Guide to the Human Genome
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Name: NDRG3 Sequence: fasta or formatted (363aa) NCBI GI: 32130514
Description:

N-myc downstream-regulated gene 3 isoform b

Referenced in:

Myc and Related Functions

Other entries for this name:
alt prot [375aa] N-myc downstream-regulated gene 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         20           2
 C cysteine            2.2          8           1
 D aspartate           5.8         21           1
 E glutamate           6.1         22           2
 F phenylalanine       3.3         12           2
 G glycine             7.2         26           2
 H histidine           3.9         14           2
 I isoleucine          5.8         21           2
 K lysine              3.6         13           1
 L leucine            11.0         40           2
 M methionine          2.5          9           1
 N asparagine          5.5         20           1
 P proline             5.2         19           2
 Q glutamine           5.5         20           2
 R arginine            3.6         13           2
 S serine              7.7         28           3
 T threonine           6.3         23           2
 V valine              6.6         24           2
 W tryptophan          0.6          2           1
 Y tyrosine            2.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-myc downstream-regulated gene 3 isoform b 
NDRG3                 0.989   N-myc downstream-regulated gene 3 isoform a 
NDRG1                 0.624   N-myc downstream regulated 1 
NDRG1                 0.624   N-myc downstream regulated 1 
NDRG4                 0.591   NDRG family member 4 isoform 2 
NDRG4                 0.591   NDRG family member 4 isoform 1 
NDRG4                 0.591   NDRG family member 4 isoform 1 
NDRG2                 0.540   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.540   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.540   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.540   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.530   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.530   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.530   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.530   N-myc downstream-regulated gene 2 isoform a 
ABHD11                0.011   abhydrolase domain containing 11 isoform 1 
ABHD11                0.011   abhydrolase domain containing 11 isoform 2 
POSTN                 0.007   periostin, osteoblast specific factor isoform 4 [Ho...
POSTN                 0.007   periostin, osteoblast specific factor isoform 3 [Ho...
POSTN                 0.007   periostin, osteoblast specific factor isoform 2 [Ho...
POSTN                 0.007   periostin, osteoblast specific factor isoform 1 [Ho...
MORC1                 0.007   MORC family CW-type zinc finger 1 
RALGPS1               0.007   Ral GEF with PH domain and SH3 binding motif 1 
CEP290                0.006   centrosomal protein 290kDa 
GPATCH1               0.006   G patch domain containing 1 
SFRS17A               0.004   DNA segment on chromosome X and Y (unique) 155 expre...
PLEKHM2               0.004   pleckstrin homology domain containing, family M (wi...
KIAA1432              0.004   connexin 43-interacting protein 150 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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