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Search of human proteins with 239755744
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755744 PREDICTED: similar to Putative ATP-dependent RNA
helicase DDX11-like protein [Homo sapiens]
(223 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755744 PREDICTED: similar to Putative ATP-dependent RNA he... 447 e-126
gi|100913202 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 439 e-124
gi|212549538 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho... 435 e-122
gi|100913204 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 338 3e-93
gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 273 7e-74
gi|14042978 BRCA1 interacting protein C-terminal helicase 1 [Hom... 135 2e-32
gi|91984775 regulator of telomere elongation helicase 1 isoform ... 132 3e-31
gi|7706541 regulator of telomere elongation helicase 1 isoform 1... 132 3e-31
gi|15834617 excision repair cross-complementing rodent repair de... 107 6e-24
gi|239743668 PREDICTED: hypothetical protein XP_002342944 [Homo ... 59 3e-09
gi|239745348 PREDICTED: hypothetical protein XP_002343431 [Homo ... 59 4e-09
gi|239740967 PREDICTED: hypothetical protein XP_002342051 [Homo ... 59 4e-09
gi|239745350 PREDICTED: hypothetical protein XP_002343443 [Homo ... 39 0.003
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 34 0.11
gi|5032307 dystrophin Dp140c isoform [Homo sapiens] 34 0.11
gi|5032295 dystrophin Dp116 isoform [Homo sapiens] 34 0.11
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 34 0.11
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 34 0.11
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 34 0.11
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 34 0.11
gi|5032301 dystrophin Dp71a isoform [Homo sapiens] 34 0.11
gi|5032297 dystrophin Dp71 isoform [Homo sapiens] 34 0.11
gi|5032293 dystrophin Dp140 isoform [Homo sapiens] 34 0.11
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 34 0.11
gi|5032283 dystrophin Dp427m isoform [Homo sapiens] 34 0.11
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 30 1.3
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 30 1.3
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 30 1.3
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 30 1.3
gi|166795250 kinesin family member 2C [Homo sapiens] 30 1.7
>gi|239755744 PREDICTED: similar to Putative ATP-dependent RNA
helicase DDX11-like protein [Homo sapiens]
Length = 223
Score = 447 bits (1150), Expect = e-126
Identities = 223/223 (100%), Positives = 223/223 (100%)
Query: 1 MMDEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH 60
MMDEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH
Sbjct: 1 MMDEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH 60
Query: 61 QVEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 120
QVEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI
Sbjct: 61 QVEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 120
Query: 121 RSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQ 180
RSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQ
Sbjct: 121 RSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQ 180
Query: 181 RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS 223
RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS
Sbjct: 181 RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS 223
>gi|100913202 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
isoform 1 [Homo sapiens]
Length = 906
Score = 439 bits (1130), Expect = e-124
Identities = 219/223 (98%), Positives = 220/223 (98%)
Query: 1 MMDEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH 60
MMDEVGRILCNLC VV GGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH
Sbjct: 684 MMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH 743
Query: 61 QVEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 120
QVEQVLLAYSRCIQACGQERGQVT ALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI
Sbjct: 744 QVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 803
Query: 121 RSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQ 180
RSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFAS+VLLDQ
Sbjct: 804 RSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQ 863
Query: 181 RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS 223
RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS
Sbjct: 864 RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS 906
>gi|212549538 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Homo
sapiens]
Length = 906
Score = 435 bits (1119), Expect = e-122
Identities = 218/223 (97%), Positives = 219/223 (98%)
