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Search of human proteins with 24234690
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24234690 meiotic recombination 11 homolog A isoform 2 [Homo
sapiens]
(680 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24234690 meiotic recombination 11 homolog A isoform 2 [Homo s... 1357 0.0
gi|5031923 meiotic recombination 11 homolog A isoform 1 [Homo sa... 1342 0.0
gi|52426743 cisplatin resistance-associated overexpressed protei... 51 4e-06
gi|19923485 cisplatin resistance-associated overexpressed protei... 51 4e-06
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 49 1e-05
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 49 1e-05
gi|224589132 hypothetical protein LOC100132406 [Homo sapiens] 44 5e-04
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 43 0.001
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 43 0.001
gi|71061468 centromere protein E [Homo sapiens] 41 0.003
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 40 0.005
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 40 0.005
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 40 0.005
gi|156071420 hypothetical protein LOC728912 [Homo sapiens] 39 0.012
gi|119709825 neuroblastoma breakpoint family, member 11-like [Ho... 39 0.012
gi|224458301 family with sequence similarity 186, member A [Homo... 39 0.016
gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo ... 39 0.016
gi|239741297 PREDICTED: neuroblastoma breakpoint family, member ... 39 0.016
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 39 0.016
gi|92110019 hypothetical protein LOC55672 [Homo sapiens] 39 0.016
gi|4505257 moesin [Homo sapiens] 39 0.021
gi|4506467 radixin [Homo sapiens] 39 0.021
gi|92859701 myosin VI [Homo sapiens] 39 0.021
gi|83415174 hypothetical protein LOC400818 [Homo sapiens] 38 0.027
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 37 0.046
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 37 0.046
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 37 0.046
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 37 0.060
gi|221219020 NYD-SP11 protein [Homo sapiens] 37 0.078
gi|27436948 lamin A/C isoform 3 [Homo sapiens] 37 0.078
>gi|24234690 meiotic recombination 11 homolog A isoform 2 [Homo
sapiens]
Length = 680
Score = 1357 bits (3512), Expect = 0.0
Identities = 680/680 (100%), Positives = 680/680 (100%)
Query: 1 MSTADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGD 60
MSTADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGD
Sbjct: 1 MSTADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGD 60
Query: 61 LFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISI 120
LFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISI
Sbjct: 61 LFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISI 120
Query: 121 PVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYG 180
PVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYG
Sbjct: 121 PVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYG 180
Query: 181 LGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDL 240
LGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDL
Sbjct: 181 LGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDL 240
Query: 241 VIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP 300
VIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP
Sbjct: 241 VIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP 300
Query: 301 LHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEK 360
LHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEK
Sbjct: 301 LHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEK 360
Query: 361 PLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITK 420
PLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITK
Sbjct: 361 PLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITK 420
Query: 421 PSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEK 480
PSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEK
Sbjct: 421 PSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEK 480
Query: 481 TQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAF 540
TQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAF
Sbjct: 481 TQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAF 540
Query: 541 SADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTR 600
SADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTR
Sbjct: 541 SADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTR 600
Query: 601 QQPSRNVTTKNYSEVIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFES 660
QQPSRNVTTKNYSEVIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFES
Sbjct: 601 QQPSRNVTTKNYSEVIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFES 660
Query: 661 SEDDDDDPFMNTSSLRRNRR 680
SEDDDDDPFMNTSSLRRNRR
Sbjct: 661 SEDDDDDPFMNTSSLRRNRR 680
>gi|5031923 meiotic recombination 11 homolog A isoform 1 [Homo
