Search of human proteins with 25901062

Search of human proteins with 25901062

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25901062 hypothetical protein LOC56261 [Homo sapiens]
         (672 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25901062 hypothetical protein LOC56261 [Homo sapiens]             1367   0.0  
gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens]    44   4e-04
gi|21361649 osteoblast differentiation promoting factor protein ...    44   4e-04
gi|33457301 glycerophosphodiester phosphodiesterase domain conta...    42   0.002
gi|212276104 leucine rich repeat (in FLII) interacting protein 1...    37   0.059
gi|212276096 leucine rich repeat (in FLII) interacting protein 1...    37   0.059
gi|212276070 leucine rich repeat (in FLII) interacting protein 1...    37   0.059
gi|146198640 glycerophosphodiester phosphodiesterase domain cont...    34   0.50 
gi|32698962 glycerophosphodiester phosphodiesterase domain conta...    33   0.66 
gi|189571657 glycerophosphodiester phosphodiesterase domain cont...    33   0.66 
gi|31542743 EF-hand domain (C-terminal) containing 2 [Homo sapiens]    32   1.9  
gi|56676397 ankyrin repeat domain 11 [Homo sapiens]                    31   3.3  
gi|40217825 slit and trk like 6 [Homo sapiens]                         30   7.2  
gi|189571679 NudC domain containing 1 isoform 2 [Homo sapiens]         30   9.5  
gi|189571677 NudC domain containing 1 isoform 1 [Homo sapiens]         30   9.5  

>gi|25901062 hypothetical protein LOC56261 [Homo sapiens]
          Length = 672

 Score = 1367 bits (3537), Expect = 0.0
 Identities = 672/672 (100%), Positives = 672/672 (100%)

Query: 1   MTPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSR 60
           MTPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSR
Sbjct: 1   MTPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSR 60

Query: 61  GVSVQYRYFKGYFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVE 120
           GVSVQYRYFKGYFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVE
Sbjct: 61  GVSVQYRYFKGYFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVE 120

Query: 121 TLDSGWLTCQTEIRLRLHYSEKPPVSITKKKLKKSRFRVKLTLEGLEEDDDDRVSPTVLH 180
           TLDSGWLTCQTEIRLRLHYSEKPPVSITKKKLKKSRFRVKLTLEGLEEDDDDRVSPTVLH
Sbjct: 121 TLDSGWLTCQTEIRLRLHYSEKPPVSITKKKLKKSRFRVKLTLEGLEEDDDDRVSPTVLH 180

Query: 181 KMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSE 240
           KMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSE
Sbjct: 181 KMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSE 240

Query: 241 HVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPG 300
           HVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPG
Sbjct: 241 HVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPG 300

Query: 301 YSCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFD 360
           YSCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFD
Sbjct: 301 YSCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFD 360

Query: 361 VHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKD 420
           VHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKD
Sbjct: 361 VHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKD 420

Query: 421 RKESVVQEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMN 480
           RKESVVQEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMN
Sbjct: 421 RKESVVQEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMN 480

Query: 481 LFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSEIYPELMDLRS 540
           LFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSEIYPELMDLRS
Sbjct: 481 LFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSEIYPELMDLRS 540

Query: 541 RTTPIAMSFAQFENLLGINVHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRRKLKE 600
           RTTPIAMSFAQFENLLGINVHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRRKLKE
Sbjct: 541 RTTPIAMSFAQFENLLGINVHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRRKLKE 600

Query: 601 LGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSLCGESDIH 660
           LGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSLCGESDIH
Sbjct: 601 LGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSLCGESDIH 660

Query: 661 VDANGIDNVENA 672
           VDANGIDNVENA
Sbjct: 661 VDANGIDNVENA 672


>gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens]
          Length = 331

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 9/64 (14%)

Query: 314 KPRIPLD-VGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVY 372
           KPR  +  + HRG  +           ENT+A++R AA +GA  VE D+  + D +PV+ 
Sbjct: 60  KPRDRISAIAHRGGSHDAP--------ENTLAAIRQAAKNGATGVELDIEFTSDGIPVLM 111

Query: 373 HDLT 376
           HD T
Sbjct: 112 HDNT 115


>gi|21361649 osteoblast differentiation promoting factor protein
           [Homo sapiens]
          Length = 539

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 35/254 (13%)

