ACTL6A 25160

Name: ACTL6A	Sequence: fasta or formatted (387aa)		NCBI GI: 30089997
Description: actin-like 6A isoform 2		Referenced in: Actin and Related Proteins
Other entries for this name: alt mRNA [387aa] actin-like 6A isoform 2 alt prot [429aa] actin-like 6A isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 23 2 C cysteine 2.1 8 1 D aspartate 4.9 19 2 E glutamate 6.7 26 2 F phenylalanine 3.6 14 2 G glycine 7.5 29 2 H histidine 2.3 9 1 I isoleucine 5.4 21 1 K lysine 5.2 20 1 L leucine 7.8 30 1 M methionine 4.1 16 1 N asparagine 4.7 18 2 P proline 5.2 20 2 Q glutamine 4.7 18 2 R arginine 4.7 18 2 S serine 7.2 28 2 T threonine 6.5 25 2 V valine 7.0 27 2 W tryptophan 1.6 6 1 Y tyrosine 3.1 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actin-like 6A isoform 2 ACTL6A 1.000 actin-like 6A isoform 2 ACTL6A 1.000 actin-like 6A isoform 1 ACTL6B 0.846 actin-like 6B ACTC1 0.266 cardiac muscle alpha actin 1 proprotein ACTA1 0.265 actin, alpha 1, skeletal muscle ACTA2 0.263 alpha 2 actin ACTA2 0.263 alpha 2 actin ACTB 0.263 beta actin ACTG1 0.263 actin, gamma 1 propeptide ACTG2 0.261 actin, gamma 2 propeptide ACTBL2 0.258 actin, beta-like 2 ACTBL3 0.240 PREDICTED: actin, beta-like 3 ACTBL3 0.240 PREDICTED: kappa-actin ACTBL3 0.236 PREDICTED: actin, beta-like 3 LOC653781 0.233 PREDICTED: similar to protein expressed in prostate... LOC653269 0.233 PREDICTED: similar to protein expressed in prostate... LOC653269 0.233 PREDICTED: similar to protein expressed in prostate,... POTEF 0.232 prostate, ovary, testis expressed protein on chromo... POTEE 0.231 protein expressed in prostate, ovary, testis, and p... ACTR1B 0.224 ARP1 actin-related protein 1 homolog B, centractin b... ACTR1A 0.215 ARP1 actin-related protein 1 homolog A, centractin al... ACTRT2 0.192 actin-related protein M2 ACTRT1 0.186 actin-related protein T1 ARPM1 0.180 actin related protein M1 ACTL9 0.179 actin-like 9 ACTL7B 0.172 actin-like 7B ACTL7A 0.163 actin-like 7A ACTR3B 0.159 actin-related protein 3-beta isoform 1 LOC100128069 0.155 PREDICTED: similar to alpha actin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.