sapiens]
Length = 708
Score = 1342 bits (3473), Expect = 0.0
Identities = 680/708 (96%), Positives = 680/708 (96%), Gaps = 28/708 (3%)
Query: 1 MSTADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGD 60
MSTADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGD
Sbjct: 1 MSTADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGD 60
Query: 61 LFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISI 120
LFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISI
Sbjct: 61 LFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISI 120
Query: 121 PVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYG 180
PVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYG
Sbjct: 121 PVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYG 180
Query: 181 LGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDL 240
LGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDL
Sbjct: 181 LGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDL 240
Query: 241 VIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP 300
VIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP
Sbjct: 241 VIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP 300
Query: 301 LHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEK 360
LHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEK
Sbjct: 301 LHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEK 360
Query: 361 PLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITK 420
PLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITK
Sbjct: 361 PLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITK 420
Query: 421 PSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEK 480
PSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEK
Sbjct: 421 PSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEK 480
Query: 481 TQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAF 540
TQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAF
Sbjct: 481 TQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAF 540
Query: 541 SADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGR------ 594
SADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGR
Sbjct: 541 SADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRADTGLE 600
Query: 595 ----------------------AFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTS 632
AFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTS
Sbjct: 601 TSTRSRNSKTAVSASRNMSIIDAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTS 660
Query: 633 KTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTSSLRRNRR 680
KTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTSSLRRNRR
Sbjct: 661 KTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTSSLRRNRR 708
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 50.8 bits (120), Expect = 4e-06
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 440 AEKNVQLSLLTERGMGEA-----VQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALE 494
A+ V L+ ++ MG A V+E +K K E +L+K ++ +ER +
Sbjct: 204 AQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKERER 263
Query: 495 DKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQM 554
++ + E +R RE EE+ E A R R RS+S S+ ++D +
Sbjct: 264 EREERERKRRRE-------EEEREKERARDRERRKRSRSRSRHSSRTSD--------RRC 308
Query: 555 ANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSE 614
+ D S + + R R R RR R + + R R R + ++ + ++ ++ S
Sbjct: 309 SRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSR 368
Query: 615 VIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTS 673
E D E++ +D + SS S S+ + S+ + ES E D + TS
Sbjct: 369 DREQDRKSKEKE----KRGSDDKKSSVKSG---SREKQSEDTNTESKESDTKNEVNGTS 420
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 50.8 bits (120), Expect = 4e-06
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 27/239 (11%)
Query: 440 AEKNVQLSLLTERGMGEA-----VQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALE 494
A+ V L+ ++ MG A V+E +K K E +L+K ++ +ER +
Sbjct: 204 AQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKERER 263
Query: 495 DKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQM 554
++ + E +R RE EE+ E A R R RS+S S+ ++D +
Sbjct: 264 EREERERKRRRE-------EEEREKERARDRERRKRSRSRSRHSSRTSD--------RRC 308
Query: 555 ANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSE 614
+ D S + + R R R RR R + + R R R + ++ + ++ ++ S
Sbjct: 309 SRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSR 368
Query: 615 VIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTS 673
E D E++ +D + SS S S+ + S+ + ES E D + TS
Sbjct: 369 DREQDRKSKEKE----KRGSDDKKSSVKSG---SREKQSEDTNTESKESDTKNEVNGTS 420
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 49.3 bits (116), Expect = 1e-05
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 453 GMGEAVQEFVDKE----EKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETR 508
G ++E DKE E+D E+L KY+L++ D ED D +