Query: 1 MMDEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH 60
MMDEVGRILCNLC VVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH
Sbjct: 684 MMDEVGRILCNLCGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH 743
Query: 61 QVEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 120
QVEQVLLAYSRC+QACGQERG VT ALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI
Sbjct: 744 QVEQVLLAYSRCLQACGQERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 803
Query: 121 RSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQ 180
RSAELQEKMAYLDQTLPRAPGQA PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQ
Sbjct: 804 RSAELQEKMAYLDQTLPRAPGQAHPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQ 863
Query: 181 RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS 223
RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS
Sbjct: 864 RYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS 906
>gi|100913204 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
isoform 2 [Homo sapiens]
Length = 856
Score = 338 bits (866), Expect = 3e-93
Identities = 170/172 (98%), Positives = 171/172 (99%)
Query: 52 IFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVV 111
IFQEPKSAHQVEQVLLAYSRCIQACGQERGQVT ALLLSVVGGKMSEGINFSDNLGRCVV
Sbjct: 685 IFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVV 744
Query: 112 MVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKD 171
MVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKD
Sbjct: 745 MVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKD 804
Query: 172 FASIVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS 223
FAS+VLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS
Sbjct: 805 FASVVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHREKSASS 856
>gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
isoform 3 [Homo sapiens]
Length = 970
Score = 273 bits (699), Expect = 7e-74
Identities = 136/146 (93%), Positives = 136/146 (93%)
Query: 1 MMDEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH 60
MMDEVGRILCNLC VV GGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH
Sbjct: 684 MMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAH 743
Query: 61 QVEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 120
QVEQVLLAYSRCIQACGQERGQVT ALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI
Sbjct: 744 QVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 803
Query: 121 RSAELQEKMAYLDQTLPRAPGQAPPG 146
RSAELQEKMAYLDQTL PG G
Sbjct: 804 RSAELQEKMAYLDQTLSPRPGTPREG 829
>gi|14042978 BRCA1 interacting protein C-terminal helicase 1 [Homo
sapiens]
Length = 1249
Score = 135 bits (341), Expect = 2e-32
Identities = 73/220 (33%), Positives = 130/220 (59%), Gaps = 10/220 (4%)
Query: 3 DEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQV 62
DEVG +L ++C VS G++CF PSY+ L ++ W GL L K + EP+ +
Sbjct: 674 DEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKT 733
Query: 63 --EQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNI 120
+++L Y I+ G++ G ALL++V GK+SEG++FSD+ R V+ +G+PFPN+
Sbjct: 734 NFDELLQVYYDAIKYKGEKDG----ALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNV 789
Query: 121 RSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQ 180
+ +++ K Y D + G PG+ E +A+NQ++GR IRH+ D+ +++L+D
Sbjct: 790 KDLQVELKRQYNDHH-SKLRGLL-PGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDD 847
Query: 181 RYARPP--VLAKLPAWIRARVEVKATFGPAIAAVQKFHRE 218
R+ P ++ L W+R +++ +TF A+ ++ +F ++
Sbjct: 848 RFRNNPSRYISGLSKWVRQQIQHHSTFESALESLAEFSKK 887
>gi|91984775 regulator of telomere elongation helicase 1 isoform 2
[Homo sapiens]
Length = 1300
Score = 132 bits (331), Expect = 3e-31
Identities = 77/218 (35%), Positives = 116/218 (53%), Gaps = 7/218 (3%)
Query: 2 MDEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ 61
+ +G+ L N+ VV G++ FFPSY + + W L ++ A K +F EP+S
Sbjct: 538 LSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRSKGS 597
Query: 62 VEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIR 121
+ + AY + A G T A L+V GK SEG++FSD GR V++ G+P+P
Sbjct: 598 FSETISAYYARVAAPGS-----TGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 122 SAELQEKMAYLDQTLPR--APGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLD 179
+ KM +LD+ + A GQ G+ +AVNQ+IGR IRH++D+ ++ L D
Sbjct: 653 DPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCD 712
Query: 180 QRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHR 217
R+A A+LP+W+R V V FG I V +F R
Sbjct: 713 HRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|7706541 regulator of telomere elongation helicase 1 isoform 1
[Homo sapiens]
Length = 1219
Score = 132 bits (331), Expect = 3e-31
