Guide to the Human Genome
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Name: TMEM202 Sequence: fasta or formatted (273aa) NCBI GI: 122937323
Description:

transmembrane protein 202

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         12           1
 C cysteine            3.3          9           1
 D aspartate           2.6          7           1
 E glutamate           4.4         12           1
 F phenylalanine       4.0         11           2
 G glycine             4.4         12           1
 H histidine           2.9          8           1
 I isoleucine          4.8         13           2
 K lysine              4.0         11           2
 L leucine            14.3         39           3
 M methionine          3.7         10           1
 N asparagine          4.0         11           1
 P proline             5.5         15           2
 Q glutamine           3.3          9           3
 R arginine            5.1         14           2
 S serine             10.3         28           2
 T threonine           6.6         18           2
 V valine              5.1         14           1
 W tryptophan          3.7         10           2
 Y tyrosine            3.7         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 202 
LIM2                  0.044   lens intrinsic membrane protein 2, 19kDa isoform 2 ...
LOC100294023          0.033   PREDICTED: hypothetical protein 
LOC100290508          0.033   PREDICTED: hypothetical protein XP_002346946 
LOC100289187          0.033   PREDICTED: hypothetical protein XP_002342783 
LOC100289187          0.033   PREDICTED: hypothetical protein 
EMP1                  0.020   epithelial membrane protein 1 
LIM2                  0.018   lens intrinsic membrane protein 2, 19kDa isoform 1 [...
FBRS                  0.013   fibrosin 
ODF4                  0.011   outer dense fiber of sperm tails 4 
FBXO16                0.011   F-box only protein 16 
TMEM225               0.007   transmembrane protein 225 
CLDND2                0.007   claudin domain containing 2 
HISPPD2A              0.007   histidine acid phosphatase domain containing 2A iso...
HISPPD2A              0.007   histidine acid phosphatase domain containing 2A iso...
HISPPD2A              0.007   histidine acid phosphatase domain containing 2A isof...
NKG7                  0.007   natural killer cell group 7 sequence 
TMEM45B               0.006   transmembrane protein 45B 
DPCR1                 0.006   diffuse panbronchiolitis critical region 1 protein ...
TXNDC2                0.006   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.006   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.006   thioredoxin domain-containing 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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