| Name: HPS6 | Sequence: fasta or formatted (775aa) | NCBI GI: 31881785 | |
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Description: Hermansky-Pudlak syndrome-6
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Referenced in: Lysosomes and Related Organelles
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.3 80 3 C cysteine 1.8 14 1 D aspartate 3.1 24 2 E glutamate 7.0 54 3 F phenylalanine 2.3 18 2 G glycine 10.7 83 3 H histidine 1.7 13 2 I isoleucine 0.9 7 1 K lysine 1.9 15 2 L leucine 18.1 140 5 M methionine 0.6 5 1 N asparagine 0.6 5 1 P proline 9.8 76 3 Q glutamine 4.6 36 3 R arginine 7.0 54 2 S serine 5.5 43 2 T threonine 4.8 37 2 V valine 5.7 44 2 W tryptophan 2.6 20 1 Y tyrosine 0.9 7 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 Hermansky-Pudlak syndrome-6 IGSF2 0.006 immunoglobulin superfamily, member 2 PKDREJ 0.006 receptor for egg jelly-like protein precursor ABCB10 0.006 ATP-binding cassette, sub-family B, member 10 [Homo... SENP3 0.005 SUMO1/sentrin/SMT3 specific protease 3 GPR6 0.005 G protein-coupled receptor 6 MBD5 0.005 methyl-CpG binding domain protein 5 TMPRSS11E2 0.005 transmembrane protease, serine 11E2 ARMCX2 0.005 ALEX2 protein ARMCX2 0.005 ALEX2 protein ACVR2B 0.005 activin A receptor, type IIB precursor MLLT4 0.005 myeloid/lymphoid or mixed-lineage leukemia (trithora... LOC100292727 0.005 PREDICTED: hypothetical protein TMPRSS11E 0.005 transmembrane protease, serine 11E GRID2IP 0.005 glutamate receptor, ionotropic, delta 2 (Grid2) int... LOC100293788 0.005 PREDICTED: hypothetical protein LOC100287321 0.005 PREDICTED: hypothetical protein SGIP1 0.005 SH3-domain GRB2-like (endophilin) interacting prote... PPRC1 0.005 peroxisome proliferator-activated receptor gamma, co... PRDM2 0.005 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.005 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.005 retinoblastoma protein-binding zinc finger protein i... WIPF3 0.005 WAS/WASL interacting protein family, member 3 [Homo... MYO1G 0.004 myosin IG LOC100293182 0.004 PREDICTED: hypothetical protein LOC100128719 0.004 PREDICTED: hypothetical protein, partial LOC100128719 0.004 PREDICTED: hypothetical protein, partial LOC100287321 0.004 PREDICTED: hypothetical protein XP_002344129 C1orf187 0.004 chromosome 1 open reading frame 187 ISLR2 0.004 immunoglobulin superfamily containing leucine-rich ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
