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Search of human proteins with 242332558
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|242332558 tRNA-yW synthesizing protein 3 homolog isoform 2
[Homo sapiens]
(226 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|242332558 tRNA-yW synthesizing protein 3 homolog isoform 2 [H... 462 e-130
gi|42734381 tRNA-yW synthesizing protein 3 homolog isoform 1 [Ho... 445 e-125
gi|54607116 leiomodin 3 (fetal) [Homo sapiens] 38 0.008
gi|19923899 coiled-coil domain containing 45 [Homo sapiens] 35 0.040
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 33 0.15
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 33 0.15
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 33 0.15
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 33 0.15
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 33 0.15
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 33 0.15
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 33 0.15
gi|29789405 hypothetical protein LOC284565 [Homo sapiens] 33 0.20
gi|157266285 hypothetical protein LOC728936 [Homo sapiens] 33 0.20
gi|224589132 hypothetical protein LOC100132406 [Homo sapiens] 33 0.26
gi|7657017 hypothetical protein LOC25832 [Homo sapiens] 32 0.34
gi|239741297 PREDICTED: neuroblastoma breakpoint family, member ... 32 0.44
gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo ... 31 0.75
gi|169162915 PREDICTED: hypothetical protein LOC728841 [Homo sap... 31 0.75
gi|156071420 hypothetical protein LOC728912 [Homo sapiens] 31 0.75
gi|119709825 neuroblastoma breakpoint family, member 11-like [Ho... 31 0.75
gi|5803078 mucosa associated lymphoid tissue lymphoma translocat... 31 0.98
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 31 0.98
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 31 0.98
gi|41281753 NIMA-related kinase 11 isoform 2 [Homo sapiens] 30 1.3
gi|225637562 NIMA-related kinase 11 isoform 3 [Homo sapiens] 30 1.3
gi|225637560 NIMA-related kinase 11 isoform 1 [Homo sapiens] 30 1.3
gi|13514831 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapi... 30 1.3
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 30 1.7
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 30 1.7
gi|150170718 zinc finger protein 292 [Homo sapiens] 30 1.7
>gi|242332558 tRNA-yW synthesizing protein 3 homolog isoform 2 [Homo
sapiens]
Length = 226
Score = 462 bits (1189), Expect = e-130
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 MDRSAEFRKWKAQCLSKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGI 60
MDRSAEFRKWKAQCLSKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGI
Sbjct: 1 MDRSAEFRKWKAQCLSKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGI 60
Query: 61 NGFEVQKQNCCWLLVTHKLCVKDDVHSMAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVP 120
NGFEVQKQNCCWLLVTHKLCVKDDVHSMAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVP
Sbjct: 61 NGFEVQKQNCCWLLVTHKLCVKDDVHSMAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVP 120
Query: 121 LSHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNN 180
LSHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNN
Sbjct: 121 LSHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNN 180
Query: 181 SSYIHKKKRNPEKTRAQCITKESDEELENDDDDDLGINVTIFPEDY 226
SSYIHKKKRNPEKTRAQCITKESDEELENDDDDDLGINVTIFPEDY
