Guide to the Human Genome
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Name: EPHX4 Sequence: fasta or formatted (362aa) NCBI GI: 218777837
Description:

abhydrolase domain containing 7

Referenced in:

Additional Enzymes and Related Sequences
Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         17           2
 C cysteine            3.0         11           1
 D aspartate           4.4         16           1
 E glutamate           5.0         18           2
 F phenylalanine       5.5         20           2
 G glycine             5.5         20           2
 H histidine           4.1         15           2
 I isoleucine          6.4         23           1
 K lysine              5.5         20           2
 L leucine            13.5         49           3
 M methionine          2.8         10           1
 N asparagine          2.5          9           1
 P proline             5.5         20           2
 Q glutamine           2.8         10           2
 R arginine            5.5         20           2
 S serine              5.8         21           2
 T threonine           4.7         17           2
 V valine              4.4         16           2
 W tryptophan          2.8         10           1
 Y tyrosine            5.5         20           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain containing 7 
EPHX3                 0.408   abhydrolase domain containing 9 
EPHX3                 0.408   abhydrolase domain containing 9 
EPHX2                 0.181   epoxide hydrolase 2, cytoplasmic 
ABHD8                 0.061   abhydrolase domain containing 8 
ABHD11                0.049   abhydrolase domain containing 11 isoform 1 
ABHD11                0.049   abhydrolase domain containing 11 isoform 2 
SERHL2                0.038   serine hydrolase-like 2 
BPHL                  0.032   biphenyl hydrolase-like 
ABHD5                 0.030   abhydrolase domain containing 5 
ABHD11                0.030   abhydrolase domain containing 11 isoform 8 
MEST                  0.030   mesoderm specific transcript isoform a 
MEST                  0.030   mesoderm specific transcript isoform b 
MEST                  0.030   mesoderm specific transcript isoform b 
ABHD4                 0.028   abhydrolase domain containing 4 
ABHD6                 0.027   abhydrolase domain containing 6 
PPME1                 0.024   protein phosphatase methylesterase 1 
EPHX1                 0.018   epoxide hydrolase 1 
EPHX1                 0.018   epoxide hydrolase 1 
ABHD10                0.008   abhydrolase domain containing 10 
ABHD12B               0.008   abhydrolase domain containing 12B isoform c 
C7orf10               0.007   dermal papilla derived protein 13 
ABHD12B               0.007   abhydrolase domain containing 12B isoform b 
ABHD12                0.007   abhydrolase domain containing 12 isoform a 
ABHD12                0.007   abhydrolase domain containing 12 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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