Guide to the Human Genome
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Name: ABHD12B Sequence: fasta or formatted (285aa) NCBI GI: 32528310
Description:

abhydrolase domain containing 12B isoform c

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [255aa] abhydrolase domain containing 12B isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         24           3
 C cysteine            3.2          9           2
 D aspartate           6.3         18           2
 E glutamate           5.3         15           2
 F phenylalanine       3.2          9           1
 G glycine             7.0         20           2
 H histidine           2.8          8           1
 I isoleucine          4.9         14           2
 K lysine              6.3         18           2
 L leucine             9.8         28           2
 M methionine          1.8          5           1
 N asparagine          3.9         11           1
 P proline             6.7         19           2
 Q glutamine           1.4          4           1
 R arginine            6.0         17           1
 S serine              5.6         16           2
 T threonine           4.9         14           2
 V valine              7.0         20           1
 W tryptophan          2.5          7           2
 Y tyrosine            3.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain containing 12B isoform c 
ABHD12B               0.865   abhydrolase domain containing 12B isoform b 
ABHD12                0.381   abhydrolase domain containing 12 isoform a 
ABHD12                0.371   abhydrolase domain containing 12 isoform b 
FAM108A4              0.079   PREDICTED: hypothetical protein 
ABHD13                0.077   abhydrolase domain containing 13 
FAM108A1              0.077   hypothetical protein LOC81926 isoform 2 
FAM108A1              0.077   hypothetical protein LOC81926 isoform 1 
FAM108A5              0.073   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              0.073   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              0.073   PREDICTED: hypothetical protein LOC729495 
FAM108B1              0.072   family with sequence similarity 108, member B1 isofo...
FAM108B1              0.072   family with sequence similarity 108, member B1 isofo...
LOC100289252          0.068   PREDICTED: hypothetical protein XP_002342156 
FAM108C1              0.065   hypothetical protein LOC58489 
BAT5                  0.023   HLA-B associated transcript 5 
C20orf135             0.019   hypothetical protein LOC140701 
EPHX3                 0.017   abhydrolase domain containing 9 
EPHX3                 0.017   abhydrolase domain containing 9 
PPME1                 0.017   protein phosphatase methylesterase 1 
ABHD14A               0.014   abhydrolase domain containing 14A 
EPHX2                 0.012   epoxide hydrolase 2, cytoplasmic 
ABHD11                0.012   abhydrolase domain containing 11 isoform 2 
EPHX4                 0.010   abhydrolase domain containing 7 
ABHD11                0.010   abhydrolase domain containing 11 isoform 1 
ABHD11                0.010   abhydrolase domain containing 11 isoform 8 
APEH                  0.009   N-acylaminoacyl-peptide hydrolase 
LYPLA2                0.007   lysophospholipase II 
ACACB                 0.005   acetyl-Coenzyme A carboxylase beta 
ABHD10                0.005   abhydrolase domain containing 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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