Guide to the Human Genome
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Name: NRBP2 Sequence: fasta or formatted (258aa) NCBI GI: 30794272
Description:

nuclear receptor binding protein 2

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         23           2
 C cysteine            1.9          5           2
 D aspartate           5.4         14           2
 E glutamate           8.9         23           2
 F phenylalanine       4.3         11           1
 G glycine             1.9          5           1
 H histidine           4.3         11           1
 I isoleucine          2.3          6           1
 K lysine              3.9         10           1
 L leucine            14.7         38           3
 M methionine          3.5          9           1
 N asparagine          2.3          6           1
 P proline             7.0         18           3
 Q glutamine           3.9         10           1
 R arginine            8.5         22           2
 S serine              4.7         12           1
 T threonine           5.0         13           1
 V valine              5.4         14           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor binding protein 2 
NRBP1                 0.480   nuclear receptor binding protein 
OXSR1                 0.022   oxidative-stress responsive 1 
LMOD3                 0.018   leiomodin 3 (fetal) 
TTK                   0.014   TTK protein kinase 
MST4                  0.014   serine/threonine protein kinase MST4 isoform 2 [Hom...
MST4                  0.014   serine/threonine protein kinase MST4 isoform 1 [Homo...
STRADA                0.014   protein kinase LYK5 isoform 4 
STRADA                0.014   protein kinase LYK5 isoform 1 
STRADA                0.014   protein kinase LYK5 isoform 2 
YSK4                  0.012   Yeast Sps1/Ste20-related kinase 4 isoform 1 
YSK4                  0.012   Yeast Sps1/Ste20-related kinase 4 isoform 2 
STRADB                0.012   STE20-related kinase adaptor beta 
STK24                 0.010   serine/threonine kinase 24 isoform b 
STK24                 0.010   serine/threonine kinase 24 isoform a 
STK25                 0.010   serine/threonine kinase 25 
ACPL2                 0.010   acid phosphatase-like 2 
ACPL2                 0.010   acid phosphatase-like 2 
ABCB9                 0.010   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.010   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.010   ATP-binding cassette, sub-family B (MDR/TAP), member...
MAP3K8                0.010   mitogen-activated protein kinase kinase kinase 8 [Ho...
LOC645529             0.010   PREDICTED: similar to Putative acrosin-like proteas...
ACR                   0.010   acrosin precursor 
C9orf78               0.010   chromosome 9 open reading frame 78 
GABRQ                 0.008   gamma-aminobutyric acid (GABA) receptor, theta precur...
WNK3                  0.008   WNK lysine deficient protein kinase 3 isoform 1 [Hom...
WNK3                  0.008   WNK lysine deficient protein kinase 3 isoform 2 [Hom...
FICD                  0.006   Huntingtin interacting protein E 
LOC389217             0.006   PREDICTED: similar to SET translocation 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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