Sbjct: 181 SSYIHKKKRNPEKTRAQCITKESDEELENDDDDDLGINVTIFPEDY 226
>gi|42734381 tRNA-yW synthesizing protein 3 homolog isoform 1 [Homo
sapiens]
Length = 259
Score = 445 bits (1145), Expect = e-125
Identities = 226/259 (87%), Positives = 226/259 (87%), Gaps = 33/259 (12%)
Query: 1 MDRSAEFRKWKAQCLSKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGI 60
MDRSAEFRKWKAQCLSKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGI
Sbjct: 1 MDRSAEFRKWKAQCLSKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGI 60
Query: 61 NGFEVQKQNCCWLLVTHKLCVKDDV---------------------------------HS 87
NGFEVQKQNCCWLLVTHKLCVKDDV HS
Sbjct: 61 NGFEVQKQNCCWLLVTHKLCVKDDVIVALKKANGDATLKFEPFVLHVQCRQLQDAQILHS 120
Query: 88 MAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLNVANQKMEE 147
MAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLNVANQKMEE
Sbjct: 121 MAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLNVANQKMEE 180
Query: 148 NKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRNPEKTRAQCITKESDEEL 207
NKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRNPEKTRAQCITKESDEEL
Sbjct: 181 NKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRNPEKTRAQCITKESDEEL 240
Query: 208 ENDDDDDLGINVTIFPEDY 226
ENDDDDDLGINVTIFPEDY
Sbjct: 241 ENDDDDDLGINVTIFPEDY 259
>gi|54607116 leiomodin 3 (fetal) [Homo sapiens]
Length = 560
Score = 37.7 bits (86), Expect = 0.008
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 128 MVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYIHKK 187
M+ EE + + +K +E + IE+ N+ +KEK N+ + K
Sbjct: 84 MLEEERVPVTFVKSEEKTQEEHEEIEK------------RNKNMAQYLKEKLNNEIVANK 131
Query: 188 KRNPEKTRAQCITKESDEELENDDDDDLG 216
+ + + Q T E DEE E+DDDDD G
Sbjct: 132 RESKGSSNIQ-ETDEEDEEEEDDDDDDEG 159
>gi|19923899 coiled-coil domain containing 45 [Homo sapiens]
Length = 821
Score = 35.4 bits (80), Expect = 0.040
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 127 LMVTEEYIDFLLNVANQKMEENKKR-------IERFYNCLQHALERETMTNLHPKIK--E 177
L + ++ + L N A +K +E ++R +E +Y Q +L E ++ H ++K E
Sbjct: 700 LNIQKQRLRDLRNYAKEKRDEQRRRHQDELDSMENYYKD-QFSLLAEAISQEHQELKARE 758
Query: 178 KNNSSYIHKKKRNPEKTRAQCITKESDEELENDDD 212
K+ + +HK KR + I + D +NDDD
Sbjct: 759 KSQAQTLHKVKRELRSKMEKEIQQLQDMITQNDDD 793
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 33.5 bits (75), Expect = 0.15
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 122 SHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIK--EKN 179
SH +L VTEE I+ L +EE+++ E+ + +ERE T + P ++ E+
Sbjct: 523 SHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEM 582
Query: 180 NSSYIHK-KKRNPEKTRAQCITKESDEEL 207
SSY + N EK +E+ EE+
Sbjct: 583 KSSYCSVIENMNKEKAFLFEKYQEAQEEI 611
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 33.5 bits (75), Expect = 0.15
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 122 SHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIK--EKN 179
SH +L VTEE I+ L +EE+++ E+ + +ERE T + P ++ E+
Sbjct: 512 SHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEM 571
Query: 180 NSSYIHK-KKRNPEKTRAQCITKESDEEL 207
SSY + N EK +E+ EE+
Sbjct: 572 KSSYCSVIENMNKEKAFLFEKYQEAQEEI 600
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 33.5 bits (75), Expect = 0.15
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 122 SHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIK--EKN 179
SH +L VTEE I+ L +EE+++ E+ + +ERE T + P ++ E+
