Guide to the Human Genome
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Name: CCNYL3 Sequence: fasta or formatted (351aa) NCBI GI: 239756576
Description:

PREDICTED: cyclin Y-like 3

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt mRNA [351aa] PREDICTED: cyclin Y-like 3
alt mRNA [351aa] PREDICTED: cyclin Y-like 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         20           1
 C cysteine            3.7         13           1
 D aspartate           4.6         16           2
 E glutamate           5.4         19           2
 F phenylalanine       4.3         15           1
 G glycine             3.7         13           1
 H histidine           5.4         19           1
 I isoleucine          4.3         15           1
 K lysine              6.3         22           2
 L leucine            13.1         46           2
 M methionine          2.0          7           1
 N asparagine          3.7         13           1
 P proline             6.0         21           2
 Q glutamine           4.8         17           1
 R arginine            3.7         13           1
 S serine              9.1         32           2
 T threonine           4.6         16           1
 V valine              5.4         19           1
 W tryptophan          1.1          4           1
 Y tyrosine            3.1         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: cyclin Y-like 3 
CCNYL3                1.000   PREDICTED: cyclin Y-like 3 
CCNYL3                1.000   PREDICTED: cyclin Y-like 3 
CCNYL1                0.301   cyclin Y-like 1 isoform 2 
CCNY                  0.259   cyclin Y isoform 1 
CCNY                  0.259   cyclin Y isoform 2 
CCNYL1                0.229   cyclin Y-like 1 isoform 1 
CCNYL2                0.224   PREDICTED: cyclin Y-like 2 
CCNYL2                0.224   PREDICTED: cyclin Y-like 2 
CCNYL2                0.224   PREDICTED: cyclin Y-like 2 
KIAA0664              0.058   hypothetical protein LOC23277 
LOC100132781          0.041   PREDICTED: similar to hCG1647409 
LOC100132781          0.041   PREDICTED: similar to hCG1647409 
LOC100132781          0.041   PREDICTED: hypothetical protein LOC100132781 
AGAP5                 0.020   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP7                 0.017   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP9                 0.016   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP10                0.016   PREDICTED: ArfGAP with GTPase domain, ankyrin repea...
AGAP4                 0.013   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP8                 0.013   ArfGAP with GTPase domain, ankyrin repeat and PH do...
AGAP6                 0.011   centaurin, gamma-like family, member 3 
NLRP13                0.010   NACHT, leucine rich repeat and PYD containing 13 [H...
ETV5                  0.010   ets variant gene 5 (ets-related molecule) 
MYBBP1A               0.004   MYB binding protein 1a isoform 1 
MYBBP1A               0.004   MYB binding protein 1a isoform 2 
DPP10                 0.004   dipeptidyl peptidase 10 isoform short 
DPP10                 0.004   dipeptidyl peptidase 10 isoform long 
GRHL3                 0.004   sister-of-mammalian grainyhead protein isoform 2 [Ho...
GRHL3                 0.004   sister-of-mammalian grainyhead protein isoform 3 [Ho...
GRHL3                 0.004   sister-of-mammalian grainyhead protein isoform 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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