Guide to the Human Genome
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Name: PYCR1 Sequence: fasta or formatted (316aa) NCBI GI: 24797095
Description:

pyrroline-5-carboxylate reductase 1 isoform 2

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Other entries for this name:
alt prot [319aa] pyrroline-5-carboxylate reductase 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         40           2
 C cysteine            1.3          4           1
 D aspartate           4.7         15           1
 E glutamate           5.4         17           2
 F phenylalanine       2.8          9           1
 G glycine             8.5         27           2
 H histidine           3.8         12           1
 I isoleucine          5.4         17           2
 K lysine              4.4         14           2
 L leucine            12.3         39           3
 M methionine          2.8          9           1
 N asparagine          1.3          4           1
 P proline             5.1         16           1
 Q glutamine           3.8         12           1
 R arginine            4.4         14           2
 S serine              7.3         23           2
 T threonine           5.1         16           1
 V valine              7.9         25           3
 W tryptophan          0.0          0           0
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pyrroline-5-carboxylate reductase 1 isoform 2 
PYCR1                 0.915   pyrroline-5-carboxylate reductase 1 isoform 1 
PYCR2                 0.808   pyrroline-5-carboxylate reductase family, member 2 [...
PYCRL                 0.344   pyrroline-5-carboxylate reductase-like 
C14orf148             0.046   hypothetical protein LOC122945 isoform 1 
C14orf148             0.046   hypothetical protein LOC122945 isoform 2 
NIPBL                 0.010   delangin isoform B 
NIPBL                 0.010   delangin isoform A 
ASCC3                 0.009   activating signal cointegrator 1 complex subunit 3 i...
SORD                  0.009   sorbitol dehydrogenase 
TOMM70A               0.009   translocase of outer mitochondrial membrane 70 homol...
SNX30                 0.007   sorting nexin family member 30 
MYO16                 0.007   myosin heavy chain Myr 8 
UHRF1BP1              0.005   ICBP90 binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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