Sbjct: 491 SHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEM 550
Query: 180 NSSYIHK-KKRNPEKTRAQCITKESDEEL 207
SSY + N EK +E+ EE+
Sbjct: 551 KSSYCSVIENMNKEKAFLFEKYQEAQEEI 579
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 33.5 bits (75), Expect = 0.15
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 122 SHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIK--EKN 179
SH +L VTEE I+ L +EE+++ E+ + +ERE T + P ++ E+
Sbjct: 520 SHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEM 579
Query: 180 NSSYIHK-KKRNPEKTRAQCITKESDEEL 207
SSY + N EK +E+ EE+
Sbjct: 580 KSSYCSVIENMNKEKAFLFEKYQEAQEEI 608
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 33.5 bits (75), Expect = 0.15
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 122 SHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIK--EKN 179
SH +L VTEE I+ L +EE+++ E+ + +ERE T + P ++ E+
Sbjct: 520 SHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEM 579
Query: 180 NSSYIHK-KKRNPEKTRAQCITKESDEEL 207
SSY + N EK +E+ EE+
Sbjct: 580 KSSYCSVIENMNKEKAFLFEKYQEAQEEI 608
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 33.5 bits (75), Expect = 0.15
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 122 SHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIK--EKN 179
SH +L VTEE I+ L +EE+++ E+ + +ERE T + P ++ E+
Sbjct: 520 SHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEM 579
Query: 180 NSSYIHK-KKRNPEKTRAQCITKESDEEL 207
SSY + N EK +E+ EE+
Sbjct: 580 KSSYCSVIENMNKEKAFLFEKYQEAQEEI 608
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 33.5 bits (75), Expect = 0.15
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 102 GKRGKTMLAVRSTHGLEVPLSHKGK------LMVTEEYIDFLLNVAN--QKMEENKKRIE 153
G R M + T + +P++H L T E D + N A + ++ +K
Sbjct: 465 GSRNFKMAKLEDTRNVGMPVAHMESPERYLHLKPTIEMKDSVPNKAGGMKDVQTSKAAEH 524
Query: 154 RFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRNPEKTRAQCITKESDEELENDDDD 213
+ ERE N P+++E+ KK RN E + I + ++ E+DDDD
Sbjct: 525 DLEVASEEEQEREGSENNQPQVEEER------KKHRNNEMEVSANIHDGATDDAEDDDDD 578
Query: 214 D 214
D
Sbjct: 579 D 579
>gi|29789405 hypothetical protein LOC284565 [Homo sapiens]
Length = 670
Score = 33.1 bits (74), Expect = 0.20
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 28/123 (22%)
Query: 124 KGKLMVTEEYIDFLLNVANQ----KMEENKKRIE--RFYNCLQHALERETMTNLHPKIKE 177
K K ++ I F+L Q K+ E K+ E R Y L HA ERE +T L K++E
Sbjct: 57 KYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERE-LTQLREKLRE 115
Query: 178 KNNSSYIHKKKRN-------PEKTRAQCITKESDE--------------ELENDDDDDLG 216
++S + P+K++ Q + ++ E E +NDDD+D+
Sbjct: 116 GRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLTQHLVQKLSPENDNDDDEDVQ 175
Query: 217 INV 219
+ V
Sbjct: 176 VEV 178
>gi|157266285 hypothetical protein LOC728936 [Homo sapiens]
Length = 670
Score = 33.1 bits (74), Expect = 0.20
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 28/123 (22%)
Query: 124 KGKLMVTEEYIDFLLNVANQ----KMEENKKRIE--RFYNCLQHALERETMTNLHPKIKE 177
K K ++ I F+L Q K+ E K+ E R Y L HA ERE +T L K++E
Sbjct: 57 KYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERE-LTQLREKLRE 115
Query: 178 KNNSSYIHKKKRN-------PEKTRAQCITKESDE--------------ELENDDDDDLG 216
++S + P+K++ Q + ++ E E +NDDD+D+
Sbjct: 116 GRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLTQHLVQKLSPENDNDDDEDVQ 175
Query: 217 INV 219
