CTDSP1 25978

Name: CTDSP1	Sequence: fasta or formatted (260aa)		NCBI GI: 32813443
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 isoform 2		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [261aa] CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) s...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 20 2 C cysteine 2.3 6 2 D aspartate 8.8 23 2 E glutamate 5.4 14 2 F phenylalanine 5.0 13 2 G glycine 5.0 13 1 H histidine 3.1 8 1 I isoleucine 3.8 10 2 K lysine 4.6 12 1 L leucine 10.8 28 2 M methionine 1.2 3 1 N asparagine 2.7 7 2 P proline 6.5 17 1 Q glutamine 3.5 9 1 R arginine 6.9 18 2 S serine 8.1 21 2 T threonine 1.9 5 1 V valine 9.6 25 2 W tryptophan 0.8 2 1 Y tyrosine 2.3 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDSP1 0.992 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDSPL 0.669 small CTD phosphatase 3 isoform 2 CTDSPL 0.655 small CTD phosphatase 3 isoform 1 CTDSP2 0.574 nuclear LIM interactor-interacting factor 2 CTDSPL2 0.255 CTD (carboxy-terminal domain, RNA polymerase II, po... DULLARD 0.229 dullard homolog DULLARD 0.229 dullard homolog TIMM50 0.110 translocase of inner mitochondrial membrane 50 homol... CTDP1 0.040 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDP1 0.040 CTD (carboxy-terminal domain, RNA polymerase II, pol... FAF2 0.014 UBX domain containing 8 HSPA12B 0.010 heat shock 70kD protein 12B TTN 0.006 titin isoform N2-A TTN 0.006 titin isoform novex-2 TTN 0.006 titin isoform novex-1 TTN 0.006 titin isoform N2-B LOC100130174 0.006 PREDICTED: hypothetical protein LOC100130174 0.006 PREDICTED: hypothetical protein LOC100130174 0.006 PREDICTED: hypothetical protein UCK2 0.006 uridine-cytidine kinase 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.