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Search of human proteins with 31542306
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31542306 chromatin modifying protein 1B [Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31542306 chromatin modifying protein 1B [Homo sapiens] 379 e-105
gi|103485496 chromatin modifying protein 1A isoform 2 [Homo sapi... 211 3e-55
gi|38372933 chromatin modifying protein 2A [Homo sapiens] 92 3e-19
gi|7656922 chromatin modifying protein 2A [Homo sapiens] 92 3e-19
gi|40254866 chromatin modifying protein 2B [Homo sapiens] 65 4e-11
gi|7706353 vacuolar protein sorting 24 isoform 1 [Homo sapiens] 47 1e-05
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap... 42 3e-04
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi... 42 3e-04
gi|22748641 CHMP family, member 7 [Homo sapiens] 38 0.006
gi|198442834 coiled-coil domain containing 152 [Homo sapiens] 37 0.008
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap... 35 0.032
gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] 35 0.042
gi|113425119 PREDICTED: similar to golgi autoantigen, golgin sub... 35 0.055
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 34 0.072
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 34 0.072
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 34 0.094
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 33 0.12
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 33 0.12
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 33 0.16
gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens] 33 0.16
gi|188528616 testis specific, 10 [Homo sapiens] 33 0.21
gi|13376858 testis specific, 10 [Homo sapiens] 33 0.21
gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-l... 32 0.27
gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-l... 32 0.27
gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo s... 32 0.27
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi... 32 0.27
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 32 0.36
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 32 0.36
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 31 0.61
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 31 0.61
>gi|31542306 chromatin modifying protein 1B [Homo sapiens]
Length = 199
Score = 379 bits (972), Expect = e-105
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MSNMEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKN 60
MSNMEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKN
Sbjct: 1 MSNMEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKN 60
Query: 61 QAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEH 120
QAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEH
Sbjct: 61 QAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEH 120
Query: 121 QFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSV 180
QFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSV
Sbjct: 121 QFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSV 180
Query: 181 ASAEQDELSQRLARLRDQV 199
ASAEQDELSQRLARLRDQV
Sbjct: 181 ASAEQDELSQRLARLRDQV 199
>gi|103485496 chromatin modifying protein 1A isoform 2 [Homo
sapiens]
Length = 196
Score = 211 bits (538), Expect = 3e-55
Identities = 110/197 (55%), Positives = 153/197 (77%), Gaps = 4/197 (2%)
