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Search of human proteins with 31563518
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31563518 microtubule-associated protein 1 light chain 3
alpha isoform b [Homo sapiens]
(125 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31563518 microtubule-associated protein 1 light chain 3 alpha... 253 2e-68
gi|14210522 microtubule-associated protein 1 light chain 3 alpha... 218 9e-58
gi|12383056 microtubule-associated proteins 1A/1B light chain 3 ... 185 7e-48
gi|148277548 microtubule-associated protein 1 light chain 3 beta... 182 7e-47
gi|169183885 PREDICTED: similar to microtubule-associated protei... 162 5e-41
gi|169179756 PREDICTED: similar to microtubule-associated protei... 162 5e-41
gi|169180155 PREDICTED: similar to microtubule-associated protei... 162 5e-41
gi|239755918 PREDICTED: similar to microtubule-associated protei... 134 2e-32
gi|239750436 PREDICTED: similar to microtubule-associated protei... 134 2e-32
gi|239744738 PREDICTED: similar to microtubule-associated protei... 134 2e-32
gi|51972260 microtubule-associated protein 1 light chain 3 gamma... 124 2e-29
gi|6005768 GABA(A) receptor-associated protein-like 2 [Homo sapi... 94 3e-20
gi|13899219 GABA(A) receptor-associated protein like 1 [Homo sap... 77 3e-15
gi|6005764 GABA(A) receptor-associated protein [Homo sapiens] 68 2e-12
gi|38261969 APG12 autophagy 12-like [Homo sapiens] 32 0.12
gi|194306653 Yes-associated protein 1, 65kDa isoform 1 [Homo sap... 29 0.81
gi|31542319 epsilon subunit of coatomer protein complex isoform ... 27 3.1
gi|40805827 epsilon subunit of coatomer protein complex isoform ... 27 3.1
gi|40805825 epsilon subunit of coatomer protein complex isoform ... 27 3.1
gi|153791466 AMIGO protein [Homo sapiens] 27 3.1
gi|55770834 centromere protein F [Homo sapiens] 27 5.2
gi|7019323 dolichyl-phosphate beta-glucosyltransferase isoform 1... 26 6.8
gi|50582996 multiple C2 domains, transmembrane 1 isoform S [Homo... 26 6.8
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 26 6.8
>gi|31563518 microtubule-associated protein 1 light chain 3 alpha
isoform b [Homo sapiens]
Length = 125
Score = 253 bits (647), Expect = 2e-68
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MKMRFFSSPCGKAAVDPADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPD 60
MKMRFFSSPCGKAAVDPADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPD
Sbjct: 1 MKMRFFSSPCGKAAVDPADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPD 60
Query: 61 HVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQ 120
HVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQ
Sbjct: 61 HVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQ 120
Query: 121 ETFGF 125
ETFGF
Sbjct: 121 ETFGF 125
>gi|14210522 microtubule-associated protein 1 light chain 3 alpha
isoform a [Homo sapiens]
Length = 121
Score = 218 bits (555), Expect = 9e-58
Identities = 108/108 (100%), Positives = 108/108 (100%)
Query: 18 ADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQL 77
ADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQL
Sbjct: 14 ADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQL 73
Query: 78 NPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 125
NPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF
Sbjct: 74 NPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
>gi|12383056 microtubule-associated proteins 1A/1B light chain 3
[Homo sapiens]
Length = 125
Score = 185 bits (470), Expect = 7e-48
Identities = 90/105 (85%), Positives = 99/105 (94%)
Query: 20 RCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNP 79
R ++V+ IR+QHP+KIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSEL+KIIRRRLQLN