Sbjct: 140 GPASILKEVEDKESEGEEEDEDEDLSKYKLDE----------DEDEDDADLSKYNLDASE 189
Query: 509 QKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNK 568
++++N++ R +R+++ S S S+ + S S + ++ S S S ++++
Sbjct: 190 EEDSNKKKSNRR---SRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSR 246
Query: 569 GRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRN 606
R R RG + S S R R++ S+ P RN
Sbjct: 247 ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERN 284
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 49.3 bits (116), Expect = 1e-05
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 453 GMGEAVQEFVDKE----EKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETR 508
G ++E DKE E+D E+L KY+L++ D ED D +
Sbjct: 140 GPASILKEVEDKESEGEEEDEDEDLSKYKLDE----------DEDEDDADLSKYNLDASE 189
Query: 509 QKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNK 568
++++N++ R +R+++ S S S+ + S S + ++ S S S ++++
Sbjct: 190 EEDSNKKKSNRR---SRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSR 246
Query: 569 GRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRN 606
R R RG + S S R R++ S+ P RN
Sbjct: 247 ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERN 284
>gi|224589132 hypothetical protein LOC100132406 [Homo sapiens]
Length = 3628
Score = 43.9 bits (102), Expect = 5e-04
Identities = 32/151 (21%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEK---- 467
++ G L ++ +E L + + ++ Q AEK Q L E+ + F+ ++K
Sbjct: 274 VSAGPLSSEKAEMNILEINEKLRP--QLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKY 331
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ ++L+K+ L ++F +E+ + L+ EE+R+++ +++ + +++RE
Sbjct: 332 EECKDLIKFMLRNERQFKEEKLAEQLKQA--EELRQYKVLVHAQERELTQLKEKLREGRD 389
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + + D DL EQ+A
Sbjct: 390 ASRSLNEHLQALLTPYEPDKSQGQDLQEQLA 420
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 42.7 bits (99), Expect = 0.001
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 26/177 (14%)
Query: 448 LLTERGMGEAVQEFVD--KEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR 505
LLT + ++++VD ++ K EL Q K + R E+K+ E+ ++ +
Sbjct: 592 LLTLVSTRDFIEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMK 651
Query: 506 ETRQKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAA 565
E ++K ++DE R + + E+ ++ + D +L + M + +D +
Sbjct: 652 EKQEKL---KEDEQRNSTADISIGEEEREDFDTSIESKDTEQKELDQDMVTEDEDDPGS- 707
Query: 566 TNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSEVIEVDESD 622
RGRRG RGQN FK +Q N T+ E + DE +
Sbjct: 708 ------HKRGRRGKRGQN-----------GFKEFTRQEQINCVTR---EPLTADEEE 744
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 42.7 bits (99), Expect = 0.001
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 26/177 (14%)
Query: 448 LLTERGMGEAVQEFVD--KEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR 505
LLT + ++++VD ++ K EL Q K + R E+K+ E+ ++ +
Sbjct: 624 LLTLVSTRDFIEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMK 683
Query: 506 ETRQKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAA 565
E ++K ++DE R + + E+ ++ + D +L + M + +D +
Sbjct: 684 EKQEKL---KEDEQRNSTADISIGEEEREDFDTSIESKDTEQKELDQDMVTEDEDDPGS- 739
Query: 566 TNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSEVIEVDESD 622
RGRRG RGQN FK +Q N T+ E + DE +
Sbjct: 740 ------HKRGRRGKRGQN-----------GFKEFTRQEQINCVTR---EPLTADEEE 776
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 41.2 bits (95), Expect = 0.003
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 297 HKIPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSH 356
HK+ ++ +R+ D + + D+F S L+ + E+ N + L N
Sbjct: 451 HKLSINLLREI---DESVCSESDVF------------SNTLDTLSEIEWNPATKLL-NQE 494
Query: 357 QPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGK 416
E L LR DY + LR ++ ++ K+ + F E+K K +E+ +
Sbjct: 495 NIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEM---Q 551
Query: 417 LITKPSEGTTLRVEDLVKQ---YFQTAEKNV--QLSLLTER-GMGEAVQEFVDKEEKDAI 470
LI + S +++LVK Y Q E + ++ LL E+ + +QE++D ++ + I
Sbjct: 552 LIHEIS-----NLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENI 606
Query: 471 EELVKYQLEKTQ--RFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
+ + Y LE + + +K+ DA +D + R R +N E ++++E T +
Sbjct: 607 KMDLSYSLESIEDPKQMKQTLFDAETVALDAK-RESAFLRSENL-ELKEKMKELATTYKQ 664
Query: 529 LRSQSEESASAFSADDLMSIDLAEQM 554
+ + + S A M +DL +++
Sbjct: 665 MENDIQLYQSQLEAKKKMQVDLEKEL 690
Score = 35.4 bits (80), Expect = 0.17
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 464 KEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTN-EEDDEVREA 522
KE ++ I+EL + EKT + + + ++ K+ EE+ E ++ N +E E +E
Sbjct: 1245 KEHQETIDELRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQET 1304
Query: 523 MTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNK 568
M L QS S A M + +S + I + T +
Sbjct: 1305 MNELELLTEQSTTKDSTTLARIEMERLRLNEKFQESQEEIKSLTKE 1350
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 40.4 bits (93), Expect = 0.005
