0.031 heterogeneous nuclear ribonucleoprotein A1-like [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.