Search of human proteins with 32189394

Search of human proteins with 32189394

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32189394 mitochondrial ATP synthase beta subunit precursor
[Homo sapiens]
         (529 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32189394 mitochondrial ATP synthase beta subunit precursor [H...  1025   0.0  
gi|19913426 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subu...   122   1e-27
gi|19913428 vacuolar H+ATPase B2 [Homo sapiens]                       117   2e-26
gi|19913424 ATPase, H+ transporting, lysosomal V1 subunit A [Hom...   115   1e-25
gi|50345984 ATP synthase, H+ transporting, mitochondrial F1 comp...   103   3e-22
gi|4757810 ATP synthase, H+ transporting, mitochondrial F1 compl...   103   3e-22
gi|32401433 G protein-coupled receptor 142 [Homo sapiens]              36   0.099
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap...    33   0.49 
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]         32   1.4  
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    31   2.5  
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]          31   2.5  
gi|6912338 dynein, axonemal, intermediate chain 1 [Homo sapiens]       30   5.5  
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ...    29   9.3  
gi|116014339 olfactomedin-like 2A [Homo sapiens]                       29   9.3  
gi|163965366 nascent polypeptide-associated complex alpha subuni...    29   9.3  

>gi|32189394 mitochondrial ATP synthase beta subunit precursor [Homo
           sapiens]
          Length = 529

 Score = 1025 bits (2650), Expect = 0.0
 Identities = 529/529 (100%), Positives = 529/529 (100%)

Query: 1   MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAAT 60
           MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAAT
Sbjct: 1   MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAAT 60

Query: 61  GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLV 120
           GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLV
Sbjct: 61  GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLV 120

Query: 121 RGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQ 180
           RGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQ
Sbjct: 121 RGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQ 180

Query: 181 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 240
           EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT
Sbjct: 181 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 240

Query: 241 REGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQD 300
           REGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQD
Sbjct: 241 REGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQD 300

Query: 301 VLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAI 360
           VLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAI
Sbjct: 301 VLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAI 360

Query: 361 YVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDV 420
           YVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDV
Sbjct: 361 YVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDV 420

Query: 421 ARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGK 480
           ARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGK
Sbjct: 421 ARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGK 480

Query: 481 LVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS 529
           LVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS
Sbjct: 481 LVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS 529


>gi|19913426 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit
           B1 [Homo sapiens]
          Length = 513

 Score =  122 bits (305), Expect = 1e-27
 Identities = 112/428 (26%), Positives = 195/428 (45%), Gaps = 34/428 (7%)

Query: 96  VLEVAQHLGESTVRTIAMDGTEGLVRGQKVLD-SGAPIKIPVGPETLGRIMNVIGEPIDE 154
           VLEVA   G   +  +  +GT G+   +   + +G  ++ PV  + LGR+ N  G+PID+
Sbjct: 80  VLEVA---GTKAIVQV-FEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 135

Query: 155 RGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 214
              +  + F  I+ +          +E++ TGI  +D++   A+G KI +F  AG+    
Sbjct: 136 GPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNE 195

Query: 215 LIMELINNV-----AKAHGGYS------VFAGVGERTREGNDLYHEMIESGVINLKDATS 263
           +  ++         +KA   Y       VFA +G           +  ++G +       
Sbjct: 196 IAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTM------G 249

Query: 264 KVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLG 323
            V L     N+P   R       LT AE+   Q  + VL+ + ++  + +A  EVSA   
Sbjct: 250 NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE 309

Query: 324 RIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 381
            +P   G+   + TD+ T+ ER      + GSIT +  + +P DD+T P P  T    + 
Sbjct: 310 EVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEG 369

Query: 382 TTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----VGSEHYDVARGVQKILQDYKSLQDI 437
              + R +    IYP ++ L S SR+M   I       +H DV+  +       K +Q +
Sbjct: 370 QIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAM 429

Query: 438 IAILGMDELSEEDKLTVSRARKIQR-FLSQ-PFQVAEVFTG-HMG-KLVPL--KETIKGF 491
            A++G + L+ ED L +   +K ++ F++Q P++   VF    +G KL+ +  KE +K  
Sbjct: 430 KAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRI 489