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 14/288 (4%)
Query: 339 KIEEMLE--NAERERLG--NSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD 394
+++E +E + + ER+G N P +P+ + D S +P ++ + +DR P
Sbjct: 357 EVDENIELISGQNERMGPLNISTPVEPVAASKSDVSPIIQPVPSIKNVPQ-IDRTKKPAV 415
Query: 395 IIHFFRHREQKEKTGEEINF---GKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTE 451
+ HR + E T E GK+I S + L+ + A + + +LL E
Sbjct: 416 KLPE-EHRIKSESTNHEQQSPQSGKVIPDRSTKPVVFSPTLMLTDEEKARIHAETALLME 474
Query: 452 RGMGEA-VQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETRQK 510
+ E ++E +E+K+ + + + Q K ++ +E I + K EE+ + + K
Sbjct: 475 KNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQAK 534
Query: 511 NTNEEDDEVR--EAMTRARALRSQSEESASAFSADDL-MSIDLAEQMANDSDDSISAATN 567
++E R E R +S+ E S + S +D E + D +
Sbjct: 535 KEDKETSAKRGKEITGVKRQSKSEHETSDAKKSVEDRGKRCPTPEIQKKSTGDVPHTSVT 594
Query: 568 KGRGRGRG-RRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSE 614
G G+ + G+ ++ R G+ R + R + R T+ SE
Sbjct: 595 GDSGSGKPFKIKGQPESGILRTGTFREDTDDTERNKAQREPLTRARSE 642
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 40.4 bits (93), Expect = 0.005
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 14/288 (4%)
Query: 339 KIEEMLE--NAERERLG--NSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD 394
+++E +E + + ER+G N P +P+ + D S +P ++ + +DR P
Sbjct: 357 EVDENIELISGQNERMGPLNISTPVEPVAASKSDVSPIIQPVPSIKNVPQ-IDRTKKPAV 415
Query: 395 IIHFFRHREQKEKTGEEINF---GKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTE 451
+ HR + E T E GK+I S + L+ + A + + +LL E
Sbjct: 416 KLPE-EHRIKSESTNHEQQSPQSGKVIPDRSTKPVVFSPTLMLTDEEKARIHAETALLME 474
Query: 452 RGMGEA-VQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETRQK 510
+ E ++E +E+K+ + + + Q K ++ +E I + K EE+ + + K
Sbjct: 475 KNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQAK 534
Query: 511 NTNEEDDEVR--EAMTRARALRSQSEESASAFSADDL-MSIDLAEQMANDSDDSISAATN 567
++E R E R +S+ E S + S +D E + D +
Sbjct: 535 KEDKETSAKRGKEITGVKRQSKSEHETSDAKKSVEDRGKRCPTPEIQKKSTGDVPHTSVT 594
Query: 568 KGRGRGRG-RRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSE 614
G G+ + G+ ++ R G+ R + R + R T+ SE
Sbjct: 595 GDSGSGKPFKIKGQPESGILRTGTFREDTDDTERNKAQREPLTRARSE 642
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 40.4 bits (93), Expect = 0.005
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 14/288 (4%)
Query: 339 KIEEMLE--NAERERLG--NSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKD 394
+++E +E + + ER+G N P +P+ + D S +P ++ + +DR P
Sbjct: 357 EVDENIELISGQNERMGPLNISTPVEPVAASKSDVSPIIQPVPSIKNVPQ-IDRTKKPAV 415
Query: 395 IIHFFRHREQKEKTGEEINF---GKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTE 451
+ HR + E T E GK+I S + L+ + A + + +LL E
Sbjct: 416 KLPE-EHRIKSESTNHEQQSPQSGKVIPDRSTKPVVFSPTLMLTDEEKARIHAETALLME 474
Query: 452 RGMGEA-VQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETRQK 510
+ E ++E +E+K+ + + + Q K ++ +E I + K EE+ + + K
Sbjct: 475 KNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQAK 534
Query: 511 NTNEEDDEVR--EAMTRARALRSQSEESASAFSADDL-MSIDLAEQMANDSDDSISAATN 567
++E R E R +S+ E S + S +D E + D +
Sbjct: 535 KEDKETSAKRGKEITGVKRQSKSEHETSDAKKSVEDRGKRCPTPEIQKKSTGDVPHTSVT 594
Query: 568 KGRGRGRG-RRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSE 614
G G+ + G+ ++ R G+ R + R + R T+ SE
Sbjct: 595 GDSGSGKPFKIKGQPESGILRTGTFREDTDDTERNKAQREPLTRARSE 642
>gi|156071420 hypothetical protein LOC728912 [Homo sapiens]
Length = 790
Score = 39.3 bits (90), Expect = 0.012
Identities = 34/151 (22%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEK---- 467
++ G L ++ +E L + + K Q AEK Q L E+ V F+ K++
Sbjct: 199 VSAGPLSSEKAEMNILEINE--KLCPQLAEKKQQFRSLKEKCFVTQVACFLAKQQNKYKY 256
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ ++L+K L ++F +E+ + L+ EE+R+++ ++++ + +++RE
Sbjct: 257 EECKDLIKSMLRNERQFKEEKLAEQLKQA--EELRQYKVLVHSQERELTQLREKLREGRD 314
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + D DL EQ+A
Sbjct: 315 ASRSLNEHLQALLTPDEPDKSQGQDLQEQLA 345
>gi|119709825 neuroblastoma breakpoint family, member 11-like [Homo
sapiens]
Length = 790
Score = 39.3 bits (90), Expect = 0.012
Identities = 34/151 (22%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEK---- 467
++ G L ++ +E L + + K Q AEK Q L E+ V F+ K++
Sbjct: 199 VSAGPLSSEKAEMNILEINE--KLCPQLAEKKQQFRSLKEKCFVTQVACFLAKQQNKYKY 256
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ ++L+K L ++F +E+ + L+ EE+R+++ ++++ + +++RE
Sbjct: 257 EECKDLIKSMLRNERQFKEEKLAEQLKQA--EELRQYKVLVHSQERELTQLREKLREGRD 314
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + D DL EQ+A
Sbjct: 315 ASRSLNEHLQALLTPDEPDKSQGQDLQEQLA 345
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 38.9 bits (89), Expect = 0.016
Identities = 67/359 (18%), Positives = 141/359 (39%), Gaps = 76/359 (21%)
Query: 328 VTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVD 387