Query: 4 MEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAV 63
M+ LF LKF AK+L + AKK +K+ KAE+AK+KKA+ + N+E AR++AENAIR+KN+ V
Sbjct: 1 MDDTLFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGV 60
Query: 64 NFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFE 123
N+LRM++RVDAVA++VQTAVTM VTK+MA V K++D L TM+L+K+S++MD+FE Q +
Sbjct: 61 NWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQ 120
Query: 124 TLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAG---LDLNMELPQGQTGSVGTSV 180
LDV T MED+MSS TTLTTPQ QVD L+ ++A+E G LD +LP+G +VG S
Sbjct: 121 NLDVHTSVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG-ASAVGESS 179
Query: 181 ASAEQDELSQRLARLRD 197
+++D+LS+RLA LR+
Sbjct: 180 VRSQEDQLSRRLAALRN 196
>gi|38372933 chromatin modifying protein 2A [Homo sapiens]
Length = 222
Score = 92.0 bits (227), Expect = 3e-19
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 11 LKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSA 70
L A +EL R +K + +EK A IKK ++G M+ RI A++ +R + F+ M A
Sbjct: 22 LNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRA 81
Query: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQ 130
+ AV+ ++QT + + ++M GV K+M + + L +I +M +FE Q E +D++ +
Sbjct: 82 NIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEE 141
Query: 131 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQ-------------GQTGSVG 177
M D + + + D ++ ++ DE GL L EL G+
Sbjct: 142 MMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEAA 201
Query: 178 TSVASAEQDELSQRLARLR 196
S + +L +RL LR
Sbjct: 202 ASALADADADLEERLKNLR 220
>gi|7656922 chromatin modifying protein 2A [Homo sapiens]
Length = 222
Score = 92.0 bits (227), Expect = 3e-19
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 11 LKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSA 70
L A +EL R +K + +EK A IKK ++G M+ RI A++ +R + F+ M A
Sbjct: 22 LNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRA 81
Query: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQ 130
+ AV+ ++QT + + ++M GV K+M + + L +I +M +FE Q E +D++ +
Sbjct: 82 NIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEE 141
Query: 131 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQ-------------GQTGSVG 177
M D + + + D ++ ++ DE GL L EL G+
Sbjct: 142 MMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEAA 201
Query: 178 TSVASAEQDELSQRLARLR 196
S + +L +RL LR
Sbjct: 202 ASALADADADLEERLKNLR 220
>gi|40254866 chromatin modifying protein 2B [Homo sapiens]
Length = 213
Score = 65.1 bits (157), Expect = 4e-11
Identities = 37/190 (19%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 11 LKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSA 70
L+ + + R +K+EK + +IKK + GN E ++ A+ + + Q +S+
Sbjct: 21 LRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSS 80
Query: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQ 130
+V +++ + + + K+ +M+ K+M A K M+ +K M F+ + +++ +
Sbjct: 81 KVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEE 140
Query: 131 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTG-----SVGTSVASAEQ 185
+ DT+ + + + ++ ++ DE G++++ ++ + + S TS A+
Sbjct: 141 MINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD 200
Query: 186 DELSQRLARL 195
+E+ ++L L
Sbjct: 201 EEIERQLKAL 210
>gi|7706353 vacuolar protein sorting 24 isoform 1 [Homo sapiens]
Length = 222
Score = 47.0 bits (110), Expect = 1e-05