Query: 492 QQILAGEY 499
            Q +  E+
Sbjct: 490 PQAVIDEF 497


>gi|19913428 vacuolar H+ATPase B2 [Homo sapiens]
          Length = 511

 Score =  117 bits (294), Expect = 2e-26
 Identities = 118/481 (24%), Positives = 209/481 (43%), Gaps = 35/481 (7%)

Query: 15  GALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQ 74
           G +    P   +P     + A   A+   R+Y +Q   + K  +     + ++  V   +
Sbjct: 8   GIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVILDHVKFPR 67

Query: 75  FDEGLPPILNALEVQG-RETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLD-SGAPI 132
           + E    I++     G + +  VLEV+   G   V  +  +GT G+   +   + +G  +
Sbjct: 68  YAE----IVHLTLPDGTKRSGQVLEVS---GSKAVVQV-FEGTSGIDAKKTSCEFTGDIL 119

Query: 133 KIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDL 192
           + PV  + LGR+ N  G+PID    +  + F  I  +          +E++ TGI  +D 
Sbjct: 120 RTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDG 179

Query: 193 LAPYAKGGKIGLFGGAGVGKTVLIMELINNV-----AKAHGGYS------VFAGVGERTR 241
           +   A+G KI +F  AG+    +  ++         +K    YS      VFA +G    
Sbjct: 180 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNME 239

Query: 242 EGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDV 301
                  +  E+G ++       V L     N+P   R       LT AE+   Q  + V
Sbjct: 240 TARFFKSDFEENGSMD------NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHV 293

Query: 302 LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQA 359
           L+ + ++  + +A  EVSA    +P   G+   + TD+ T+ ER      + GSIT +  
Sbjct: 294 LVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPI 353

Query: 360 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----VGS 415
           + +P DD+T P P  T    +    + R +    IYP ++ L S SR+M   I       
Sbjct: 354 LTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRK 413

Query: 416 EHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQR-FLSQ-PFQVAEV 473
           +H DV+  +       K +Q + A++G + L+ +D L +   +K +R F++Q P++   V
Sbjct: 414 DHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTV 473

Query: 474 F 474
           F
Sbjct: 474 F 474


>gi|19913424 ATPase, H+ transporting, lysosomal V1 subunit A [Homo
           sapiens]
          Length = 617

 Score =  115 bits (287), Expect = 1e-25
 Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 26/303 (8%)

Query: 183 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTRE 242
           L+TG +V+D L P  +GG   + G  G GKTV+   L      ++    ++ G GER  E
Sbjct: 227 LLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSK---YSNSDVIIYVGCGERGNE 283

Query: 243 GNDLYHEMIESGVI---NLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 299
            +++  +  E  +     ++    + ALV    N P  AR     TG+T++EYFRD  G 
Sbjct: 284 MSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDM-GY 342

Query: 300 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KG 352
            V +  D+  R+ +A  E+S  L  +P+  GY   L   + +  ER    K       +G
Sbjct: 343 HVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREG 402

Query: 353 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI 412
           S++ V A+  P  D +DP  + T   +     L + +A+   +P+V+ L S S+ M    
Sbjct: 403 SVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMR--- 459

Query: 413 VGSEHYD--------VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ-RF 463
              E+YD        +    ++ILQ+ + L +I+ ++G   L+E DK+T+  A+ I+  F
Sbjct: 460 ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDF 519

Query: 464 LSQ 466
           L Q
Sbjct: 520 LQQ 522



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 105 ESTVRTIAM-DGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDE 154
           E  + TI + + T G+  G  VL +G P+ + +GP  +G I + I  P+ +
Sbjct: 58  EGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSD 108


>gi|50345984 ATP synthase, H+ transporting, mitochondrial F1
           complex, alpha subunit precursor [Homo sapiens]
          Length = 553

 Score =  103 bits (258), Expect = 3e-22
 Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 35/401 (8%)

Query: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAE 169
           + + G + L++ G  V  +GA + +PVG E LGR+++ +G  ID +GPI +K    +  +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175

Query: 170 APEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 229
           AP  +     +E + TGIK VD L P  +G +  + G    GKT + ++ I N  + + G
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDG 235

