Guide to the Human Genome
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Name: ZNF610 Sequence: fasta or formatted (419aa) NCBI GI: 239787106
Description:

zinc finger protein 610 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [462aa] zinc finger protein 610 isoform a
alt prot [462aa] zinc finger protein 610 isoform a
alt prot [462aa] zinc finger protein 610 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         19           1
 C cysteine            4.8         20           1
 D aspartate           2.1          9           1
 E glutamate           8.4         35           2
 F phenylalanine       4.3         18           1
 G glycine             5.7         24           1
 H histidine           6.2         26           1
 I isoleucine          3.8         16           2
 K lysine              9.1         38           1
 L leucine             8.6         36           2
 M methionine          1.4          6           1
 N asparagine          6.2         26           1
 P proline             3.8         16           1
 Q glutamine           4.3         18           1
 R arginine            7.2         30           1
 S serine              6.7         28           3
 T threonine           4.8         20           2
 V valine              3.8         16           1
 W tryptophan          0.5          2           1
 Y tyrosine            3.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 610 isoform b 
ZNF610                0.976   zinc finger protein 610 isoform a 
ZNF610                0.976   zinc finger protein 610 isoform a 
ZNF610                0.976   zinc finger protein 610 isoform a 
ZNF480                0.609   zinc finger protein 480 
ZNF528                0.578   zinc finger protein 528 
ZNF534                0.558   zinc finger protein 534 isoform 1 
ZNF534                0.552   zinc finger protein 534 isoform 2 
ZNF766                0.551   zinc finger protein 766 
LOC400713             0.544   zinc finger protein LOC400713 
LOC388559             0.481   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.481   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.481   PREDICTED: hypothetical protein LOC388559 
ZNF347                0.481   zinc finger protein 347 
ZNF160                0.466   zinc finger protein 160 
ZNF160                0.466   zinc finger protein 160 
ZNF160                0.466   zinc finger protein 160 
ZNF83                 0.461   zinc finger protein 83 isoform a 
ZNF83                 0.461   zinc finger protein 83 isoform a 
ZNF83                 0.461   zinc finger protein 83 isoform a 
ZNF83                 0.461   zinc finger protein 83 isoform a 
ZNF83                 0.461   zinc finger protein 83 isoform a 
ZNF665                0.457   zinc finger protein 665 
ZNF83                 0.456   zinc finger protein 83 isoform b 
ZNF83                 0.456   zinc finger protein 83 isoform b 
ZNF836                0.454   zinc finger protein 836 
ZNF415                0.445   zinc finger protein 415 isoform 1 
ZNF415                0.445   zinc finger protein 415 isoform 2 
ZNF677                0.432   zinc finger protein 677 
ZNF841                0.426   zinc finger protein 841 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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