Identities = 38/192 (19%), Positives = 78/192 (40%), Gaps = 13/192 (6%)
Query: 18 LSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAA 77
+ R + +EE+ K +K A +KG +V + A+ IR + A +++V
Sbjct: 30 VDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLM 89
Query: 78 RVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMS 137
++ + + +V S+ + M A + + +I A M + + + + +EDT
Sbjct: 90 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFE 149
Query: 138 STTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSV------GTSVASAEQDE---- 187
S + + +M + + E + P T ++ G AS +++E
Sbjct: 150 SMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEEA 209
Query: 188 ---LSQRLARLR 196
+ RLA LR
Sbjct: 210 LEAMQSRLATLR 221
>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
sapiens]
Length = 603
Score = 42.4 bits (98), Expect = 3e-04
Identities = 40/194 (20%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 4 MEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARI-----HAENAIRQ 58
++ H+ LK + KE+ + ++ K E+A+ ++ ++K + EV + H + + +
Sbjct: 212 LKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHRVEE 271
Query: 59 KNQAVNFLR--MSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISAL-- 114
++++ L+ M+ + A V + V + + K + V + A ++ N + IS L
Sbjct: 272 LERSLSRLKNQMAEPLPPDAPAVSSEVELQDLRKELERVAGELQAQVE--NNQCISLLNR 329
Query: 115 --MDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQ 172
++ Q E L Q +++ + L PQ+ ++ L E L+ ++ Q +
Sbjct: 330 GQKERLREQEERLQEQQERLREREKRLQQLAEPQSDLEELKHENKSALQLEQQVKELQEK 389
Query: 173 TGSVGTSVASAEQD 186
G V ++ SAE++
Sbjct: 390 LGQVMETLTSAEKE 403
>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
sapiens]
Length = 603
Score = 42.4 bits (98), Expect = 3e-04
Identities = 40/194 (20%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 4 MEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARI-----HAENAIRQ 58
++ H+ LK + KE+ + ++ K E+A+ ++ ++K + EV + H + + +
Sbjct: 212 LKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHRVEE 271
Query: 59 KNQAVNFLR--MSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISAL-- 114
++++ L+ M+ + A V + V + + K + V + A ++ N + IS L
Sbjct: 272 LERSLSRLKNQMAEPLPPDAPAVSSEVELQDLRKELERVAGELQAQVE--NNQCISLLNR 329
Query: 115 --MDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQ 172
++ Q E L Q +++ + L PQ+ ++ L E L+ ++ Q +
Sbjct: 330 GQKERLREQEERLQEQQERLREREKRLQQLAEPQSDLEELKHENKSALQLEQQVKELQEK 389
Query: 173 TGSVGTSVASAEQD 186
G V ++ SAE++
Sbjct: 390 LGQVMETLTSAEKE 403
>gi|22748641 CHMP family, member 7 [Homo sapiens]
Length = 453
Score = 37.7 bits (86), Expect = 0.006
Identities = 32/167 (19%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 1 MSNMEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKN 60
+++++ ++ L + + LSR + +E + K + ++A + G ++A + + A ++
Sbjct: 234 VNDVDVGVYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLA-LRSLKAKQRTE 292
Query: 61 QAVNFLRMSA-RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFE 119
+ + L V + R+ + T V + V ++ ++K + +EK +L+D+ +
Sbjct: 293 KRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQ 352
Query: 120 HQFETLDVQTQQMEDTMSSTTTLTTP--QNQVDMLLQEMADEAGLDL 164
+T D +Q + +++ + + ++D+LLQ+ E LDL
Sbjct: 353 ELCDTQDEVSQTLAGGVTNGLDFDSEELEKELDILLQDTTKEP-LDL 398
>gi|198442834 coiled-coil domain containing 152 [Homo sapiens]
Length = 254