Query: 315 PRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHD 374
           P  P  VGHRGA        LA   ENT+ SLR  A  GA   E DV +S D VP + HD
Sbjct: 221 PPKPGLVGHRGA------PMLAP--ENTLMSLRKTAECGATVFETDVMVSSDGVPFLMHD 272

Query: 375 ------LTCCLTMKKKFDADPVELFEIPVKELTFDQ--LQLLKLTHVTALKSKDRKESVV 426
                          +  A   +     +K L      L+         L   D+KE   
Sbjct: 273 EHLSRTTNVASVFPTRITAHSSDFSWTELKRLNAGSWFLERRPFWGAKPLAGPDQKE--- 329

Query: 427 QEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNLFLDII 486
                 +E+Q  P+L+ +LE   E    N+ I +     D        TY+D   F+   
Sbjct: 330 ------AESQTVPALEELLE---EAAALNLSIMF-----DLRRPPQNHTYYD--TFVIQT 373

Query: 487 LKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSEIYPELMDLRSRTTPIA 546
           L+TVL     + +VF   D D   + R+      I     G     P+ ++L  +  P+ 
Sbjct: 374 LETVLNARVPQAMVFWLPDEDRANVQRRAPGMRQIYGRQGGNRTERPQFLNLPYQDLPLL 433

Query: 547 MSFAQFENLLGINV 560
              A  ++ + +N+
Sbjct: 434 DIKALHKDNVSVNL 447


>gi|33457301 glycerophosphodiester phosphodiesterase domain
           containing 4 [Homo sapiens]
          Length = 520

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 11/82 (13%)

Query: 293 IIIKPLPGYSCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASH 352
           + + PL  YS  ++   +   KP I    GHRGA             ENT+ S   A  H
Sbjct: 176 LYLMPLGIYSPCIQEKENLGPKPTI---FGHRGAPMLGP--------ENTMMSFEKAVEH 224

Query: 353 GAAFVEFDVHLSKDFVPVVYHD 374
           GA  +E D+HLS D VP + HD
Sbjct: 225 GAHGLETDIHLSYDHVPFLMHD 246


>gi|212276104 leucine rich repeat (in FLII) interacting protein 1
           isoform 5 [Homo sapiens]
          Length = 752

 Score = 37.0 bits (84), Expect = 0.059
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 382 KKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKDRKESVVQEENSFSENQPFPSL 441
           KKK    PVE  +   KELT+    L ++     +KS DRK S V+ +N  +EN   P  
Sbjct: 521 KKKKSPVPVETLKDVKKELTYQNTDLSEIKEEEQVKSTDRK-SAVEAQNEVTEN---PKQ 576

Query: 442 KMVLES 447
           K+  ES
Sbjct: 577 KIAAES 582


>gi|212276096 leucine rich repeat (in FLII) interacting protein 1
           isoform 3 [Homo sapiens]
          Length = 808

 Score = 37.0 bits (84), Expect = 0.059
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 382 KKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKDRKESVVQEENSFSENQPFPSL 441
           KKK    PVE  +   KELT+    L ++     +KS DRK S V+ +N  +EN   P  
Sbjct: 577 KKKKSPVPVETLKDVKKELTYQNTDLSEIKEEEQVKSTDRK-SAVEAQNEVTEN---PKQ 632

Query: 442 KMVLES 447
           K+  ES
Sbjct: 633 KIAAES 638


>gi|212276070 leucine rich repeat (in FLII) interacting protein 1
           isoform 4 [Homo sapiens]
          Length = 784

 Score = 37.0 bits (84), Expect = 0.059
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 382 KKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKDRKESVVQEENSFSENQPFPSL 441
           KKK    PVE  +   KELT+    L ++     +KS DRK S V+ +N  +EN   P  
Sbjct: 553 KKKKSPVPVETLKDVKKELTYQNTDLSEIKEEEQVKSTDRK-SAVEAQNEVTEN---PKQ 608

Query: 442 KMVLES 447
           K+  ES
Sbjct: 609 KIAAES 614


>gi|146198640 glycerophosphodiester phosphodiesterase domain
           containing 3 [Homo sapiens]
          Length = 318

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 16/58 (27%), Positives = 30/58 (51%)

Query: 340 ENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPV 397
           ENT+ ++ N+ +  +  +E D  L++D V VV HD   C       D   ++  ++P+
Sbjct: 53  ENTMEAMENSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGSLDFEDLPL 110