+ +A + K EE+L+ AE E+LG +++ +++ + QK +
Sbjct: 687 IGKAFDKKTVPKEEELLKRAEAEKLG--------IIKAKME-----------EYFQKVAE 727
Query: 388 RVANPKDIIHFFRHREQKEKTGEE-------------INFGKL-ITKPSEGTTLRVEDLV 433
V I+ ++ +++E+ GE+ ++F K I+ SE +TL +
Sbjct: 728 TVTK---ILRKYKDTKKEEQVGEKPIKQKKVVSFMPGLHFQKSPISAKSESSTLLSYEST 784
Query: 434 KQYFQTAEKNVQLSLLTERGMG--EAVQEFVDKEEKDAIEELV------------KYQLE 479
+ + + +ER + VQ+ ++EK E+ + K QL
Sbjct: 785 DPVINNLIQMILAEIESERDIPTVSTVQKDHKEKEKQRQEQYLQEGQEQMSGMSLKQQLL 844
Query: 480 KTQRFLKERHIDALEDKIDE-----EVRRFRETRQKNTNEEDDEV-REAMTRARALRSQS 533
+ LKE H + + + +E +++ ++ +Q +++E+ +E +A +++
Sbjct: 845 GERNLLKE-HYEKISENWEEKKAWLQMKEGKQEQQSQKQWQEEEMWKEEQKQATPKQAEQ 903
Query: 534 EESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQ-----NSASRG 588
EE ++ E++ S + T K + +G GQ A
Sbjct: 904 EEKQKQRGQEE-------EELPKSSLQRLEEGTQKMKTQGLLLEKENGQMRQIQKEAKHL 956
Query: 589 GSQRGRAFKSTRQQPSRN-------VTTKNYSEVIEVDESDVEEDIFPTTSKTDQRWSS 640
G R R +Q+P R + TK+ ++ E ++E+ + T RW S
Sbjct: 957 GPHRRREKGKEKQKPERGLEDLERQIKTKDQMQMKETQPKELEKMVIQTPMTLSPRWKS 1015
>gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo
sapiens]
Length = 4621
Score = 38.9 bits (89), Expect = 0.016
Identities = 31/151 (20%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEK---- 467
++ G ++ +E L + + ++ Q AE Q L ER + F+ ++K
Sbjct: 3 VSAGPWSSEKAEMNILEINEKLRP--QLAENKQQFGNLKERCFVTQLAGFLANQQKKYNY 60
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ ++L+K+ L ++F +E+ + L+ EE+R+++ ++++ + +++RE
Sbjct: 61 EECKDLIKFMLRNERQFKEEKLAEQLKQA--EELRQYKVLVHSQERELTQLREKLREGRD 118
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + D DL EQ+A
Sbjct: 119 ASRSLNEHLQALLTLDEPDKSQGQDLQEQLA 149
>gi|239741297 PREDICTED: neuroblastoma breakpoint family, member 9
[Homo sapiens]
Length = 299
Score = 38.9 bits (89), Expect = 0.016
Identities = 32/151 (21%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEK---- 467
++ G L ++ +E L + + ++ Q AEK Q L E+ + F+ K++
Sbjct: 3 VSAGPLSSEKAEMNILEINEKLRP--QLAEKKQQFRSLKEKCFVTQLAGFLAKQQNKYKY 60
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ ++L+K L +F +E+ + L+ EE+R+++ ++++ + +++RE
Sbjct: 61 EECKDLIKSMLRNELQFKEEKLAEQLKQA--EELRQYKVLVHSQERELTQLREKLREGRD 118
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + D DL EQ+A
Sbjct: 119 ASRSLNEHLQALLTPDEPDKSQGQDLQEQLA 149
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 38.9 bits (89), Expect = 0.016
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 515 EDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGR 574
ED ++ +A+A + +EES S+ S+ S + ++ S S + +G G
Sbjct: 2536 EDSGNPKSPDKAQAEQDGAEESESSSSSSSGSS---SSSSSSSSSGSETEGEEEGDKNGD 2592
Query: 575 GRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTSKT 634
G G G+N S S+ S+ S + ++ + S S ++S +
Sbjct: 2593 GGCGTGGRN-CSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2651
Query: 635 DQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDD 667
SS+SSS S S S D +SS DD+
Sbjct: 2652 SSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDE 2684
>gi|92110019 hypothetical protein LOC55672 [Homo sapiens]
Length = 1214
Score = 38.9 bits (89), Expect = 0.016
Identities = 33/151 (21%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV----DKEEK 467
++ G L ++ +E L + + ++ Q AEK Q L E+ + F+ +K +
Sbjct: 274 VSAGPLSSEKAEMNILEMNEKLRP--QLAEKKQQFRNLKEKCFVTQLAGFLANQQNKYKY 331
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ E+L+K L ++F +E+ + L+ EE+R+++ ++++ + +++RE
Sbjct: 332 EECEDLIKSMLRNERQFKEEKLAEQLKQA--EELRQYKVLVHSQERELTQLREKLREGRD 389
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + D DL EQ+A
Sbjct: 390 ASRSLNQHLQALLTPDEPDKSQGQDLQEQLA 420
Score = 37.0 bits (84), Expect = 0.060
Identities = 30/151 (19%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEK---- 467
++ G ++ +E L + + ++ Q AE Q L E+ + F+ +K
Sbjct: 3 VSAGPWSSEKAETNILEINEKLRP--QLAENKQQFRNLKEKCFVTQLAGFLANRQKKYKY 60
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ ++L+K+ L ++F +E+ + L+ EE+R+++ ++++ + +++RE
Sbjct: 61 EECKDLIKFMLRNERQFKEEKLAEQLKQA--EELRQYKVLVHSQERELTQLREKLREGRD 118
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + D DL EQ+A
Sbjct: 119 ASRSLNQHLQALLTPDEPDKSQGQDLQEQLA 149
Score = 35.8 bits (81), Expect = 0.13
Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV----DKEEK 467
++ G L ++ +E L + + ++ Q AEK Q L E+ + F+ +K +
Sbjct: 545 VSAGPLSSEKAEMNILEMNEKLRP--QLAEKKQQFRNLKEKCFVTQLACFLANQQNKYKY 602
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ ++L+K L ++F +E+ + L+ EE+R+++ ++++ + +++RE
Sbjct: 603 EECKDLIKSVLRNERQFKEEKLAEQLKQA--EELRQYKVLVHSQERELTQLREKLREGRD 660
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + D DL EQ+A
Sbjct: 661 ASRSLNQHLQALLTPDEPDKSQGQDLQEQLA 691
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 38.5 bits (88), Expect = 0.021
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 376 FSVLRFSQKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITKPSEGTTLRVEDLVKQ 435
F+ +F K +D+ A P + + R R K + +L + + T+ V+ + Q
Sbjct: 250 FNDKKFVIKPIDKKA-PDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQ 308
Query: 436 YFQTA-EKNVQLSLLT----ERGMGEAVQEFVDKEEKDAIEEL--VKYQLEKTQRFLKER 488
+ +K ++ ++L +R M E +E +++E+++ +E L ++ Q +K Q+ L+E+
Sbjct: 309 AREEKHQKQMERAMLENEKKKREMAEKEKEKIEREKEELMERLKQIEEQTKKAQQELEEQ 368
Query: 489 HIDALEDKIDEEVRRFRETRQKNTNE--EDDEVREAMTRARALRSQSEESASAFSADDLM 546
ALE +++E +R + +K E E +E +EA+ +A + +++E + A+
Sbjct: 369 TRRALE--LEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTA 426
Query: 547 SIDLAEQMANDSDDS 561
I E MA +S
Sbjct: 427 RISQLE-MARQKKES 440
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 38.5 bits (88), Expect = 0.021
Identities = 29/122 (23%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 451 ERGMGEAVQEFVDKEEKDAIEEL--VKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETR 508
+R + E +E +++E+++ +E L ++ Q K Q+ L+E+ ALE +D+E +R +E
Sbjct: 329 KREIAEKEKERIEREKEELMERLKQIEEQTIKAQKELEEQTRKALE--LDQERKRAKEEA 386
Query: 509 QKNTNEE--DDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAAT 566
++ E +E + A+ + A + +++E +A A+ I L E+ ++ +
Sbjct: 387 ERLEKERRAAEEAKSAIAKQAADQMKNQEQLAAELAEFTAKIALLEEAKKKKEEEATEWQ 446
Query: 567 NK 568
+K
Sbjct: 447 HK 448
>gi|92859701 myosin VI [Homo sapiens]
Length = 1285
Score = 38.5 bits (88), Expect = 0.021
Identities = 66/315 (20%), Positives = 129/315 (40%), Gaps = 39/315 (12%)
Query: 383 QKFVDRVANPKDIIHFFRHREQKEKTGEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEK 442
+K +D+ ++ + K+ EI+ L+ K + T + E + K+Y +
Sbjct: 847 KKRLDKFNEVVSVLKDGKPEMNKQIKNLEISIDTLMAK-IKSTMMTQEQIQKEYDALVKS 905
Query: 443 NVQL-SLLTERGMGEA-------VQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALE 494
+ +L S L ++ E +QE ++KE K E+ + + E+ +R +K
Sbjct: 906 SEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMK-------- 957
Query: 495 DKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEES-ASAFSADDLMSIDLAEQ 553
++ E +R +E ++ E+D++ +A A+ R + EES A + +LA +
Sbjct: 958 --LEMEAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEESQQQAVLEQERRDRELALR 1015
Query: 554 MANDSDDSIS--AATNKGRGRGRGRRGGRGQNSASRGGSQ---RGRAFKSTRQQPSR--- 605
+A + IS A + R G R ++ S+ RG A +T+
Sbjct: 1016 IAQSEAELISDEAQADLALRRNDGTRPKMTPEQMAKEMSEFLSRGPAVLATKAAAGTKKY 1075
Query: 606 NVTTKNYSEVIEV--DESDVE-----EDIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDF 658
+++ Y+E+ + D+E + F K W S + + Q +
Sbjct: 1076 DLSKWKYAELRDTINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRNTETEQRAP---- 1131
Query: 659 ESSEDDDDDPFMNTS 673
+S D D PF+N S
Sbjct: 1132 KSVTDYDFAPFLNNS 1146
>gi|83415174 hypothetical protein LOC400818 [Homo sapiens]
Length = 942
Score = 38.1 bits (87), Expect = 0.027
Identities = 31/151 (20%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 412 INFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEK---- 467
++ G ++ +E L + + ++ Q AE Q L ER + F+ +K
Sbjct: 3 VSAGPWSSEKAEMNILEINEKLRP--QLAENKQQFGNLKERCFLTQLAGFLANRQKKYKY 60
Query: 468 DAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFR---ETRQKNTNEEDDEVREAMT 524
+ ++L+K+ L ++F +E+ + L+ EE+R+++ ++++ + +++RE
Sbjct: 61 EECKDLIKFMLRNERQFKEEKLAEQLKQA--EELRQYKVLVHSQERELTQLKEKLREGRD 118
Query: 525 RARALRSQSEESASAFSADDLMSIDLAEQMA 555
+R+L + + D DL EQ+A
Sbjct: 119 ASRSLNEHLQALLTPDEPDKSQGQDLQEQLA 149
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 37.4 bits (85), Expect = 0.046
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 13/169 (7%)
Query: 506 ETRQKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAA 565
++ N DD + + ++ S S+ S S+ S+D S D +DS DS S++
Sbjct: 525 DSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSD------SDSSDSNSSS 578
Query: 566 TNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSEVIEVDESDVEE 625
+ +S+ S + S+ S + + + S + D S E
Sbjct: 579 DSDS-------SDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSES 631
Query: 626 DIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTSS 674
D + SK+D S++S S S S S S D D ++SS
Sbjct: 632 DSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSS 680
Score = 35.4 bits (80), Expect = 0.17
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 1/144 (0%)
Query: 530 RSQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGG 589
+S S +S S S D S D ++ ++DS D+ ++ + + +S
Sbjct: 623 KSDSSKSESDSSDSDSKS-DSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSS 681
Query: 590 SQRGRAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQ 649
+ S S + + + S+ + D SD + +S +D SS SS S
Sbjct: 682 DSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSS 741
Query: 650 SQVSKGVDFESSEDDDDDPFMNTS 673
SS+ D N+S
Sbjct: 742 DSSDSSDSSNSSDSSDSSDSSNSS 765
Score = 35.0 bits (79), Expect = 0.23
Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 4/142 (2%)
Query: 533 SEESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQR 592
S S S+ S+D S D ++ ++DS DS +++ + +++S