Score = 37.4 bits (85), Expect = 0.008
Identities = 18/66 (27%), Positives = 38/66 (57%)
Query: 16 KELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAV 75
KE+S+ + ++ + + K K+ I+K ME++ ++A+ ++K + +++ DA
Sbjct: 131 KEISKLYQDMQRKVELNEEKHKELIEKKEMEISELNAKLRSQEKEKQNEIIKLQLEFDAK 190
Query: 76 AARVQT 81
ARVQT
Sbjct: 191 LARVQT 196
>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
sapiens]
Length = 430
Score = 35.4 bits (80), Expect = 0.032
Identities = 39/201 (19%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 4 MEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARI-----HAENAIRQ 58
++ L LK + KE+ + + K E+A+ ++ ++K + EV + H + +
Sbjct: 15 LKAQLTQLKESLKEVQLERDEYAEHLKGERARWQQRMRKMSQEVCSLKKEKKHDKYRVET 74
Query: 59 KNQAVNFLR--MSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISAL-- 114
++++ L+ M+ + V + V + + K + V ++ A ++ ++IS L
Sbjct: 75 LERSLSKLKHQMAEPLPPEPPAVPSEVELQHLRKELERVAGALQAQVEYN--QRISLLNE 132
Query: 115 --MDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQ 172
++ Q E L Q +++ + L PQN L E L+ ++ Q +
Sbjct: 133 GQKERLREQEERLQEQQERLREQEERLQQLAEPQNSFKELNNENKSVLQLEQQVKELQEK 192
Query: 173 TGSVGTSVASAEQDELSQRLA 193
G AS ++ +L+ +L+
Sbjct: 193 LGKERLEAASQQKQQLTAQLS 213
>gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens]
Length = 636
Score = 35.0 bits (79), Expect = 0.042
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 17/188 (9%)
Query: 27 KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSAR------------VDA 74
KE +A KAK+ K +++ + R+ EN +K N + A A
Sbjct: 217 KENEALKAKLDKGLEQRDQAAERLREENLELKKLLMSNGNKEGASGRPGSPKMEGTGKKA 276
Query: 75 VAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMED 134
VA + Q +VT GKV + +A + ++ + +++ F ++ Q +Q
Sbjct: 277 VAGQQQASVTAGKVPEVVALGAAEKKVKMLEQQRSELLEVNKQWDQHFRSMKQQYEQKIT 336
Query: 135 TMSSTTTLTTPQNQV-DMLLQEMADEAGLDLNMELPQGQTGSVGT--SVASAEQDELSQR 191
+ L Q QV D+ + + D + L + + T +AE EL Q+
Sbjct: 337 ELRQ--KLADLQKQVTDLEAEREQKQRDFDRKLLLAKSKIEMEETDKEQLTAEAKELRQK 394
Query: 192 LARLRDQV 199
+ L+DQ+
Sbjct: 395 VKYLQDQL 402
>gi|113425119 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 2 [Homo sapiens]
Length = 631
Score = 34.7 bits (78), Expect = 0.055
Identities = 38/200 (19%), Positives = 85/200 (42%), Gaps = 12/200 (6%)
Query: 4 MEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENA----IRQK 59
++ L LK + ++L +C + + E+A+ + + K + E+ + E + Q
Sbjct: 220 LKAQLTQLKESFQQLQLERDECAEHIEGERARWHQRMSKMSQEICTLKKEKQDMRWVEQL 279
Query: 60 NQAVNFLRMSAR--VDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALM-- 115
+++ L+ + V + V + + K + V + + +K N + IS L
Sbjct: 280 EWSLSKLKNQTAEPLPPEPPAVPSEVELQHLRKELERVAGELQSQVK--NNQHISLLNRR 337
Query: 116 --DKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQT 173
++ Q E L Q +++++ L PQ+ + L E L+ ++ Q +
Sbjct: 338 QEERIREQEERLRKQEERLQEQHEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKL 397
Query: 174 GSVGTSVASAEQDELSQRLA 193
G VAS + +L+ +L+
Sbjct: 398 GEEHLEVASQQNQQLTAQLS 417
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 34.3 bits (77), Expect = 0.072
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 15 AKELSRSAKKCD------KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRM 68
A L S CD +EE+ KA++++A+ K N EVA+ R
Sbjct: 1336 AHALQSSRHDCDLLREQYEEEQESKAELQRALSKANTEVAQ----------------WRT 1379
