Guide to the Human Genome
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Name: CPNE2 Sequence: fasta or formatted (548aa) NCBI GI: 30181236
Description:

copine II

Referenced in:

Calmodulin and Calcium

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         41           2
 C cysteine            2.2         12           1
 D aspartate           7.1         39           2
 E glutamate           4.7         26           2
 F phenylalanine       6.2         34           1
 G glycine             6.4         35           2
 H histidine           2.2         12           1
 I isoleucine          6.2         34           3
 K lysine              6.0         33           3
 L leucine             8.4         46           4
 M methionine          2.6         14           1
 N asparagine          4.7         26           2
 P proline             6.0         33           2
 Q glutamine           4.4         24           2
 R arginine            4.0         22           2
 S serine              6.8         37           2
 T threonine           4.6         25           1
 V valine              6.0         33           2
 W tryptophan          0.9          5           1
 Y tyrosine            3.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   copine II 
CPNE3                 0.638   copine III 
CPNE1                 0.580   copine I isoform a 
CPNE1                 0.580   copine I isoform a 
CPNE1                 0.580   copine I isoform a 
CPNE1                 0.580   copine I isoform a 
CPNE1                 0.580   copine I isoform a 
CPNE1                 0.580   copine I isoform a 
CPNE1                 0.580   copine I isoform a 
CPNE1                 0.580   copine I isoform b 
CPNE7                 0.522   copine 7 isoform a 
CPNE4                 0.507   copine IV 
CPNE8                 0.475   copine VIII 
CPNE6                 0.474   copine 6 
CPNE5                 0.460   copine V 
CPNE9                 0.444   copine-like protein 
CPNE7                 0.436   copine 7 isoform b 
UNC13C                0.026   unc-13 homolog C 
SYT2                  0.026   synaptotagmin II 
SYT2                  0.026   synaptotagmin II 
SYT1                  0.026   synaptotagmin I 
SYT1                  0.026   synaptotagmin I 
SYT1                  0.026   synaptotagmin I 
RASAL1                0.026   RAS protein activator like 1 
PRKCG                 0.022   protein kinase C, gamma 
LOC100132214          0.021   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.021   PREDICTED: similar to calcium-promoted Ras inactiva...
UNC13B                0.021   UNC13 (C. elegans)-like 
RASA4                 0.021   RAS p21 protein activator 4 isoform 2 
RASA4                 0.021   RAS p21 protein activator 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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