Sbjct: 951 SNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSS 1010
Query: 593 GRAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQSQV 652
+ S S + + N S+ + +S D ++ +D S++SS S
Sbjct: 1011 DSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD----SSNSSDSSDSSDS 1066
Query: 653 SKGVDFESSEDDDDDPFMNTSS 674
S D S D D + SS
Sbjct: 1067 SDSSDSSDSSDSSDSSESSDSS 1088
Score = 34.7 bits (78), Expect = 0.30
Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 4/164 (2%)
Query: 511 NTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNKGR 570
++NE + + + + S+ S S+ S+D S D +E +N SD+S S ++
Sbjct: 884 DSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSES-SNSSDNSNS--SDSSN 940
Query: 571 GRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPT 630
+S S S + S+ S + + N S+ + +S D +
Sbjct: 941 SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDS 1000
Query: 631 TSKTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTSS 674
++ +D SS SS + S S D +S D D + SS
Sbjct: 1001 SNSSDSSDSSDSSDS-SNSSDSSNSSDSSNSSDSSDSSDSSDSS 1043
Score = 33.5 bits (75), Expect = 0.66
Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 7/179 (3%)
Query: 495 DKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQM 554
D D ++ ++++ D + + S+ S S+ S+D S + +
Sbjct: 570 DSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKS 629
Query: 555 ANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSE 614
+DS DS S + + NS S S + S+ S + + + S+
Sbjct: 630 ESDSSDSDSKSDSSD-----SNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSD--SSSSSD 682
Query: 615 VIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTS 673
+S D ++ +D SS S S S S S D +SS D N+S
Sbjct: 683 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSS 741
Score = 33.5 bits (75), Expect = 0.66
Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 6/169 (3%)
Query: 508 RQKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDS--ISAA 565
R ++N D + + S+ + S+ S+D S + ++ ++DS +S S +
Sbjct: 858 RSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDS 917
Query: 566 TNKGRGRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSEVIEVDESDVEE 625
+N +S S S + S+ S N + + S D SD
Sbjct: 918 SNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSS----DSSDSNS 973
Query: 626 DIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFESSEDDDDDPFMNTSS 674
+S + S+ SS S S D S D D + SS
Sbjct: 974 SDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSS 1022
Score = 32.7 bits (73), Expect = 1.1
Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 555 ANDSDDSISAATNKGRGRGRGRRG---------GRGQNSASRGGSQRGRAFKSTRQQPSR 605
A D D ++ TN G G G G+G++ +S S +
Sbjct: 510 AEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDS 569
Query: 606 NVTTKNYSEVIEVDESDVEE----DIFPTTSKTDQRWSSTSSSKIMSQSQVSKGVDFESS 661
+ + N S + +SD + D +++ +D SS SS S D S
Sbjct: 570 DSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKS 629
Query: 662 EDDDDDPFMNTSSLRRN 678
E D D + S N
Sbjct: 630 ESDSSDSDSKSDSSDSN 646
Score = 32.7 bits (73), Expect = 1.1
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Query: 533 SEESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQR 592
S+ S S+ S+D S D ++ ++DS DS ++ ++ +S S S
Sbjct: 693 SDSSNSSESSD---SSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDS 749
Query: 593 GRAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPTTSKTDQRWSSTSSSKIMSQSQV 652
+ S+ S N + + S D SD + +S ++ +S+ SS + S
Sbjct: 750 SNSSDSSDSSDSSNSSDSSDSS----DSSDSSDS--SNSSDSNDSSNSSDSSDSSNSSDS 803
Query: 653 SKGVDFESSEDDDDDPFMNTS 673
S D S D D N+S
Sbjct: 804 SNSSDSSDSSDSSDSDSSNSS 824
Score = 30.0 bits (66), Expect = 7.3
Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 5/169 (2%)
Query: 511 NTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNKGR 570
++N D + + + S+ S S+ S+D S ++DS DS ++ +
Sbjct: 938 SSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDS 997
Query: 571 GRGRGRRGGRGQNSASRGGSQRGRAFKSTRQQPSRNVTTKNYSEVIEVDESDVEEDIFPT 630
+ +S + + S S + + + S+ + +S D +
Sbjct: 998 SDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNS 1057
Query: 631 TSKTDQRWSSTS-----SSKIMSQSQVSKGVDFESSEDDDDDPFMNTSS 674
+ +D SS S SS S+ S D +S D D + SS
Sbjct: 1058 SDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSS 1106
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 37.4 bits (85), Expect = 0.046
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 429 VEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKY--QLEKTQRFLK 486
++DL + + E+ QL ER + + +D+E+K I EL K + ++TQ+
Sbjct: 280 IKDLESEKSRVNERLSQLE--EERAFLRSKTQSLDEEQKQQILELEKKVNEAKRTQQEYY 337
Query: 487 ERHIDALEDKIDEEVRRFRETRQKNTNE 514
ER + L+ +++EEV + E K E
Sbjct: 338 ERELKNLQSRLEEEVTQLNEAHSKTLEE 365
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 37.4 bits (85), Expect = 0.046
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 429 VEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKY--QLEKTQRFLK 486
