| Name: TMEM40 | Sequence: fasta or formatted (233aa) | NCBI GI: 31542667 | |
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Description: transmembrane protein 40
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.7 11 1 C cysteine 0.9 2 1 D aspartate 6.4 15 2 E glutamate 6.9 16 1 F phenylalanine 5.6 13 2 G glycine 10.3 24 1 H histidine 3.4 8 1 I isoleucine 2.1 5 1 K lysine 3.9 9 2 L leucine 8.6 20 2 M methionine 0.9 2 1 N asparagine 2.1 5 1 P proline 4.3 10 1 Q glutamine 5.2 12 2 R arginine 5.6 13 3 S serine 16.3 38 21 T threonine 3.4 8 1 V valine 5.2 12 2 W tryptophan 0.4 1 1 Y tyrosine 3.9 9 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 transmembrane protein 40 SETD1A 0.058 SET domain containing 1A TNRC18 0.054 trinucleotide repeat containing 18 HRNR 0.054 hornerin ARL6IP4 0.052 SRp25 nuclear protein isoform 4 ARL6IP4 0.052 SRp25 nuclear protein isoform 3 ARL6IP4 0.052 SRp25 nuclear protein isoform 2 ARL6IP4 0.052 SRp25 nuclear protein isoform 1 ZCCHC10 0.049 zinc finger, CCHC domain containing 10 CHD9 0.049 chromodomain helicase DNA binding protein 9 PPRC1 0.047 peroxisome proliferator-activated receptor gamma, co... AP3B2 0.045 adaptor-related protein complex 3, beta 2 subunit [H... FLJ10404 0.045 hypothetical protein LOC54540 SRRM2 0.045 splicing coactivator subunit SRm300 CIR1 0.045 CBF1 interacting corepressor MLLT3 0.043 myeloid/lymphoid or mixed-lineage leukemia (trithor... DSPP 0.043 dentin sialophosphoprotein preproprotein FAM133B 0.043 hypothetical protein LOC257415 isoform 2 FAM133B 0.043 hypothetical protein LOC257415 isoform 1 TNKS 0.040 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... PPIG 0.040 peptidylprolyl isomerase G LOC100133142 0.038 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.038 PREDICTED: similar to zinc finger protein 208 [Homo... FAM133A 0.038 hypothetical protein LOC286499 LOC643446 0.038 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.038 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.038 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.038 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.038 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.038 PREDICTED: similar to ribonucleic acid binding prote...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
