ACTB 28219

Name: ACTB	Sequence: fasta or formatted (375aa)		NCBI GI: 4501885
Description: beta actin		Referenced in: Actin and Related Proteins Comparative Genomics
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 29 2 C cysteine 1.6 6 1 D aspartate 6.1 23 3 E glutamate 6.9 26 2 F phenylalanine 3.5 13 1 G glycine 7.5 28 2 H histidine 2.4 9 2 I isoleucine 7.5 28 2 K lysine 5.1 19 1 L leucine 7.2 27 2 M methionine 4.5 17 1 N asparagine 2.4 9 1 P proline 5.1 19 2 Q glutamine 3.2 12 2 R arginine 4.8 18 1 S serine 6.7 25 4 T threonine 6.9 26 3 V valine 5.9 22 2 W tryptophan 1.1 4 1 Y tyrosine 4.0 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 beta actin ACTG1 0.993 actin, gamma 1 propeptide ACTA2 0.952 alpha 2 actin ACTA2 0.952 alpha 2 actin ACTC1 0.950 cardiac muscle alpha actin 1 proprotein ACTG2 0.947 actin, gamma 2 propeptide ACTA1 0.947 actin, alpha 1, skeletal muscle ACTBL2 0.935 actin, beta-like 2 POTEE 0.924 protein expressed in prostate, ovary, testis, and p... ACTBL3 0.922 PREDICTED: actin, beta-like 3 ACTBL3 0.922 PREDICTED: kappa-actin LOC653269 0.918 PREDICTED: similar to protein expressed in prostate... LOC653269 0.918 PREDICTED: similar to protein expressed in prostate,... ACTBL3 0.918 PREDICTED: actin, beta-like 3 POTEF 0.916 prostate, ovary, testis expressed protein on chromo... LOC653781 0.910 PREDICTED: similar to protein expressed in prostate... ACTR1B 0.553 ARP1 actin-related protein 1 homolog B, centractin b... ACTR1A 0.544 ARP1 actin-related protein 1 homolog A, centractin al... ARPM1 0.497 actin related protein M1 LOC100128069 0.477 PREDICTED: similar to alpha actin ACTRT1 0.477 actin-related protein T1 ACTRT2 0.473 actin-related protein M2 LOC100128069 0.462 PREDICTED: similar to Actin, alpha 1, skeletal musc... ACTR2 0.458 actin-related protein 2 isoform b ACTR2 0.452 actin-related protein 2 isoform a ACTL7A 0.416 actin-like 7A ACTL7B 0.405 actin-like 7B ACTL9 0.383 actin-like 9 ACTL6B 0.311 actin-like 6B ACTR3B 0.309 actin-related protein 3-beta isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.