Guide to the Human Genome
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Name: CAMKK1 Sequence: fasta or formatted (505aa) NCBI GI: 27437011
Description:

calcium/calmodulin-dependent protein kinase 1 alpha isoform a

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt mRNA [505aa] calcium/calmodulin-dependent protein kinase 1 alpha isoform a
alt prot [520aa] calcium/calmodulin-dependent protein kinase 1 alpha isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         40           2
 C cysteine            1.6          8           2
 D aspartate           5.3         27           2
 E glutamate           9.3         47           3
 F phenylalanine       2.8         14           1
 G glycine             7.1         36           2
 H histidine           2.4         12           2
 I isoleucine          4.6         23           1
 K lysine              6.1         31           3
 L leucine             9.9         50           3
 M methionine          1.4          7           1
 N asparagine          2.8         14           1
 P proline             8.5         43           3
 Q glutamine           3.6         18           1
 R arginine            5.9         30           2
 S serine              6.9         35           2
 T threonine           2.8         14           2
 V valine              7.7         39           2
 W tryptophan          0.8          4           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase 1 alpha ... 
CAMKK1                1.000   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK1                0.935   calcium/calmodulin-dependent protein kinase 1 alpha...
CAMKK2                0.574   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.574   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.567   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.567   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.486   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.479   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.479   calcium/calmodulin-dependent protein kinase kinase 2...
BRSK1                 0.121   BR serine/threonine kinase 1 
SIK2                  0.120   SNF1-like kinase 2 
CAMK2G                0.120   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2D                0.118   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.118   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.118   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.118   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.118   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.118   calcium/calmodulin-dependent protein kinase II delta...
MARK1                 0.118   MAP/microtubule affinity-regulating kinase 1 
STK11                 0.118   serine/threonine protein kinase 11 
CAMK2A                0.118   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.118   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
PRKAA2                0.117   AMP-activated protein kinase alpha 2 catalytic subun...
CAMK2B                0.117   calcium/calmodulin-dependent protein kinase II beta ...
PRKAA1                0.115   protein kinase, AMP-activated, alpha 1 catalytic sub...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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