Sbjct: 16 RVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNA 75
Query: 80 TQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
QAFFLLVN HSMVSVSTPI+++YE EKDEDGFLYMVYASQETFG
Sbjct: 76 NQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFG 120
>gi|148277548 microtubule-associated protein 1 light chain 3 beta 2
[Homo sapiens]
Length = 125
Score = 182 bits (461), Expect = 7e-47
Identities = 89/105 (84%), Positives = 98/105 (93%)
Query: 20 RCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNP 79
R ++V+ IR+QHP+KIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSEL+KIIRRRLQLN
Sbjct: 16 RVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNA 75
Query: 80 TQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
QAFFLLVN HSMVSVSTPI+++YE EKDEDGFLYMV ASQETFG
Sbjct: 76 NQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVCASQETFG 120
>gi|169183885 PREDICTED: similar to microtubule-associated proteins
1A/1B light chain 3 [Homo sapiens]
Length = 157
Score = 162 bits (411), Expect = 5e-41
Identities = 80/104 (76%), Positives = 93/104 (89%), Gaps = 2/104 (1%)
Query: 23 EVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPD--HVNMSELVKIIRRRLQLNPT 80
+V+ I++QHP+K PVI ERY+GEKQLPVLDKTKFLVPD VNMSEL+KIIRRRLQLN
Sbjct: 49 DVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNAN 108
Query: 81 QAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
QAF L+VN HSMVSVSTP++++YE EKDEDGFLYMVYASQET+G
Sbjct: 109 QAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYG 152
>gi|169179756 PREDICTED: similar to microtubule-associated proteins
1A/1B light chain 3 [Homo sapiens]
Length = 377
Score = 162 bits (411), Expect = 5e-41
Identities = 80/104 (76%), Positives = 93/104 (89%), Gaps = 2/104 (1%)
Query: 23 EVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPD--HVNMSELVKIIRRRLQLNPT 80
+V+ I++QHP+K PVI ERY+GEKQLPVLDKTKFLVPD VNMSEL+KIIRRRLQLN
Sbjct: 269 DVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNAN 328
Query: 81 QAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
QAF L+VN HSMVSVSTP++++YE EKDEDGFLYMVYASQET+G
Sbjct: 329 QAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYG 372
>gi|169180155 PREDICTED: similar to microtubule-associated proteins
1A/1B light chain 3 [Homo sapiens]
Length = 377
Score = 162 bits (411), Expect = 5e-41
Identities = 80/104 (76%), Positives = 93/104 (89%), Gaps = 2/104 (1%)
Query: 23 EVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPD--HVNMSELVKIIRRRLQLNPT 80
+V+ I++QHP+K PVI ERY+GEKQLPVLDKTKFLVPD VNMSEL+KIIRRRLQLN
Sbjct: 269 DVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNAN 328
Query: 81 QAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
QAF L+VN HSMVSVSTP++++YE EKDEDGFLYMVYASQET+G
Sbjct: 329 QAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYG 372
>gi|239755918 PREDICTED: similar to microtubule-associated protein 1
light chain 3 beta [Homo sapiens]
Length = 105
Score = 134 bits (336), Expect = 2e-32
Identities = 66/85 (77%), Positives = 74/85 (87%)
Query: 40 ERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPI 99
+RY+GEK+LPVLDKTKFLVPDHVNMSEL KII+R L+LN QAFFLLVN S VSVSTP
Sbjct: 14 KRYQGEKELPVLDKTKFLVPDHVNMSELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPT 73
Query: 100 ADIYEQEKDEDGFLYMVYASQETFG 124
+++YE EKDEDGFLY VYASQE FG
Sbjct: 74 SEVYEGEKDEDGFLYTVYASQEMFG 98
>gi|239750436 PREDICTED: similar to microtubule-associated protein 1
light chain 3 beta [Homo sapiens]
Length = 105
Score = 134 bits (336), Expect = 2e-32
Identities = 66/85 (77%), Positives = 74/85 (87%)
Query: 40 ERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPI 99
+RY+GEK+LPVLDKTKFLVPDHVNMSEL KII+R L+LN QAFFLLVN S VSVSTP