Query: 69 SARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQ 128
DA +Q + + K +A +++ + ++ +N + S K Q E D+
Sbjct: 1380 KYETDA----IQRTEELEEAKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQNEVEDLM 1435
Query: 129 TQQMEDTMSSTTTLTTPQNQVDMLLQEMADEA-GLDLNMELPQGQTGSVGT---SVASAE 184
+E T ++ L Q D +L E + +E Q + S+GT + +A
Sbjct: 1436 L-DVERTNAACAALDKKQRNFDKILAEWKQKCEETHAELEASQKEARSLGTELFKIKNAY 1494
Query: 185 QDELSQ 190
++ L Q
Sbjct: 1495 EESLDQ 1500
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 34.3 bits (77), Expect = 0.072
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 15 AKELSRSAKKCD------KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRM 68
A L S CD +EE+ KA++++A+ K N EVA+ R
Sbjct: 1336 AHALQSSRHDCDLLREQYEEEQESKAELQRALSKANTEVAQ----------------WRT 1379
Query: 69 SARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQ 128
DA +Q + + K +A +++ + ++ +N + S K Q E D+
Sbjct: 1380 KYETDA----IQRTEELEEAKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQNEVEDLM 1435
Query: 129 TQQMEDTMSSTTTLTTPQNQVDMLLQEMADEA-GLDLNMELPQGQTGSVGT---SVASAE 184
+E T ++ L Q D +L E + +E Q + S+GT + +A
Sbjct: 1436 L-DVERTNAACAALDKKQRNFDKILAEWKQKCEETHAELEASQKEARSLGTELFKIKNAY 1494
Query: 185 QDELSQ 190
++ L Q
Sbjct: 1495 EESLDQ 1500
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 33.9 bits (76), Expect = 0.094
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 34/193 (17%)
Query: 15 AKELSRSAKKCD------KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRM 68
A L S CD +EE+ KA++++A+ K N EVA+ R
Sbjct: 1334 AHALQSSRHDCDLLREQYEEEQEAKAELQRALSKANSEVAQ----------------WRT 1377
Query: 69 SARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQ 128
DA +Q + + K +A ++ + +T N + S K Q E D+
Sbjct: 1378 KYETDA----IQRTEELEEAKKKLAQRLQEAEENTETANSKCASLEKTKQRLQGEVEDLM 1433
Query: 129 TQQMEDTMSSTTTLTTPQNQVDMLLQE---MADEAGLDLNMELPQGQTGSVGTSVASAEQ 185
+ +E + ++ TL Q D +L E DE+ +L E Q ++ S+ T +
Sbjct: 1434 -RDLERSHTACATLDKKQRNFDKVLAEWKQKLDESQAEL--EAAQKESRSLSTELFKMRN 1490
Query: 186 --DELSQRLARLR 196
+E+ +L LR
Sbjct: 1491 AYEEVVDQLETLR 1503
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 33.5 bits (75), Expect = 0.12
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 16 KELSRSAKKCDKEEKAEKAKIKKAIQKG-NMEVARIHAE--NAIRQKNQAVNFLRMSARV 72
+++ + D+ +K E K++K + + + RIHAE N+++ N VN R +
Sbjct: 320 EQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIKNSLKIDNLDVN--RCIEAL 377
Query: 73 DAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQF---ETLDVQT 129
D +A+ T K T+ + + K + + +EK + L +KF++ F E V T
Sbjct: 378 DELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVIT 437
Query: 130 QQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQD 186
Q + +++ Q Q + + D+ N +L + QTGS + S QD
Sbjct: 438 QVLNKSLAE-------QRQHEE-ANKTKDQGKKGPNKKLEKEQTGSKTLNGGSDAQD 486
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 33.5 bits (75), Expect = 0.12
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 16 KELSRSAKKCDKEEKAEKAKIKKAIQKG-NMEVARIHAE--NAIRQKNQAVNFLRMSARV 72
+++ + D+ +K E K++K + + + RIHAE N+++ N VN R +
Sbjct: 320 EQMETEQQNKDEGKKPEVKKVEKKRETSMDSRLQRIHAEIKNSLKIDNLDVN--RCIEAL 377
Query: 73 DAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQF---ETLDVQT 129
D +A+ T K T+ + + K + + +EK + L +KF++ F E V T
Sbjct: 378 DELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVIT 437
