Guide to the Human Genome
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Name: C3orf33 Sequence: fasta or formatted (251aa) NCBI GI: 27734925
Description:

hypothetical protein LOC285315

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         10           1
 C cysteine            0.8          2           1
 D aspartate           2.8          7           1
 E glutamate           8.8         22           2
 F phenylalanine       4.0         10           1
 G glycine             6.4         16           2
 H histidine           0.8          2           1
 I isoleucine          7.6         19           2
 K lysine             12.0         30           2
 L leucine            15.1         38           3
 M methionine          1.2          3           1
 N asparagine          4.0         10           2
 P proline             2.0          5           1
 Q glutamine           1.2          3           1
 R arginine            7.6         19           2
 S serine              8.0         20           3
 T threonine           4.4         11           2
 V valine              3.6          9           1
 W tryptophan          2.8          7           1
 Y tyrosine            3.2          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC285315 
IL12B                 0.015   interleukin 12B precursor 
LONP1                 0.011   mitochondrial lon peptidase 1 
NEB                   0.011   nebulin 
LOC440243             0.008   PREDICTED: Putative golgin subfamily A member 6-lik...
CCDC70                0.008   coiled-coil domain containing 70 precursor 
LOC283685             0.006   PREDICTED: golgi autoantigen, golgin subfamily a-li...
SDSL                  0.006   serine dehydratase-like 
PALM2                 0.006   paralemmin 2 isoform b 
PALM2                 0.006   paralemmin 2 isoform a 
PALM2-AKAP2           0.006   PALM2-AKAP2 protein isoform 2 
PALM2-AKAP2           0.006   PALM2-AKAP2 protein isoform 1 
LOC727832             0.006   golgi autoantigen, golgin subfamily a-like 
LAMA1                 0.006   laminin, alpha 1 precursor 
LOC283685             0.006   PREDICTED: golgi autoantigen, golgin subfamily a-li...
EIF5B                 0.006   eukaryotic translation initiation factor 5B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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