Identities = 77/218 (35%), Positives = 116/218 (53%), Gaps = 7/218 (3%)
Query: 2 MDEVGRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ 61
+ +G+ L N+ VV G++ FFPSY + + W L ++ A K +F EP+S
Sbjct: 538 LSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRSKGS 597
Query: 62 VEQVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIR 121
+ + AY + A G T A L+V GK SEG++FSD GR V++ G+P+P
Sbjct: 598 FSETISAYYARVAAPGS-----TGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 122 SAELQEKMAYLDQTLPR--APGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLD 179
+ KM +LD+ + A GQ G+ +AVNQ+IGR IRH++D+ ++ L D
Sbjct: 653 DPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCD 712
Query: 180 QRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHR 217
R+A A+LP+W+R V V FG I V +F R
Sbjct: 713 HRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|15834617 excision repair cross-complementing rodent repair
deficiency, complementation group 2 protein isoform 1
[Homo sapiens]
Length = 760
Score = 107 bits (268), Expect = 6e-24
Identities = 75/224 (33%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 6 GRILCNLCVVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQV 65
G +L + VV G+V FF SY+Y+ A W + G+L + K +F E + +
Sbjct: 521 GNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVA 580
Query: 66 LLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAEL 125
L Y +AC RG A+LLSV GK+SEGI+F + GR V+M G+P+ +S L
Sbjct: 581 LEKYQ---EACENGRG----AILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRIL 633
Query: 126 QEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARP 185
+ ++ YL R Q L + M+ Q +GRAIR + D+ +V D+R+AR
Sbjct: 634 KARLEYL-----RDQFQIRENDFLTFD-AMRHAAQCVGRAIRGKTDYGLMVFADKRFARG 687
Query: 186 PVLAKLPAWIR-----ARVEVKATFGPAIA------AVQKFHRE 218
KLP WI+ A + + G +A Q FHRE
Sbjct: 688 DKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHRE 731
>gi|239743668 PREDICTED: hypothetical protein XP_002342944 [Homo
sapiens]
Length = 133
Score = 59.3 bits (142), Expect = 3e-09
Identities = 33/54 (61%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 96 MSEGINFSDNLG------RCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 143
MSE INFSDNLG RCVVM GMPFP+IRS ELQ+ A LD L P A
Sbjct: 1 MSESINFSDNLGQLLSPPRCVVMPGMPFPSIRSPELQKTTADLDHNLVSVPSVA 54
>gi|239745348 PREDICTED: hypothetical protein XP_002343431 [Homo
sapiens]
Length = 133
Score = 58.5 bits (140), Expect = 4e-09
Identities = 33/54 (61%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 96 MSEGINFSDNLG------RCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 143
MSE INFS NLG RCVVM GMPFP+IRS ELQ+ A LD TL P A
Sbjct: 1 MSESINFSHNLGQLLSPPRCVVMPGMPFPSIRSPELQKTTADLDHTLVSVPSVA 54
>gi|239740967 PREDICTED: hypothetical protein XP_002342051 [Homo
sapiens]
Length = 133
Score = 58.5 bits (140), Expect = 4e-09
Identities = 33/54 (61%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 96 MSEGINFSDNLG------RCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 143
MSE INFS NLG RCVVM GMPFP+IRS ELQ+ A LD TL P A
Sbjct: 1 MSESINFSHNLGQLLSPPRCVVMPGMPFPSIRSPELQKTTADLDHTLVSVPSVA 54
>gi|239745350 PREDICTED: hypothetical protein XP_002343443 [Homo
sapiens]
Length = 45
Score = 39.3 bits (90), Expect = 0.003
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 112 MVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPG 146
M GMPFP+IRS ELQ+ A LD TL P A G
Sbjct: 1 MPGMPFPSIRSPELQKTTADLDHTLVSVPSVAEAG 35
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 3562 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 3621
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 3622 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 3672
Query: 150 VEN 152
E+
Sbjct: 3673 RED 3675
>gi|5032307 dystrophin Dp140c isoform [Homo sapiens]
Length = 1105
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 990 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 1049
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 1050 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 1100
Query: 150 VEN 152
E+
Sbjct: 1101 RED 1103
>gi|5032295 dystrophin Dp116 isoform [Homo sapiens]
Length = 956
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 841 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 900
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 901 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 951
Query: 150 VEN 152
E+
Sbjct: 952 RED 954
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 2226 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 2285
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 2286 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 2336