Query: 130 QQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQD 186
Q + +++ Q Q + + D+ N +L + QTGS + S QD
Sbjct: 438 QVLNKSLAE-------QRQHEE-ANKTKDQGKKGPNKKLEKEQTGSKTLNGGSDAQD 486
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 33.1 bits (74), Expect = 0.16
Identities = 36/170 (21%), Positives = 77/170 (45%), Gaps = 30/170 (17%)
Query: 15 AKELSRSAKKCD------KEEKAEKAKIKKAIQKGNMEVARIHAE---NAIR-------- 57
A L S CD +EE+ KA++++A+ K N EVA+ + +AI+
Sbjct: 1331 AHALQSSRHDCDLLREQYEEEQEGKAELQRALSKANSEVAQWRTKYETDAIQRTEELEEA 1390
Query: 58 QKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDK 117
+K A +V+AV A+ ++ K + + G V+ + ++ N ++A +DK
Sbjct: 1391 KKKLAQRLQDSEEQVEAVNAK---CASLEKTKQRLQGEVEDLMVDVERAN--SLAAALDK 1445
Query: 118 FEHQFETL--------DVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADE 159
+ F+ + + ++E ++ + +L+T ++ +E D+
Sbjct: 1446 KQRNFDKVLAEWKTKCEESQAELEASLKESRSLSTELFKLKNAYEEALDQ 1495
>gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]
Length = 775
Score = 33.1 bits (74), Expect = 0.16
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 10 NLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRM- 68
+L +E SR ++K K ++ A K E AR+ E Q+ A R+
Sbjct: 171 SLATVTQEKSRMEASYLADKKKMKQDLEDASNKAEEERARLEGELKGLQEQIAETKARLI 230
Query: 69 SARVDAVAARVQTAVTMGKVTKSMAGV-VKSMDATLKTMNLEKISALMDKFEHQFETLDV 127
+ + D + A+ + ++ K + + D L+ + A Q E ++
Sbjct: 231 TQQHDRAQEQSDHALMLRELQKLLQEERTQRQDLELRLEETREALAGRAYAAEQMEGFEL 290
Query: 128 QTQQM----EDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASA 183
QT+Q+ E+ S + +NQ D LQE+ +EA + Q Q T++A
Sbjct: 291 QTKQLTREVEELKSELQAIRDEKNQPDPRLQELQEEAARLKSHFQAQLQQEMRKTALAED 350
Query: 184 EQDELS----QRLARLRDQV 199
+ + S QR+A L +Q+
Sbjct: 351 QLRQQSQVEEQRVAALENQI 370
>gi|188528616 testis specific, 10 [Homo sapiens]
Length = 698
Score = 32.7 bits (73), Expect = 0.21
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 27 KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFL------------RMSARVDA 74
K E++E ++ + ++K N + + EN RQ N L R+ +VD+
Sbjct: 404 KSEESENRQMMEQLRKANEDAE--NWENKARQSEADNNTLKLELITAEAEGNRLKEKVDS 461
Query: 75 VAARVQTAVTMGKVTKSMAGV----VKSMDATLKTMNLEKISALMD---------KFEHQ 121
+ V+ + + KS V M+ L+ + EK+SAL D K +
Sbjct: 462 LNREVEQHLNAERSYKSQISTLHKSVVKMEEELQKVQFEKVSALADLSSTRELCIKLDSS 521
Query: 122 FETLDVQ-TQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNME 167
E L+ Q + ++ L + +++++L +MA+E N+E
Sbjct: 522 KELLNRQLVAKDQEIEMRENELDSAHSEIELLRSQMANERISMQNLE 568
>gi|13376858 testis specific, 10 [Homo sapiens]
Length = 698
Score = 32.7 bits (73), Expect = 0.21
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 27 KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFL------------RMSARVDA 74
K E++E ++ + ++K N + + EN RQ N L R+ +VD+
Sbjct: 404 KSEESENRQMMEQLRKANEDAE--NWENKARQSEADNNTLKLELITAEAEGNRLKEKVDS 461
Query: 75 VAARVQTAVTMGKVTKSMAGV----VKSMDATLKTMNLEKISALMD---------KFEHQ 121
+ V+ + + KS V M+ L+ + EK+SAL D K +
Sbjct: 462 LNREVEQHLNAERSYKSQISTLHKSVVKMEEELQKVQFEKVSALADLSSTRELCIKLDSS 521
Query: 122 FETLDVQ-TQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNME 167
E L+ Q + ++ L + +++++L +MA+E N+E
Sbjct: 522 KELLNRQLVAKDQEIEMRENELDSAHSEIELLRSQMANERISMQNLE 568
>gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 547
Score = 32.3 bits (72), Expect = 0.27