Sbjct: 14 KRYQGEKELPVLDKTKFLVPDHVNMSELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPT 73
Query: 100 ADIYEQEKDEDGFLYMVYASQETFG 124
+++YE EKDEDGFLY VYASQE FG
Sbjct: 74 SEVYEGEKDEDGFLYTVYASQEMFG 98
>gi|239744738 PREDICTED: similar to microtubule-associated proteins
1A/1B light chain 3 [Homo sapiens]
Length = 105
Score = 134 bits (336), Expect = 2e-32
Identities = 66/85 (77%), Positives = 74/85 (87%)
Query: 40 ERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPI 99
+RY+GEK+LPVLDKTKFLVPDHVNMSEL KII+R L+LN QAFFLLVN S VSVSTP
Sbjct: 14 KRYQGEKELPVLDKTKFLVPDHVNMSELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPT 73
Query: 100 ADIYEQEKDEDGFLYMVYASQETFG 124
+++YE EKDEDGFLY VYASQE FG
Sbjct: 74 SEVYEGEKDEDGFLYTVYASQEMFG 98
>gi|51972260 microtubule-associated protein 1 light chain 3 gamma
[Homo sapiens]
Length = 147
Score = 124 bits (311), Expect = 2e-29
Identities = 62/107 (57%), Positives = 79/107 (73%)
Query: 18 ADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQL 77
A R +EV IR + P+KIPV++ERY E LP LDKTKFLVP + M++ + IIR R+ L
Sbjct: 20 AIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVL 79
Query: 78 NPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
T+AF+LLVN S+VS+S +A+IY KDEDGF+YM YASQETFG
Sbjct: 80 RATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126
>gi|6005768 GABA(A) receptor-associated protein-like 2 [Homo
sapiens]
Length = 117
Score = 94.0 bits (232), Expect = 3e-20
Identities = 45/106 (42%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Query: 20 RCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNP 79
RC E +IR ++P ++PVI+E+ G Q+ +DK K+LVP + +++ + IIR+R+QL
Sbjct: 14 RCVESAKIRAKYPDRVPVIVEKVSGS-QIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPS 72
Query: 80 TQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 125
+A FL V++ ++ S + +YE+EKDEDGFLY+ Y+ + TFGF
Sbjct: 73 EKAIFLFVDK-TVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF 117
>gi|13899219 GABA(A) receptor-associated protein like 1 [Homo
sapiens]
Length = 117
Score = 77.4 bits (189), Expect = 3e-15
Identities = 37/105 (35%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 20 RCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNP 79
R KE ++IR ++P ++PVI+E+ + ++P LDK K+LVP + + + +IR+R+ L P
Sbjct: 14 RKKEGEKIRKKYPDRVPVIVEKAP-KARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRP 72
Query: 80 TQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
A F VN +++ S + +YE +ED FLY+ Y+ + +G
Sbjct: 73 EDALFFFVN-NTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
>gi|6005764 GABA(A) receptor-associated protein [Homo sapiens]
Length = 117
Score = 67.8 bits (164), Expect = 2e-12
Identities = 33/105 (31%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 20 RCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNP 79
R E ++IR ++P ++PVI+E+ + ++ LDK K+LVP + + + +IR+R+ L
Sbjct: 14 RRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRA 72
Query: 80 TQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
A F VN + + S + +Y++ +ED FLY+ Y+ + +G
Sbjct: 73 EDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
>gi|38261969 APG12 autophagy 12-like [Homo sapiens]
Length = 187
Score = 32.0 bits (71), Expect = 0.12
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 9 PCGKAAVDPADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELV 68
P AAV P ++ KI +++ K P++ K+ V + L+
Sbjct: 81 PPSSAAVSPG-----TEEPAGDTKKKIDILL---KAVGDTPIMKTKKWAVERTRTIQGLI 132
Query: 69 KIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
I++ L+L ++ F+ VNQ S + +YE DG L + Y + +G
Sbjct: 133 DFIKKFLKLVASEQLFIYVNQSFAPSPDQEVGTLYEC-FGSDGKLVLHYCKSQAWG 187
>gi|194306653 Yes-associated protein 1, 65kDa isoform 1 [Homo
sapiens]
