Guide to the Human Genome
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Name: PPP4R2 Sequence: fasta or formatted (417aa) NCBI GI: 28372531
Description:

protein phosphatase 4, regulatory subunit 2

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9         12           1
 C cysteine            1.7          7           1
 D aspartate           6.5         27           2
 E glutamate          15.6         65           6
 F phenylalanine       3.1         13           1
 G glycine             4.8         20           1
 H histidine           1.4          6           1
 I isoleucine          2.6         11           1
 K lysine              6.2         26           2
 L leucine             5.3         22           2
 M methionine          3.4         14           1
 N asparagine          6.2         26           2
 P proline             5.5         23           2
 Q glutamine           3.4         14           2
 R arginine            5.0         21           2
 S serine             12.2         51           5
 T threonine           6.5         27           2
 V valine              6.2         26           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 4, regulatory subunit 2 
DSPP                  0.047   dentin sialophosphoprotein preproprotein 
YTHDC1                0.041   splicing factor YT521-B isoform 2 
YTHDC1                0.041   splicing factor YT521-B isoform 1 
DMP1                  0.038   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.038   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
SRCAP                 0.038   Snf2-related CBP activator protein 
SETD1B                0.037   SET domain containing 1B 
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
LEO1                  0.037   Leo1, Paf1/RNA polymerase II complex component, homo...
HTATSF1               0.036   HIV-1 Tat specific factor 1 
HTATSF1               0.036   HIV-1 Tat specific factor 1 
CDC2L2                0.036   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.036   cell division cycle 2-like 2 isoform 1 
SETD1A                0.036   SET domain containing 1A 
CDC2L1                0.036   cell division cycle 2-like 1 (PITSLRE proteins) isof...
IWS1                  0.036   IWS1 homolog 
RPGR                  0.035   retinitis pigmentosa GTPase regulator isoform C [Hom...
DNMT1                 0.033   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
ATRX                  0.033   transcriptional regulator ATRX isoform 2 
ATRX                  0.033   transcriptional regulator ATRX isoform 1 
CYLC1                 0.033   cylicin, basic protein of sperm head cytoskeleton 1...
NCL                   0.033   nucleolin 
MYT1                  0.032   myelin transcription factor 1 
LOC283767             0.031   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.031   PREDICTED: hypothetical protein LOC645202 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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