+ V
Sbjct: 176 VEV 178
>gi|224589132 hypothetical protein LOC100132406 [Homo sapiens]
Length = 3628
Score = 32.7 bits (73), Expect = 0.26
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 28/123 (22%)
Query: 124 KGKLMVTEEYIDFLLNVANQ----KMEENKKRIE--RFYNCLQHALERETMTNLHPKIKE 177
K K ++ I F+L Q K+ E K+ E R Y L HA ERE +T L K++E
Sbjct: 328 KYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERE-LTQLKEKLRE 386
Query: 178 KNNSSYIHKKKRN-------PEKTRAQCITKESDE--------------ELENDDDDDLG 216
++S + P+K++ Q + ++ E E +NDDD+D+
Sbjct: 387 GRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQ 446
Query: 217 INV 219
+ V
Sbjct: 447 VEV 449
>gi|7657017 hypothetical protein LOC25832 [Homo sapiens]
Length = 921
Score = 32.3 bits (72), Expect = 0.34
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 24/100 (24%)
Query: 143 QKMEENKKRIE--RFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRN-------PEK 193
+K+ E K+ E R Y L HA ERE +T L K++E ++S + P+K
Sbjct: 11 EKLAEQLKQAEELRQYKVLVHAQERE-LTQLREKLREGRDASRSLNEHLQALLTPDEPDK 69
Query: 194 TRAQCITKESDE--------------ELENDDDDDLGINV 219
++ Q + ++ E E +NDDD+D+ + V
Sbjct: 70 SQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEV 109
>gi|239741297 PREDICTED: neuroblastoma breakpoint family, member 9
[Homo sapiens]
Length = 299
Score = 32.0 bits (71), Expect = 0.44
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 24/105 (22%)
Query: 138 LNVANQKMEENKKRIE--RFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRN----- 190
L +K+ E K+ E R Y L H+ ERE +T L K++E ++S +
Sbjct: 75 LQFKEEKLAEQLKQAEELRQYKVLVHSQERE-LTQLREKLREGRDASRSLNEHLQALLTP 133
Query: 191 --PEKTRAQCITKESDE--------------ELENDDDDDLGINV 219
P+K++ Q + ++ E E +NDDD+D+ + V
Sbjct: 134 DEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEV 178
>gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo
sapiens]
Length = 4621
Score = 31.2 bits (69), Expect = 0.75
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 24/100 (24%)
Query: 143 QKMEENKKRIE--RFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRN-------PEK 193
+K+ E K+ E R Y L HA ERE +T L K++E ++S + P+K
Sbjct: 351 EKLAEQLKQAEELRQYKVLVHAQERE-LTQLREKLREGRDASRSLNEHLQALLTPDEPDK 409
Query: 194 TRAQCITKESDE--------------ELENDDDDDLGINV 219
++ Q + ++ E E +NDDD+D+ + +
Sbjct: 410 SQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEL 449
>gi|169162915 PREDICTED: hypothetical protein LOC728841 [Homo
sapiens]
Length = 3815
Score = 31.2 bits (69), Expect = 0.75
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 24/100 (24%)
Query: 143 QKMEENKKRIE--RFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRN-------PEK 193
+K+ E K+ E R Y L HA ERE +T L K++E ++S + P+K
Sbjct: 100 EKLAEQLKQAEELRQYKVLVHAQERE-LTQLREKLREGRDASRSLNEHLQALLTPDEPDK 158
Query: 194 TRAQCITKESDE--------------ELENDDDDDLGINV 219
++ Q + ++ E E +NDDD+D+ + +
Sbjct: 159 SQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEL 198
>gi|156071420 hypothetical protein LOC728912 [Homo sapiens]
Length = 790
Score = 31.2 bits (69), Expect = 0.75
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 24/100 (24%)
Query: 143 QKMEENKKRIE--RFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRN-------PEK 193
+K+ E K+ E R Y L H+ ERE +T L K++E ++S + P+K
Sbjct: 276 EKLAEQLKQAEELRQYKVLVHSQERE-LTQLREKLREGRDASRSLNEHLQALLTPDEPDK 334
Query: 194 TRAQCITKESDE--------------ELENDDDDDLGINV 219
