Guide to the Human Genome
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Name: SLC39A3 Sequence: fasta or formatted (314aa) NCBI GI: 32490561
Description:

solute carrier family 39 (zinc transporter), member 3 isoform a

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [105aa] solute carrier family 39 (zinc transporter), member 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         28           2
 C cysteine            1.0          3           1
 D aspartate           2.2          7           1
 E glutamate           6.4         20           2
 F phenylalanine       7.0         22           3
 G glycine             9.9         31           3
 H histidine           2.2          7           1
 I isoleucine          4.5         14           2
 K lysine              5.1         16           2
 L leucine            17.5         55           3
 M methionine          2.9          9           1
 N asparagine          1.0          3           1
 P proline             3.5         11           1
 Q glutamine           1.9          6           1
 R arginine            2.9          9           1
 S serine              8.0         25           1
 T threonine           4.1         13           1
 V valine              9.6         30           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 39 (zinc transporter), member ... 
SLC39A1               0.257   solute carrier family 39 (zinc transporter), member ...
SLC39A3               0.201   solute carrier family 39 (zinc transporter), member ...
SLC39A2               0.168   solute carrier family 39 (zinc transporter), member...
SLC39A13              0.028   solute carrier family 39 (zinc transporter), member ...
SLC39A13              0.024   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.012   solute carrier family 39 (zinc transporter), member...
SLITRK5               0.012   SLIT and NTRK-like family, member 5 
ZNF445                0.010   zinc finger protein 445 
PCSK7                 0.009   proprotein convertase subtilisin/kexin type 7 prepro...
ELN                   0.009   elastin isoform e precursor 
ELN                   0.009   elastin isoform d precursor 
ELN                   0.009   elastin isoform c precursor 
ELN                   0.009   elastin isoform b precursor 
ELN                   0.009   elastin isoform a precursor 
UBASH3A               0.009   ubiquitin associated and SH3 domain containing, A lon...
RBM42                 0.009   RNA binding motif protein 42 
SLC39A9               0.007   solute carrier family 39 (zinc transporter), member ...
GHITM                 0.005   growth hormone inducible transmembrane protein [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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