++DL + + E+ QL ER + + +D+E+K I EL K + ++TQ+
Sbjct: 400 IKDLESEKSRVNERLSQLE--EERAFLRSKTQSLDEEQKQQILELEKKVNEAKRTQQEYY 457
Query: 487 ERHIDALEDKIDEEVRRFRETRQKNTNE 514
ER + L+ +++EEV + E K E
Sbjct: 458 ERELKNLQSRLEEEVTQLNEAHSKTLEE 485
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 37.0 bits (84), Expect = 0.060
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 33/138 (23%)
Query: 429 VEDLVKQYFQTAEKNVQLSLLTERGMGEAV---QEFVDKEEKDAIEELVKYQLEKTQRFL 485
V D V Y+ T +KN L R G+ Q+ +++ +EE + + EKT++
Sbjct: 471 VPDCVLYYYLT-KKNENYKALVRRNYGKRRGRNQQIARPSQEEKVEEKEEDKAEKTEK-- 527
Query: 486 KERHIDALEDKIDEEVRRFRETRQKNTNEEDD--------EVREAMT------------- 524
KE E+K DEE + +E ++NT E+D E RE T
Sbjct: 528 KE------EEKKDEEEKDEKEDSKENTKEKDKIDGTAEETEEREQATPRGRKTANSQGRR 581
Query: 525 RARALRSQSEESASAFSA 542
+ R RS + E+A+A +A
Sbjct: 582 KGRITRSMTNEAAAASAA 599
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 36.6 bits (83), Expect = 0.078
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 464 KEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAM 523
++E+ +E +K K F+KER + + K+D + F E R + T +E R+
Sbjct: 2085 RDERKLTQEEIKMTKMKRALFVKERRLSIEQSKLDIKEWDFSEKRSELTKDEKKLARKQR 2144
Query: 524 TRARALR-------SQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGR 576
A +R +EE + + +D E+ + ++ I + R R +
Sbjct: 2145 KLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIEEEEVIPFLKRRWRKRKEAK 2204
Query: 577 RGGRGQNSAS 586
RG + + S
Sbjct: 2205 RGDKPKEKFS 2214
Score = 35.4 bits (80), Expect = 0.17
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 337 LEKIEEMLENAERERLGNSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDII 396
+ K E+M E E +L H V L + GG E V+ F ++ + K
Sbjct: 2154 INKEEKMTE--EESKLARKHSE----VILDDEEEGGIEEEEVIPFLKRRWRKRKEAK--- 2204
Query: 397 HFFRHREQKEKTGEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGE 456
R + KEK +++ + SE +++L KQ ++E+ + ER E
Sbjct: 2205 ---RGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEE 2261
Query: 457 AVQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEED 516
+E +++E++ EE Q+EK + K++ + ++++ E+ F E + + EE
Sbjct: 2262 VREEEEERKEEEEGEEK---QVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEET 2318
Query: 517 DEVREAMTRARALRSQSEESAS 538
+ + + + EES S
Sbjct: 2319 ESLSD--------EEEEEESCS 2332
Score = 30.0 bits (66), Expect = 7.3
Identities = 52/266 (19%), Positives = 108/266 (40%), Gaps = 28/266 (10%)
Query: 380 RFSQKFVDRVANPKDIIHFFRHREQ-KEKTGEEINFGKLITKPSEGTTLRVEDLVKQYFQ 438
+ +Q+ + + N + + H + Q K K G F K++ + E T E ++K+ +
Sbjct: 1852 KLAQRKENLLYNKERLTHSKKQLVQVKNKLGM---FNKILAQVEEKLTQEKETVIKKKEK 1908
Query: 439 TAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQLEKT-----QRFLKERHIDAL 493
AE TE+ + + K+EK A +E +K LEK +R E I
Sbjct: 1909 LAE--------TEKKLVQVEDSLAKKQEKLA-QEKMKLALEKAMVQGKKRLRGELDIAKE 1959
Query: 494 EDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQSEESASAFSADDLMSIDLAEQ 553
E ++ E++R E + + ++ + R ++ F + L E+
Sbjct: 1960 EKALNLEMKRLAEEKMRLVEGKETLSKGETPETSRQRKMTQVEQELFE----RKLSLEEK 2015
Query: 554 MANDSDDSISAATNK-GRGRGRGRRGGR----GQNSASRGGSQRGRAFKSTRQQPSR-NV 607
+ D ++ ++ +G+ RG R GQ ++ + + +S ++P++ N
Sbjct: 2016 ILLHEDRILAMEESEIAKGKLEFTRGQRIFVQGQRKLAKASRKLIKKRESLSKEPAKLNK 2075
Query: 608 TTKNYSEVIEVDESDVEEDIFPTTSK 633
K ++ + +E+I T K
Sbjct: 2076 ILKALQKLTRDERKLTQEEIKMTKMK 2101
>gi|27436948 lamin A/C isoform 3 [Homo sapiens]
Length = 634
Score = 36.6 bits (83), Expect = 0.078
Identities = 50/230 (21%), Positives = 83/230 (36%), Gaps = 32/230 (13%)
Query: 409 GEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFVDKEEKD 468
G++ F + + + ED V+QY + EK L R E V
Sbjct: 232 GKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGA---- 287
Query: 469 AIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEVREAMTRARA 528
A EEL + ++ ID+L ++ + ++ K + ED RE T R
Sbjct: 288 AHEELQQSRIR----------IDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRL 337
Query: 529 LRSQSEESASAFSA--------DDLMSIDLA--------EQMANDSDDSISAATNKGRGR 572
L + E A + +L+ I LA ++ ++ + + + R
Sbjct: 338 LAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQR 397
Query: 573 GRGRRGGRGQNSASRGGSQRGRAFKST--RQQPSRNVTTKNYSEVIEVDE 620
RGR + G + R +ST R S++ T V EVDE
Sbjct: 398 SRGRASSHSSQTQGGGSVTKKRKLESTESRSSFSQHARTSGRVAVEEVDE 447
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,756,835
Number of Sequences: 37866
Number of extensions: 1122205
Number of successful extensions: 6887
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 322
Number of HSP's that attempted gapping in prelim test: 6063
Number of HSP's gapped (non-prelim): 993
length of query: 680
length of database: 18,247,518
effective HSP length: 109
effective length of query: 571
effective length of database: 14,120,124
effective search space: 8062590804
effective search space used: 8062590804
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.