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Search of human proteins with 120433593
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|120433593 diazepam binding inhibitor isoform 2 [Homo
sapiens]
(88 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens] 184 1e-47
gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens] 176 5e-45
gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens] 176 5e-45
gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo sa... 108 9e-25
gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens] 99 5e-22
gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens] 99 5e-22
gi|89038414 PREDICTED: similar to diazepam binding inhibitor [Ho... 99 5e-22
gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo sa... 72 7e-14
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 71 2e-13
gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform... 71 2e-13
gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform... 71 2e-13
gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform... 71 2e-13
gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform ... 71 2e-13
gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform... 71 2e-13
gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform... 65 9e-12
gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform... 65 9e-12
gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo sa... 32 0.11
gi|40807477 retinoic acid induced 1 [Homo sapiens] 30 0.41
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 28 1.2
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 28 2.0
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens] 28 2.0
>gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens]
Length = 88
Score = 184 bits (467), Expect = 1e-47
Identities = 88/88 (100%), Positives = 88/88 (100%)
Query: 1 MPAFAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAW 60
MPAFAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAW
Sbjct: 1 MPAFAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAW 60
Query: 61 NELKGTSKEDAMKAYINKVEELKKKYGI 88
NELKGTSKEDAMKAYINKVEELKKKYGI
Sbjct: 61 NELKGTSKEDAMKAYINKVEELKKKYGI 88
>gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens]
Length = 87
Score = 176 bits (445), Expect = 5e-45
Identities = 84/84 (100%), Positives = 84/84 (100%)
Query: 5 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 64
AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK
Sbjct: 4 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 63
Query: 65 GTSKEDAMKAYINKVEELKKKYGI 88
GTSKEDAMKAYINKVEELKKKYGI
Sbjct: 64 GTSKEDAMKAYINKVEELKKKYGI 87
>gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens]
Length = 104
Score = 176 bits (445), Expect = 5e-45
Identities = 84/84 (100%), Positives = 84/84 (100%)
Query: 5 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 64
AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK
Sbjct: 21 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 80
Query: 65 GTSKEDAMKAYINKVEELKKKYGI 88
GTSKEDAMKAYINKVEELKKKYGI
Sbjct: 81 GTSKEDAMKAYINKVEELKKKYGI 104
>gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo
sapiens]
Length = 88
Score = 108 bits (270), Expect = 9e-25
Identities = 52/84 (61%), Positives = 63/84 (75%)
Query: 5 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 64
A+F++AAE+VR LK +P D E+ +YG YKQA VGDIN PGMLD GKAKW+AWN K
Sbjct: 5 ADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKK 64
Query: 65 GTSKEDAMKAYINKVEELKKKYGI 88
G S EDA AYI+K +EL +KYGI
Sbjct: 65 GLSTEDATSAYISKAKELIEKYGI 88
>gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens]
Length = 88
Score = 99.4 bits (246), Expect = 5e-22
Identities = 47/84 (55%), Positives = 62/84 (73%)
Query: 5 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 64
A+F+ E+VR LKT+P DEE+ +YG YKQA +G+IN E ML+ GKAKW+A N K
Sbjct: 5 ADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQK 64
Query: 65 GTSKEDAMKAYINKVEELKKKYGI 88
G S+ED M+A+I+K EEL +KYGI
Sbjct: 65 GLSEEDMMRAFISKAEELIEKYGI 88
>gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens]
Length = 88
Score = 99.4 bits (246), Expect = 5e-22
Identities = 47/84 (55%), Positives = 62/84 (73%)
Query: 5 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 64
A+F+ E+VR LKT+P DEE+ +YG YKQA +G+IN E ML+ GKAKW+A N K
Sbjct: 5 ADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQK 64
Query: 65 GTSKEDAMKAYINKVEELKKKYGI 88
G S+ED M+A+I+K EEL +KYGI
Sbjct: 65 GLSEEDMMRAFISKAEELIEKYGI 88
>gi|89038414 PREDICTED: similar to diazepam binding inhibitor
[Homo sapiens]
Length = 88
Score = 99.4 bits (246), Expect = 5e-22
Identities = 47/84 (55%), Positives = 62/84 (73%)
Query: 5 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 64
A+F+ E+VR LKT+P DEE+ +YG YKQA +G+IN E ML+ GKAKW+A N K
Sbjct: 5 ADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQK 64
Query: 65 GTSKEDAMKAYINKVEELKKKYGI 88
G S+ED M+A+I+K EEL +KYGI
Sbjct: 65 GLSEEDMMRAFISKAEELIEKYGI 88
>gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo
sapiens]
Length = 282
Score = 72.4 bits (176), Expect = 7e-14
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 7 FEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGT 66
FEKAA ++ L S E++L++Y YKQ VG+ NT +P DF GK KW+AW L +
Sbjct: 46 FEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDS 105
Query: 67 SKEDAMKAYINKVEEL 82
S AM+ YI V++L
Sbjct: 106 SPSQAMQEYIAVVKKL 121
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 71.2 bits (173), Expect = 2e-13