Identities = 39/197 (19%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 4 MEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARI-----HAENAIRQ 58
++ L LK + KE+ + + K E+A+ ++ ++K + EV + H + +
Sbjct: 233 LKAQLTQLKESLKEVQLERDEYAEHLKGERARWQQRMRKMSQEVCSLKKEKKHDKYRVET 292
Query: 59 KNQAVNFLR--MSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMD 116
++++ L+ M+ + V + + + K + V ++ A ++ ++IS L
Sbjct: 293 LERSLSKLKNQMAEPLPPEPPAVPSEAELQHLRKELERVAGALQAQVEYN--QRISLLN- 349
Query: 117 KFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSV 176
E Q E L Q +++ + L PQN L E L+ ++ Q + G
Sbjct: 350 --EGQKERLREQQERLPEQEERLQQLAEPQNSFKELNNENKSVLQLEQQVKELQEKLGKE 407
Query: 177 GTSVASAEQDELSQRLA 193
AS ++ +L+ +L+
Sbjct: 408 RLEAASQQKQQLTAQLS 424
>gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 629
Score = 32.3 bits (72), Expect = 0.27
Identities = 39/197 (19%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 4 MEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARI-----HAENAIRQ 58
++ L LK + KE+ + + K E+A+ ++ ++K + EV + H + +
Sbjct: 224 LKAQLTQLKESLKEVQLERDEYAEHLKGERARWQQRMRKMSQEVCSLKKEKKHDKYRVET 283
Query: 59 KNQAVNFLR--MSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMD 116
++++ L+ M+ + V + + + K + V ++ A ++ ++IS L
Sbjct: 284 LERSLSKLKNQMAEPLPPEPPAVPSEAELQHLRKELERVAGALQAQVEYN--QRISLLN- 340
Query: 117 KFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSV 176
E Q E L Q +++ + L PQN L E L+ ++ Q + G
Sbjct: 341 --EGQKERLREQQERLPEQEERLQQLAEPQNSFKELNNENKSVLQLEQQVKELQEKLGKE 398
Query: 177 GTSVASAEQDELSQRLA 193
AS ++ +L+ +L+
Sbjct: 399 RLEAASQQKQQLTAQLS 415
>gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo
sapiens]
Length = 805
Score = 32.3 bits (72), Expect = 0.27
Identities = 30/155 (19%), Positives = 65/155 (41%), Gaps = 24/155 (15%)
Query: 1 MSNMEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKN 60
+ N + + + A E++ ++CDKE K K ++ K I E AR ++ +
Sbjct: 519 IDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEI-----EAARRQFQSQLADLQ 573
Query: 61 QAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVV-KSMDATLKTMNLEKISALMDKFE 119
Q + L++ T + + + G K++D T IS L + E
Sbjct: 574 QLPDILKI------------TEAKLAECQDQLQGYERKNIDLT------AIISDLRSRIE 615
Query: 120 HQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQ 154
HQ + L++ ++ + + L+ ++++ L+
Sbjct: 616 HQGDKLEMAREKHQASQKENKQLSLKVDELERKLE 650
>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
sapiens]
Length = 434
Score = 32.3 bits (72), Expect = 0.27
Identities = 40/205 (19%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 4 MEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARI-----HAENAIRQ 58
++ L LK + KE+ + + K E+A+ ++ ++K + EV + H + + +
Sbjct: 15 LKAQLTQLKESLKEVQLERDEYAEHLKGERARWQQRMRKMSQEVCSLKKEKKHDKYRVEK 74
Query: 59 KNQAVNFLR--MSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISAL-- 114
++++ L+ M+ + V + V + + K + V + A ++ ++IS L
Sbjct: 75 LERSLSKLKHQMAEPLPPEPPAVPSEVELQHLRKELERVAGELQAQVEYN--QRISLLNE 132
Query: 115 --MDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQ 172
++ Q E L Q +++ + L PQN L E L+ ++ Q +
Sbjct: 133 GQKERLREQEERLQEQQERLPEQEERLQQLAEPQNSFKELNNENKSVLQLEQQVKELQEK 192
Query: 173 TGSVGTS----VASAEQDELSQRLA 193
G V + AS ++ +L+ +L+
Sbjct: 193 LGKVKETERLEAASQQKQQLTAQLS 217