Query: 150 VEN 152
E+
Sbjct: 2337 RED 2339
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 2229 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 2288
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 2289 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 2339
Query: 150 VEN 152
E+
Sbjct: 2340 RED 2342
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 3447 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 3506
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 3507 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 3557
Query: 150 VEN 152
E+
Sbjct: 3558 RED 3560
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 3566 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 3625
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 3626 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 3676
Query: 150 VEN 152
E+
Sbjct: 3677 RED 3679
>gi|5032301 dystrophin Dp71a isoform [Homo sapiens]
Length = 604
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 489 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 548
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 549 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 599
Query: 150 VEN 152
E+
Sbjct: 600 RED 602
>gi|5032297 dystrophin Dp71 isoform [Homo sapiens]
Length = 617
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 502 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 561
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 562 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 612
Query: 150 VEN 152
E+
Sbjct: 613 RED 615
>gi|5032293 dystrophin Dp140 isoform [Homo sapiens]
Length = 1225
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 1110 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 1169
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 1170 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 1220
Query: 150 VEN 152
E+
Sbjct: 1221 RED 1223
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 3447 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 3506
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 3507 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 3557
Query: 150 VEN 152
E+
Sbjct: 3558 RED 3560
>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 33.9 bits (76), Expect = 0.11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 44 GRLAARKKIFQE-----PKSAHQVEQVLLAYSRCIQACGQ---------ERGQVTEALLL 89
GRL AR +I ++ H++ Q+L + G +R ++ +LL
Sbjct: 3570 GRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLL 3629
Query: 90 SVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKAL 149
VVG + S+ + D L P S L+E M L+ + P + G+ PGK +
Sbjct: 3630 RVVGSQTSDSMGEEDLLSP---------PQDTSTGLEEVMEQLNNSFPSSRGRNTPGKPM 3680
Query: 150 VEN 152
E+
Sbjct: 3681 RED 3683
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 27 YEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYS----RCIQACGQER 80
+EY + + W G + G + AR+++F HQ++ +++ IQA G ER
Sbjct: 237 HEYTQAIDL-WSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 293
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 27 YEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYS----RCIQACGQER 80
+EY + + W G + G + AR+++F HQ++ +++ IQA G ER
Sbjct: 237 HEYTQAIDL-WSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 293
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 27 YEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYS----RCIQACGQER 80
+EY + + W G + G + AR+++F HQ++ +++ IQA G ER
Sbjct: 237 HEYTQAIDL-WSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 293
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 27 YEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYS----RCIQACGQER 80
+EY + + W G + G + AR+++F HQ++ +++ IQA G ER
Sbjct: 98 HEYTQAIDL-WSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 154
>gi|166795250 kinesin family member 2C [Homo sapiens]
Length = 725
Score = 30.0 bits (66), Expect = 1.7
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 20/99 (20%)
Query: 61 QVEQVLLAYSRCIQACGQER-------GQVTEALLLSVVGGKMSEGINFSDNLGRCVVMV 113
++ + LLA CI+A GQ + ++T+ L S +G +N C M+
Sbjct: 515 EINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIG----------ENSRTC--MI 562
Query: 114 GMPFPNIRSAELQ-EKMAYLDQTLPRAPGQAPPGKALVE 151
P I S E + Y D+ +P P G+ L++
Sbjct: 563 ATISPGISSCEYTLNTLRYADRVKELSPHSGPSGEQLIQ 601
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,638,894
Number of Sequences: 37866
Number of extensions: 354735
Number of successful extensions: 875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 843
Number of HSP's gapped (non-prelim): 43
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.