>gi|32698962 glycerophosphodiester phosphodiesterase domain
           containing 1 [Homo sapiens]
          Length = 314

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 321 VGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHD 374
           + HRG              ENT+A+ ++A   G   +E D H++KD   VV HD
Sbjct: 43  ISHRGGAGENL--------ENTMAAFQHAVKIGTDTLELDCHITKDEQVVVSHD 88


>gi|189571657 glycerophosphodiester phosphodiesterase domain
           containing 5 [Homo sapiens]
          Length = 605

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 10/91 (10%)

Query: 318 PLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTC 377
           P  +GHRGA        LA   E+T+ S R A       ++ D+ +S D VP + HD T 
Sbjct: 228 PALIGHRGA------PMLAP--EHTLMSFRKALEQKLYGLQADITISLDGVPFLMHDTT- 278

Query: 378 CLTMKKKFDADPVELFEIPVKELTFDQLQLL 408
            L      + +  EL   P   L +  LQ L
Sbjct: 279 -LRRTTNVEEEFPELARRPASMLNWTTLQRL 308


>gi|31542743 EF-hand domain (C-terminal) containing 2 [Homo sapiens]
          Length = 749

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 433 SENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNLFLDIILKTVLE 492
           ++  PF +LK+ L+ L ++ G + E+K + +      D   +   D N F DI++   + 
Sbjct: 538 TDKYPFSNLKLALQKLKQEEGKSRELKQVFKAA----DSKHTNMVDYNTFRDILMSLTVG 593

Query: 493 NSGKRRIV 500
           N  ++  V
Sbjct: 594 NLAEQEFV 601


>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
          Length = 2663

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 417 KSKDRKESVVQEENSFSENQPFPSLKMVLESLPEDVGFNI----EIKWICQQRDG----- 467
           K K +KE V +E+++F E   + +    LE+  ED  F++      +W     D      
Sbjct: 799 KEKLKKEKVYREDSAFDE---YCNKNQFLEN--EDTKFSLSDDQRDRWFSDLSDSSFDFK 853

Query: 468 ---MWDGNLSTYFDM--NLFLDIILKTVLENSGKRR 498
               WD  ++ Y DM  +    +IL+TV E+S +RR
Sbjct: 854 GEDSWDSPVTDYRDMKSDSVAKLILETVKEDSKERR 889


>gi|40217825 slit and trk like 6 [Homo sapiens]
          Length = 841

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 325 GAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVV-------YHDLTC 377
           GA N     +   +  N++  L+    HG   +EF +    +F+ V+        + L  
Sbjct: 106 GAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEF-LQADNNFITVIEPSAFSKLNRLKV 164

Query: 378 CLTMKKKFDADPVELFE-IPVKELTFDQLQLLKLTHVTALKSKDRKESVVQEENSFSENQ 436
            +      ++ P  +F  +P+  L     QL  L +V  L+   R   +  E+N ++ N 
Sbjct: 165 LILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNKWACNC 224

Query: 437 PFPSLKMVLESLP 449
               LK  LE++P
Sbjct: 225 DLLQLKTWLENMP 237


>gi|189571679 NudC domain containing 1 isoform 2 [Homo sapiens]
          Length = 554

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 18/33 (54%), Positives = 19/33 (57%)

Query: 163 LEGLEEDDDDRVSPTVLHKMSNSLEISLISDNE 195
           LEG      D  S T + K SNSLEISLI  NE
Sbjct: 292 LEGKLYSSIDHESSTWIIKESNSLEISLIKKNE 324


>gi|189571677 NudC domain containing 1 isoform 1 [Homo sapiens]
          Length = 583

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 18/33 (54%), Positives = 19/33 (57%)

Query: 163 LEGLEEDDDDRVSPTVLHKMSNSLEISLISDNE 195
           LEG      D  S T + K SNSLEISLI  NE
Sbjct: 321 LEGKLYSSIDHESSTWIIKESNSLEISLIKKNE 353


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,371,940
Number of Sequences: 37866
Number of extensions: 1198047
Number of successful extensions: 2745
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2727
Number of HSP's gapped (non-prelim): 22
length of query: 672
length of database: 18,247,518
effective HSP length: 109
effective length of query: 563
effective length of database: 14,120,124
effective search space: 7949629812
effective search space used: 7949629812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.