Query: 230 -------YSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARV 282
                  Y ++  +G++      L   + ++      DA     +V    ++    +   
Sbjct: 236 SDEKKKLYCIYVAIGQKRSTVAQLVKRLTDA------DAMKYTIVVSATASDAAPLQYLA 289

Query: 283 ALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTM 342
             +G ++ EYFRD  G+  L+  D++ +   A  ++S LL R P    Y   +      +
Sbjct: 290 PYSGCSMGEYFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 343 QERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 398
            ER          GS+T++  I   A D++   P    +  D    L   +   GI PA+
Sbjct: 349 LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 399 DPLDSTSRIMDPNIVGSEHYDVARGVQKI-LQDYKSLQDIIAILGMDELSEEDKLTVSRA 457
           +   S SR+   +   +       G  K+ L  Y+ +    A  G D L    +  +SR 
Sbjct: 409 NVGLSVSRV--GSAAQTRAMKQVAGTMKLELAQYREVA-AFAQFGSD-LDAATQQLLSRG 464

Query: 458 RKIQRFLSQ--------PFQVAEVFT---GHMGKLVPLKET 487
            ++   L Q          QVA ++    G++ KL P K T
Sbjct: 465 VRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505


>gi|4757810 ATP synthase, H+ transporting, mitochondrial F1 complex,
           alpha subunit precursor [Homo sapiens]
          Length = 553

 Score =  103 bits (258), Expect = 3e-22
 Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 35/401 (8%)

Query: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAE 169
           + + G + L++ G  V  +GA + +PVG E LGR+++ +G  ID +GPI +K    +  +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175

Query: 170 APEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 229
           AP  +     +E + TGIK VD L P  +G +  + G    GKT + ++ I N  + + G
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDG 235

Query: 230 -------YSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARV 282
                  Y ++  +G++      L   + ++      DA     +V    ++    +   
Sbjct: 236 SDEKKKLYCIYVAIGQKRSTVAQLVKRLTDA------DAMKYTIVVSATASDAAPLQYLA 289

Query: 283 ALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTM 342
             +G ++ EYFRD  G+  L+  D++ +   A  ++S LL R P    Y   +      +
Sbjct: 290 PYSGCSMGEYFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348

Query: 343 QERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 398
            ER          GS+T++  I   A D++   P    +  D    L   +   GI PA+
Sbjct: 349 LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408

Query: 399 DPLDSTSRIMDPNIVGSEHYDVARGVQKI-LQDYKSLQDIIAILGMDELSEEDKLTVSRA 457
           +   S SR+   +   +       G  K+ L  Y+ +    A  G D L    +  +SR 
Sbjct: 409 NVGLSVSRV--GSAAQTRAMKQVAGTMKLELAQYREVA-AFAQFGSD-LDAATQQLLSRG 464

Query: 458 RKIQRFLSQ--------PFQVAEVFT---GHMGKLVPLKET 487
            ++   L Q          QVA ++    G++ KL P K T
Sbjct: 465 VRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505


>gi|32401433 G protein-coupled receptor 142 [Homo sapiens]
          Length = 462

 Score = 35.8 bits (81), Expect = 0.099
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query: 425 QKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ 461
           QKI     SLQDI A+LG +  +EEDK  VS A+K Q
Sbjct: 10  QKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQ 46


>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
           sapiens]
          Length = 254

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 21/64 (32%), Positives = 31/64 (48%)

Query: 9   AAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAATGRIVAVIG 68
           AA+PA+ A   + P+A+ P A  L  A+PTA  P     A  +P     AA     A + 
Sbjct: 113 AASPAAVAPAAVCPAAASPSAASLCAASPTAAAPAAASPAAAAPLAVNPAAAAPAAACVQ 172

Query: 69  AVVD 72
           +V +
Sbjct: 173 SVAE 176



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 9   AAAPASGALRRLTPSASLP-----PAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAATGRI 63
           AA P++ +LR   P A  P     PA  L  A+P AV P     A  SPS  +  A    
Sbjct: 83  AAGPSAASLRAANPLAVAPAAVRRPAATLGAASPAAVAPAAVCPAAASPSAASLCAASPT 142