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 32.0 bits (71), Expect = 0.36
Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 57 RQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKT--MNLEKISAL 114
R ++ AV + + Q + + KS+ VK ++ TL+ +E +
Sbjct: 1395 RTESIAVQAENLVKEASEIPLGPQNKQLLQQQAKSIKEQVKKLEDTLEEDIKTMEMVKTK 1454
Query: 115 MDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ----NQVDMLLQEMADEAGLDLNMELPQ 170
D F FETL V + E +++ T ++ +Q+ + +QE+ + + +E
Sbjct: 1455 WDHFGSNFETLSVWITEKEKELNALETSSSAMDMQISQIKVTIQEIESKLSSIVGLE--- 1511
Query: 171 GQTGSVGTSVASAEQDELSQRLARLR 196
+ S V + E + +L ++R
Sbjct: 1512 EEAQSFAQFVTTGESARIKAKLTQIR 1537
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 32.0 bits (71), Expect = 0.36
Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 57 RQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKT--MNLEKISAL 114
R ++ AV + + Q + + KS+ VK ++ TL+ +E +
Sbjct: 1388 RTESIAVQAENLVKEASEIPLGPQNKQLLQQQAKSIKEQVKKLEDTLEEDIKTMEMVKTK 1447
Query: 115 MDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ----NQVDMLLQEMADEAGLDLNMELPQ 170
D F FETL V + E +++ T ++ +Q+ + +QE+ + + +E
Sbjct: 1448 WDHFGSNFETLSVWITEKEKELNALETSSSAMDMQISQIKVTIQEIESKLSSIVGLE--- 1504
Query: 171 GQTGSVGTSVASAEQDELSQRLARLR 196
+ S V + E + +L ++R
Sbjct: 1505 EEAQSFAQFVTTGESARIKAKLTQIR 1530
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 31.2 bits (69), Expect = 0.61
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 35/212 (16%)
Query: 16 KELSRSAKKCDKEEKAEKAKIKKAIQKGN---MEVARIHAE-----NAIRQKNQAVNF-- 65
+ELS+ D+ K ++ K+K +G E R+ A+ + QK QA
Sbjct: 1552 EELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYK 1611
Query: 66 LRMSARVDAVAARVQTAVTMGKVTKSMAGVVKS---------------MDATLKTMNLEK 110
L+M A+ Q + + +S+ + K A LKT E+
Sbjct: 1612 LQMEKAKTHYDAKKQQNQELQEQLRSLEQLQKENKELRAEAERLGHELQQAGLKTKEAEQ 1671
Query: 111 ----ISALMDKFEHQFETLDVQTQQM------EDTMSSTTTLTTPQNQVDMLLQEMADEA 160
++A + E Q D Q + + D + S PQ + + +++ E
Sbjct: 1672 TCRHLTAQVRSLEAQVAHADQQLRDLGKFQVATDALKSREPQAKPQLDLSIDSLDLSCEE 1731
Query: 161 GLDLNMELPQGQTGSVGTSVASAEQDELSQRL 192
G L++ +T GTSV +SQRL
Sbjct: 1732 GTPLSITSKLPRTQPDGTSVPGEPASPISQRL 1763
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 31.2 bits (69), Expect = 0.61
Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 31/186 (16%)
Query: 15 AKELSRSAKKCD------KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRM 68
A L S CD +EE+ KA++++A+ K N EVA+ R
Sbjct: 1334 AHALQSSRHDCDLLREQYEEEQEAKAELQRAMSKANSEVAQ----------------WRT 1377
Query: 69 SARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQ 128
DA +Q + + K +A ++ + ++ +N + S K Q E D+
Sbjct: 1378 KYETDA----IQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLM 1433
Query: 129 TQQMEDTMSSTTTLTTPQNQVDMLLQEMADEA-GLDLNMELPQGQTGSVGT---SVASAE 184
+E T ++ L Q D +L E + +E Q ++ S+ T + +A
Sbjct: 1434 I-DVERTNAACAALDKKQRNFDKILAEWKQKCEETHAELEASQKESRSLSTELFKIKNAY 1492
Query: 185 QDELSQ 190
++ L Q
Sbjct: 1493 EESLDQ 1498
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.121 0.309
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,081,736
Number of Sequences: 37866
Number of extensions: 166632
Number of successful extensions: 926
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 862
Number of HSP's gapped (non-prelim): 136
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.