++ Q + ++ E E +NDDD+D+ + V
Sbjct: 335 SQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEV 374
>gi|119709825 neuroblastoma breakpoint family, member 11-like [Homo
sapiens]
Length = 790
Score = 31.2 bits (69), Expect = 0.75
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 24/100 (24%)
Query: 143 QKMEENKKRIE--RFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRN-------PEK 193
+K+ E K+ E R Y L H+ ERE +T L K++E ++S + P+K
Sbjct: 276 EKLAEQLKQAEELRQYKVLVHSQERE-LTQLREKLREGRDASRSLNEHLQALLTPDEPDK 334
Query: 194 TRAQCITKESDE--------------ELENDDDDDLGINV 219
++ Q + ++ E E +NDDD+D+ + V
Sbjct: 335 SQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEV 374
>gi|5803078 mucosa associated lymphoid tissue lymphoma translocation
protein 1 isoform a [Homo sapiens]
Length = 824
Score = 30.8 bits (68), Expect = 0.98
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 118 EVPLSHKGKLMVTEEYID------FLLNVANQKMEENKKRIERFYNCLQHALE--RETMT 169
E+PL+H+ K + Y+D + +V N + ++ K++E A+E + +
Sbjct: 264 ELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIGRTDEAVECTEDELN 323
Query: 170 NL-HPKIKEKNNSSYIHKKK 188
NL HP KE+ + K K
Sbjct: 324 NLGHPDNKEQTTDQPLAKDK 343
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 30.8 bits (68), Expect = 0.98
Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 20/151 (13%)
Query: 81 VKDDVHSMAIDSGFRNSGITV---GKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEY---- 133
+KD+ HS F NS T+ K GKT+ + H HK ++ +E
Sbjct: 601 IKDEDHSPT----FENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTK 656
Query: 134 ---------IDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYI 184
++F + ++ + + F N +L E + L IK+ ++
Sbjct: 657 DSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKDDKSTKEK 716
Query: 185 HKKKRNPEKTRAQCITKESDEELENDDDDDL 215
H K K I KES++ + DL
Sbjct: 717 HVSKERNFKEERDKIKKESEKSFREEKIKDL 747
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 30.8 bits (68), Expect = 0.98
Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 20/151 (13%)
Query: 81 VKDDVHSMAIDSGFRNSGITV---GKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEY---- 133
+KD+ HS F NS T+ K GKT+ + H HK ++ +E
Sbjct: 624 IKDEDHSPT----FENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTK 679
Query: 134 ---------IDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYI 184
++F + ++ + + F N +L E + L IK+ ++
Sbjct: 680 DSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKDDKSTKEK 739
Query: 185 HKKKRNPEKTRAQCITKESDEELENDDDDDL 215
H K K I KES++ + DL
Sbjct: 740 HVSKERNFKEERDKIKKESEKSFREEKIKDL 770
>gi|41281753 NIMA-related kinase 11 isoform 2 [Homo sapiens]
Length = 470
Score = 30.4 bits (67), Expect = 1.3
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 126 KLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYIH 185
KL +E L + +K EEN KR++ + ++ ++ LH EK + +
Sbjct: 349 KLQAADEKARKLKKIVEEKYEENSKRMQELRS---RNFQQLSVDVLH----EKTHLKGME 401
Query: 186 KKKRNPEKTRAQCITKESDEE 206
+K+ PE R C ++ DEE
Sbjct: 402 EKEEQPE-GRLSCSPQDEDEE 421
>gi|225637562 NIMA-related kinase 11 isoform 3 [Homo sapiens]
Length = 599
Score = 30.4 bits (67), Expect = 1.3
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 126 KLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYIH 185
KL +E L + +K EEN KR++ + ++ ++ LH EK + +
Sbjct: 349 KLQAADEKARKLKKIVEEKYEENSKRMQELRS---RNFQQLSVDVLH----EKTHLKGME 401