Length = 504
Score = 29.3 bits (64), Expect = 0.81
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 76 QLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET 122
Q+N T V Q+ M S S P+ D +EQ +DG +Y + +T
Sbjct: 209 QMNVTAPTSPPVQQNMMNSASGPLPDGWEQAMTQDGEIYYINHKNKT 255
>gi|31542319 epsilon subunit of coatomer protein complex isoform a
[Homo sapiens]
Length = 308
Score = 27.3 bits (59), Expect = 3.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 87 VNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
+N+ V +S+P E++ + D FLY Y +Q FG
Sbjct: 35 INEAQRVKLSSP-----ERDVERDVFLYRAYLAQRKFG 67
>gi|40805827 epsilon subunit of coatomer protein complex isoform c
[Homo sapiens]
Length = 256
Score = 27.3 bits (59), Expect = 3.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 87 VNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
+N+ V +S+P E++ + D FLY Y +Q FG
Sbjct: 35 INEAQRVKLSSP-----ERDVERDVFLYRAYLAQRKFG 67
>gi|40805825 epsilon subunit of coatomer protein complex isoform b
[Homo sapiens]
Length = 257
Score = 27.3 bits (59), Expect = 3.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 87 VNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124
+N+ V +S+P E++ + D FLY Y +Q FG
Sbjct: 35 INEAQRVKLSSP-----ERDVERDVFLYRAYLAQRKFG 67
>gi|153791466 AMIGO protein [Homo sapiens]
Length = 493
Score = 27.3 bits (59), Expect = 3.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 93 VSVSTPIADIYEQEKDEDGFLYMVYASQETF 123
VSVS + +++Q + EDG +Y YA ETF
Sbjct: 318 VSVSKDGSLLFQQVQVEDGGVYTCYAMGETF 348
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 26.6 bits (57), Expect = 5.2
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 11 GKAAVDPADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKI 70
G+ A+ + +EV Q+R + K+ V IE + +KQL + +K K ++ ++ + V+
Sbjct: 2101 GEFALRLSSTQEEVHQLR-RGIEKLRVRIEADE-KKQLHIAEKLKERERENDSLKDKVEN 2158
Query: 71 IRRRLQLN-PTQAFFLLVNQHSMVSVSTPIADIYEQEK 107
+ R LQ++ Q +L ++S V T I E +
Sbjct: 2159 LERELQMSEENQELVILDAENSKAEVETLKTQIEEMAR 2196
>gi|7019323 dolichyl-phosphate beta-glucosyltransferase isoform 1
[Homo sapiens]
Length = 324
Score = 26.2 bits (56), Expect = 6.8
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 27 IRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLL 86
I D ++ V++ Y EK+LPV+ M E + + +R + +P + ++
Sbjct: 59 IWDSPTKQLSVVVPSYNEEKRLPVM------------MDEALSYLEKRQKRDPAFTYEVI 106
Query: 87 VNQHSMVSVSTPIADIYEQEKDED 110
V ++ +A Y Q+ D
Sbjct: 107 VVDDGSKDQTSKVAFKYCQKYGSD 130
>gi|50582996 multiple C2 domains, transmembrane 1 isoform S [Homo
sapiens]
Length = 778
Score = 26.2 bits (56), Expect = 6.8
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 10/52 (19%)
Query: 80 TQAFFLLVNQHSMVSVSTPIADIYEQEKDED----------GFLYMVYASQE 121
T +FL+++ T + D+ E E++ED GF+ +YA QE
Sbjct: 614 TWNYFLIISGKDNRQRDTVVEDMLEDEEEEDDKDDKDSEKKGFINKIYAIQE 665
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 26.2 bits (56), Expect = 6.8
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 10/52 (19%)
Query: 80 TQAFFLLVNQHSMVSVSTPIADIYEQEKDED----------GFLYMVYASQE 121
T +FL+++ T + D+ E E++ED GF+ +YA QE
Sbjct: 835 TWNYFLIISGKDNRQRDTVVEDMLEDEEEEDDKDDKDSEKKGFINKIYAIQE 886
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,476,499
Number of Sequences: 37866
Number of extensions: 169381
Number of successful extensions: 409
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 383
Number of HSP's gapped (non-prelim): 24
length of query: 125
length of database: 18,247,518
effective HSP length: 90
effective length of query: 35
effective length of database: 14,839,578
effective search space: 519385230
effective search space used: 519385230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.