Query: 64  VAVIGA 69
            A   A
Sbjct: 143 AAAPAA 148


>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
          Length = 547

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 6   GRVAAAPASGALRRLTPSASLPPAQLL--LRAAPTAVHPVRDYAAQTSPSPKAGAATG 61
           G V  APA+GA R L P  +  P QLL   + +PT   PV   AA     P  GAA G
Sbjct: 47  GGVGCAPAAGAGRLLQPIRATVPYQLLRGSQHSPTR-PPVAAAAASLGSLPGPGAARG 103


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 20/61 (32%), Positives = 28/61 (45%)

Query: 9   AAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAATGRIVAVIG 68
           AA P + AL  + P+A+ P A  L  A+P A  P     A  +P+     A G   A + 
Sbjct: 153 AAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLC 212

Query: 69  A 69
           A
Sbjct: 213 A 213



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 9   AAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAATGRIVAVIG 68
           AA P + A   + P+A+ P A  L  A+P A  P    AA   P+  AG     + AV  
Sbjct: 109 AAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPA--AGPPAAALAAVYP 166

Query: 69  AVVD 72
           A  D
Sbjct: 167 AAAD 170


>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
          Length = 887

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 13/138 (9%)

Query: 8   VAAAPASGALRRLTPSASLPPAQLLLRAAP---TAVHPVRDYAAQTSPSPKAGAATGRIV 64
           +AAA A+ A      +A+ P   L   AAP    A  P    AA  +P+P A  A     
Sbjct: 499 IAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAP 558

Query: 65  AVIGAVVDVQFDEGLPPILN------ALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEG 118
           A   +       +   P++       A +   +  ++   +    G + ++ I     EG
Sbjct: 559 AAAASAAPSHSQKPSVPLIQASRPCPAAQPPTKFIKIAPAIQLRTGSTGLKAI---NVEG 615

Query: 119 LVRGQKVLDSG-APIKIP 135
            V+G + L S   P++ P
Sbjct: 616 PVQGAQALGSSFKPVQAP 633


>gi|6912338 dynein, axonemal, intermediate chain 1 [Homo sapiens]
          Length = 699

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 12/79 (15%)

Query: 6   GRVAAAPASGALRRLTPSASLPPAQ-----------LLLRAAPTAVHPVRDYAAQTSPSP 54
           G     PA+GA  ++T    + P Q              RA+ T  +PVRD   QT P P
Sbjct: 158 GSQTDVPAAGAAEKVTEEELMTPKQPKERKLTNQFNFSERASQTYNNPVRDRECQTEPPP 217

Query: 55  KAG-AATGRIVAVIGAVVD 72
           +   +AT     +  A V+
Sbjct: 218 RTNFSATANQWEIYDAYVE 236


>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
            sapiens]
          Length = 1336

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 11/84 (13%)

Query: 5    VGRVAAAPASGALRRLTPSASLPPAQ------LLLRAAPTAVHPVRDYAAQTS-PSPKAG 57
            +G   AAP   A R L+P A+ PP +       ++R    A  P   +    S P+P A 
Sbjct: 977  LGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPSPPAPPAA 1036

Query: 58   AATGRIVAVIGAVVDVQFDEGLPP 81
            AAT    AV   +  + F++  PP
Sbjct: 1037 AAT----AVGPPLCRLAFEDESPP 1056


>gi|116014339 olfactomedin-like 2A [Homo sapiens]
          Length = 652

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/46 (36%), Positives = 24/46 (52%)

Query: 414 GSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARK 459
           GS+  D ARG  K +  Y S+Q   A  G+ +  +E  L V + RK
Sbjct: 219 GSKAQDTARGKGKDISKYGSVQKSFADRGLPKPPKEKLLQVEKLRK 264


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 12/45 (26%)

Query: 21   TPSASLP-----PAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAAT 60
            TP+A+LP     PA   L+ APT         A T PSPK G AT
Sbjct: 1059 TPAATLPSPKGGPATPSLKGAPTP-------PAATPPSPKGGPAT 1096


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,431,625
Number of Sequences: 37866
Number of extensions: 822311
Number of successful extensions: 2522
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2452
Number of HSP's gapped (non-prelim): 61
length of query: 529
length of database: 18,247,518
effective HSP length: 107
effective length of query: 422
effective length of database: 14,195,856
effective search space: 5990651232
effective search space used: 5990651232
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.