Query: 186 KKKRNPEKTRAQCITKESDEE 206
+K+ PE R C ++ DEE
Sbjct: 402 EKEEQPE-GRLSCSPQDEDEE 421
>gi|225637560 NIMA-related kinase 11 isoform 1 [Homo sapiens]
Length = 645
Score = 30.4 bits (67), Expect = 1.3
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 126 KLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYIH 185
KL +E L + +K EEN KR++ + ++ ++ LH EK + +
Sbjct: 349 KLQAADEKARKLKKIVEEKYEENSKRMQELRS---RNFQQLSVDVLH----EKTHLKGME 401
Query: 186 KKKRNPEKTRAQCITKESDEE 206
+K+ PE R C ++ DEE
Sbjct: 402 EKEEQPE-GRLSCSPQDEDEE 421
>gi|13514831 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo
sapiens]
Length = 875
Score = 30.4 bits (67), Expect = 1.3
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 174 KIKEKNNSSYIHKKKRNPEKTRAQCITKESDEEL----ENDDDDDLGINVTIFPE 224
KIK K+ + +++ E + Q K+ +E ++DDDDD G + + P+
Sbjct: 743 KIKAKHREKRLKEREARREANKRQAKAKDEEEAFLDWSDDDDDDDDGFDPSTLPD 797
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 30.0 bits (66), Expect = 1.7
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
Query: 102 GKRGKTMLAV---RSTHGLEVPLSHK--GKLMVTEEYI--DFLLNVANQKMEENKKRIER 154
GK+ +ML + + VPLSH GK E ++ +F ++ +K +++
Sbjct: 878 GKKSLSMLHYIRGAAPKDIPVPLSHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQK 937
Query: 155 FYNC---LQHALERETMTNLHPKIKEKNNSSYI----HKKKRNPEKTR----AQCITKES 203
L + T++H I E +SS H ++ P R Q + ++S
Sbjct: 938 HKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDS 997
Query: 204 DEELENDDDD 213
+EE E DD+D
Sbjct: 998 EEEEEEDDED 1007
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 30.0 bits (66), Expect = 1.7
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
Query: 102 GKRGKTMLAV---RSTHGLEVPLSHK--GKLMVTEEYI--DFLLNVANQKMEENKKRIER 154
GK+ +ML + + VPLSH GK E ++ +F ++ +K +++
Sbjct: 982 GKKSLSMLHYIRGAAPKDIPVPLSHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQK 1041
Query: 155 FYNC---LQHALERETMTNLHPKIKEKNNSSYI----HKKKRNPEKTR----AQCITKES 203
L + T++H I E +SS H ++ P R Q + ++S
Sbjct: 1042 HKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDS 1101
Query: 204 DEELENDDDD 213
+EE E DD+D
Sbjct: 1102 EEEEEEDDED 1111
>gi|150170718 zinc finger protein 292 [Homo sapiens]
Length = 2723
Score = 30.0 bits (66), Expect = 1.7
Identities = 36/147 (24%), Positives = 53/147 (36%), Gaps = 12/147 (8%)
Query: 73 LLVTHKLCVKDDVHSMAIDSGFRN----SGITVGKRGKTMLAVRSTHGLEVPLSHKGKL- 127
LL+ K C V + G +N S V + + EV + K ++
Sbjct: 2423 LLIVFKRCCNSQVKETSEQEGAKNDVKDSDTCVSESNDNSRTTATVSQKEVEKNEKDEMD 2482
Query: 128 MVTEEYIDFLLNVANQKMEENKKRIERFYNCLQH----ALERETMTNLHPKIKEKNNSSY 183
+TE +I L+N + +E N Q ER+ +NL KEKN S
Sbjct: 2483 ELTELFITKLINEDSTSVETQANTSSNVSNDFQEDNLCQSERQKASNLKRVNKEKNVS-- 2540
Query: 184 IHKKKRNPEKTRAQCITKESDEELEND 210
KKR EK + S E +
Sbjct: 2541 -QNKKRKVEKAEPASAAELSSVRKEEE 2566
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,205,198
Number of Sequences: 37866
Number of extensions: 344415
Number of successful extensions: 2081
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 2022
Number of HSP's gapped (non-prelim): 109
length of query: 226
length of database: 18,247,518
effective HSP length: 99
effective length of query: 127
effective length of database: 14,498,784
effective search space: 1841345568
effective search space used: 1841345568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.