Identities = 34/77 (44%), Positives = 45/77 (58%)
Query: 6 EFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKG 65
+FE + +V+ LK P +E L +Y YKQAT G N +PG+ D KAKWDAWN L
Sbjct: 12 DFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGS 71
Query: 66 TSKEDAMKAYINKVEEL 82
KE A + Y++ V L
Sbjct: 72 LPKEAARQNYVDLVSSL 88
>gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform
3 [Homo sapiens]
Length = 268
Score = 71.2 bits (173), Expect = 2e-13
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 6 EFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 61
+F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDAWN
Sbjct: 15 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWN 74
Query: 62 ELKGTSKEDAMKAYINKVEELKKK 85
L S+E+AM AYI +++ + +K
Sbjct: 75 SLGKMSREEAMSAYITEMKLVAQK 98
>gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform
1 [Homo sapiens]
Length = 341
Score = 71.2 bits (173), Expect = 2e-13
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 6 EFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 61
+F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDAWN
Sbjct: 15 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWN 74
Query: 62 ELKGTSKEDAMKAYINKVEELKKK 85
L S+E+AM AYI +++ + +K
Sbjct: 75 SLGKMSREEAMSAYITEMKLVAQK 98
>gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform
2 [Homo sapiens]
Length = 305
Score = 71.2 bits (173), Expect = 2e-13
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 6 EFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 61
+F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDAWN
Sbjct: 15 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWN 74
Query: 62 ELKGTSKEDAMKAYINKVEELKKK 85
L S+E+AM AYI +++ + +K
Sbjct: 75 SLGKMSREEAMSAYITEMKLVAQK 98
>gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 71.2 bits (173), Expect = 2e-13
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 6 EFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 61
+F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDAWN
Sbjct: 15 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWN 74
Query: 62 ELKGTSKEDAMKAYINKVEELKKK 85
L S+E+AM AYI +++ + +K
Sbjct: 75 SLGKMSREEAMSAYITEMKLVAQK 98
>gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform
1 [Homo sapiens]
Length = 341
Score = 71.2 bits (173), Expect = 2e-13
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 6 EFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 61
+F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDAWN
Sbjct: 15 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWN 74
Query: 62 ELKGTSKEDAMKAYINKVEELKKK 85
L S+E+AM AYI +++ + +K
Sbjct: 75 SLGKMSREEAMSAYITEMKLVAQK 98
>gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform
2 [Homo sapiens]
Length = 490
Score = 65.5 bits (158), Expect = 9e-12
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 7 FEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 62
FE A + ++ L +P++E ML Y YKQAT G RPG D G+ KWDAW+
Sbjct: 12 FEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSS 71
Query: 63 LKGTSKEDAMKAYINKVEELKK 84
L +KE+AM AY VEE+KK
Sbjct: 72 LGDMTKEEAMIAY---VEEMKK 90
>gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform 1
[Homo sapiens]
Length = 525
Score = 65.5 bits (158), Expect = 9e-12
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 7 FEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 62
FE A + ++ L +P++E ML Y YKQAT G RPG D G+ KWDAW+
Sbjct: 47 FEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSS 106
Query: 63 LKGTSKEDAMKAYINKVEELKK 84
L +KE+AM AY VEE+KK
Sbjct: 107 LGDMTKEEAMIAY---VEEMKK 125
>gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo
sapiens]
Length = 528
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 21 PSDEEMLFIYGHYKQATVGDINTE---RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYI 76
P+ EE L + +KQ +G N + G D G + W L SKEDAM ++
Sbjct: 104 PTYEEKLKLVALHKQVLMGPYNPDTCPEVGFFDVLGNDRRREWAALGNMSKEDAMVEFV 162
>gi|40807477 retinoic acid induced 1 [Homo sapiens]
Length = 1906
Score = 30.0 bits (66), Expect = 0.41
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 21 PSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 62
P E++ + G +KQ VG + E G+L AK D W E
Sbjct: 798 PPGEKVASLPGDFKQEEVGGVKEEAGGLLQCPEVAKADRWLE 839
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 8 EKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPG 47
EK EE+ H+KT+ E+ML Y + Q + T +PG
Sbjct: 3006 EKVKEEITHIKTQA--EDMLVSYENIIQTAMMSSKTGKPG 3043
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 22 SDEEMLFIYGHYKQATVGDINTERP-----GMLDFTGKAKWDAWNELKGTSKED 70
SD E +++ H+ + D + ERP G FT A +D++ E + K D
Sbjct: 698 SDSEWNYLHHHHDASCRQDFSPERPKADSLGCPSFTSMATYDSFLEKSPSDKAD 751
>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
Length = 1474
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 22 SDEEMLFIYGHYKQATVGDINTERP-----GMLDFTGKAKWDAWNELKGTSKED 70
SD E +++ H+ + D + ERP G FT A +D++ E + K D
Sbjct: 542 SDSEWNYLHHHHDASCRQDFSPERPKADSLGCPSFTSMATYDSFLEKSPSDKAD 595
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,413,459
Number of Sequences: 37866
Number of extensions: 128763
Number of successful extensions: 255
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 21
length of query: 88
length of database: 18,247,518
effective HSP length: 60
effective length of query: 28
effective length of database: 15,975,558
effective search space: 447315624
effective search space used: 447315624
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.