Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IL28RA Sequence: fasta or formatted (244aa) NCBI GI: 28416911
Description:

interleukin 28 receptor, alpha isoform 3

Referenced in:

Interferon
Interleukins and Their Receptors

Other entries for this name:
alt prot [520aa] interleukin 28 receptor, alpha isoform 1
alt prot [491aa] interleukin 28 receptor, alpha isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         15           2
 C cysteine            3.3          8           1
 D aspartate           1.6          4           1
 E glutamate           6.6         16           2
 F phenylalanine       4.1         10           1
 G glycine             4.9         12           1
 H histidine           1.6          4           2
 I isoleucine          1.2          3           1
 K lysine              4.9         12           2
 L leucine            12.3         30           3
 M methionine          1.6          4           2
 N asparagine          2.9          7           1
 P proline            10.7         26           2
 Q glutamine           5.3         13           2
 R arginine            4.9         12           3
 S serine              7.0         17           2
 T threonine           7.4         18           1
 V valine              7.0         17           1
 W tryptophan          2.5          6           1
 Y tyrosine            4.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 28 receptor, alpha isoform 3 
IL28RA                0.910   interleukin 28 receptor, alpha isoform 1 
IL28RA                0.910   interleukin 28 receptor, alpha isoform 2 
IL22RA2               0.078   interleukin 22-binding protein isoform 2 
IL22RA2               0.061   interleukin 22-binding protein isoform 3 
IL20RA                0.061   interleukin 20 receptor, alpha 
IL22RA2               0.055   interleukin 22-binding protein isoform 1 
IL20RB                0.039   interleukin 20 receptor beta precursor 
IFNAR1                0.027   interferon-alpha receptor 1 precursor 
IL10RB                0.025   interleukin 10 receptor, beta precursor 
LOC100293282          0.018   PREDICTED: hypothetical protein 
LOC100289818          0.018   PREDICTED: hypothetical protein XP_002347476 
SDK1                  0.016   sidekick 1 
BOC                   0.014   brother of CDO 
ROBO4                 0.014   roundabout homolog 4, magic roundabout 
ZNF385C               0.014   PREDICTED: zinc finger protein 385C 
ZNF385C               0.014   PREDICTED: zinc finger protein 385C 
ZNF385C               0.014   PREDICTED: zinc finger protein 385C 
DSCAML1               0.014   Down syndrome cell adhesion molecule like 1 
IL22RA1               0.012   interleukin 22 receptor, alpha 1 
SLC1A7                0.012   solute carrier family 1 (glutamate transporter), me...
IL5RA                 0.012   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL5RA                 0.012   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.012   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.012   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.012   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.012   interleukin 5 receptor, alpha isoform 2 precursor [H...
C2                    0.010   complement component 2 isoform 1 preproprotein [Homo...
PTPRD                 0.010   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.010   protein tyrosine phosphatase, receptor type, D isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press